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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000301:157545..163209+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00627.0 ID=Blg00627.0|Name=Blg00627.0|organism=Branchiostoma lanceolatum|type=mRNA|length=5665bp|location=Sequence derived from alignment at Sc0000301:157545..163209+ (Branchiostoma lanceolatum)
TGTCGGTAAGTTTTAACATTGACAAGGCAAAAGGGGAAAATATCCTACTA
AATCAGTTCTCCATTTTCGTTGCGTTCAACACTTGCTGTAACTACCGTAT
CGCGGCTTTGTTACGCCACGGCCGTTTGAATCTCCAGATGGAACGTCATT
GACCGAATGTGATTCCAGAACGCCTGCTGTTGCCTTGACTACCACTTGAG
ACCATATGTGAGATGACAATGCCAGAGTGGAGTTTCACATGTAACACAGT
TACTATGAAACTTTACCTAAGAACTATCGCGGTCGTGTTCCTGGTGGTTT
TGCAGTTCAACTCTAGATATGTCCTGGCTGTAGAAGGTATGGACTTCTCA
CCTTTTCGAGTGCTCGATTTGGCATCGTTTAGTTGCTTTATACCTTTATA
TTCTATTACCATTGACATACTTATTTACTTTTGTAGAATTCAGATAAATG
TTGTCTCCGTACGCGTTGCACTAAAGTTTATCTGTTTGTCAGTGTTAGTT
CGTTTCTTGCTGATAATGATAGGCAACCTCCAATGTACATATACCACATC
TGCTTAGAGATTAATTTTAGCCATATACTTTCCAGAAACCGGGCGGAGAA
AGTGGTCCACGTGGTCGGCGTGTTCCCAGACATGCGGCGAGGGCGTGAGG
ACGCGGTCTCAACAGTGCCATGGCTCGAACTGCAGAGCCCACCAGTCCCG
CCAGGGGTTCCTACAGAGCGCACCGTGCCACCAGGAGGCGTGTCTTGGTC
AGTGGGAAGAGTGGGGAGCCTGGGGCGACTGTAGCGTGTCCTGTGGGTCC
GGTGGCAGGATTCGTACCCGTGTGTGTTCTACTGGGGCAGGGCAGTGTGA
GGGACCCGACACAGACACCGAGGAATGCAGCTTCGCCGCCCCCTGTCCTG
CTGAAGGTACAAGCATGTCGATGGCAATCAACCTCTCTTCCAATATGTTT
CAATATCAGATGAATAAAAATCATACCTCAAATTTCCTTTTATTCTCTTT
TTATGCTAACATATAAAGATATCAAAGTCGCGTTGCCAAAATAATCCAAT
ATGAGGATAAGTCGGGTACGTTCAGTCAAATCAAGGCTAGCTACAGCCTA
CAGACGAAATAACAACTTTCTGTTCTGGCGGTTATATGATCTTTGGCTAT
ATTACGGATCCAGCTACTCTTTAACAAACAAGGGTTGGATGCATGAGAAG
AGTATTGCCTTATTTTGACTTCCCCTTTTTCTAAACGTTTCCCGTTCAAC
CTCTGCTTGGAGAGTGGAATCAGTCTCATTTCCTACTTTCCAAACGTTTA
GAAAATGAAGCTAAGAAGATGAAGACTATGTGGTCGCCTTGGACATCGTG
GAGTAACTGCAGCCAACCGTGCGGCGCGGGTCTGACGTACCGGCGGCGGG
TCTGTCTGCAAGGGTGCCGGCAGCACGGCGTGCTGGAGGAGTCCCGCGTG
CAGAGGAAACTGTGCAACACGCAGTCGTGTCAGAACAATGGTCAGTATGG
CAAGGCTTATCTCCAAGCATATTCTCAGCATATGGAAGTTCACCTTGTGT
CGGTATATAACATTACTGAAGAGTCAAGTTCAACACAGGAGAATGGACTT
TGGTCTTCTTCAGGATGACTGTCAACCCGATTGCTCAGAGCACGTGACCT
AACATGAGCACTGGGCCAACGATGGTTGGAAGTTCACATCGTCCCCCGTC
CCCGCCCTCTGGTAGTTTCTACCAGATTAGTACTCCTTTAGTGGCTGAAA
CAAAAACAAAATTGACCAAATAGAGTGAATAATTTGCTCTACATCATGTT
TTACTGGTACATTGTACTTCTATAGCCAGCTGCCTCCTCAGTCAAATTAT
TACGGACAAATTTTACTACTTTTACTACTAGTCTGATAGAGACTTACATA
CTTGCCTGGACACAGACGAGGGGCCCGGGGACTTTCAACAACCTTTGACT
CATTGCTCACGTCTTTGCAATAAATTGTTGACGTAATCATTTTATGTGTA
CGAAGGATAGCCTGATTTCACAACATCACTAGGACATCTTCTTTTGCAGA
CAATGTTGACTTGAACCCCCATACTGACAAGCACAAGACGGAGAACAAGC
ACAACATCATAAACACTGTAGAAGTTGCTGCTAGTAACGACAAACTGGCG
AGTTATGACAAAGCAGAGCCGACGTCACGTGGGCATTCAAAACATCATCA
CAGAAGGAAGACTAAGAGAGGAGGACTGGGAGGCGGGTACCGAGGACCGA
CATCATCAGTGACGCAGGAGTCACGTGAGCAAGCGGATCTAGAAGCGCTT
CTGACTAAGATGAAAAGTAAGTTGTGGGGAATAATTGTCGGAAATTGATA
CATGAAAATTGTGGGAAAATATAGAGTGTTCTATTCAACATTCTTGACAA
TTGGAGATATCAGGTAGCGATCATGTATCTCAATTCTAATCTGTAGCAAG
CAATGTATTTTTGTGTCTCACCTATAAGGTGAACTAACCATGCGTACCAC
TTAAATACGGCGTATACAAACGCCATTACAAAGGTGTGAAAGAAAAGCCA
GAGGAAACATCGAGTACGCGTATCTGTTTATGACGACTGTTTCTTATTCA
GGTGGGGATGTAGCTCAGAGGTAGAGCGCTCGCTTCGCATGTGAGAGGCC
CCGGGTTCAATCCCCGGCATCTCCAAATCTTCTTTTTGCCATCATCGAAA
CCGATGGACCATCTATTATTGGGAAGGACAAACTACCATCCTGACTCAGG
GCTGCCCAACCAGCCGGTGGCTACTATTATAATTACAAATCGAGCCGCCC
CATTACTTCAAAGTTTCAAAGTGAAGGTACATGAAGTCACCTTTACAATT
TTACTTGCCAACAACAGTTGCAGTGCACTTGTTTTCTCACGCATGCGTAG
CATCACTTGCAACTTGGAGAGAGTAGCTACATTTATTGAGCCAGTATTAG
ACAGCCGAGCGATACACAAGGTGTTTATGTTACAGAGGCTATAAAACCTC
GAGCTCCTTGCTTTAGGGAAAGCCAAAATGATCGGTTGAACGCCATTCAT
CCTATGTATTTATGTATTGAACCATATGACTCCTAGTCTGAAAATAGCAT
AACCAACGCTGCTGCCAAAAATGAGGTGGAACTGCAATAAAGCAAGCCGC
GATCCGAAAACTAATTATAAAGCGTTTCGGAAACAAATTGCTGCTACCGA
ACAAATGAATAGACAATTGACAAAGATCTTTTCTGTCCTTCGTTTTCGAT
GAACACAAAAAGAAGATTTGGAGATGCCGGGGATTGAACCCGGGGCCTCT
CACATGCGAAGCGAGCGCTCTACCTCTGAGCTACATCCCCACCTGCGAAA
TGCATCGTCCAATCAGACATTGATTCCGGTTTGTTTTTTCACGCATTTTC
GTGGTGTTTGATTTGTATATTGTACGTCTTTGTAGCAGACAACTCCCAGT
TCACATTAGGCGAGGTACAGATTTCATTGACCAGGCGTAGTTAGAGGGGG
GACTGACAACCTTCCCTCGGACCAAGACAGACTCTCCTGGCCAATTATTC
AATTTTTGCCGAATTCTACTATCCATGCACCTGTTGAAAGGCCTGATGGA
GGCTAAAATCGTTCGCTCCTCGTTCTTACAGAGTCCAACAGGTCATAGGC
TCACGGCGTCTTGTTTTATTTCCCAGCCGCGTATGGGGGACACTACCAAC
AACAACAACTGGGTGGAGAGTTGGAGGAGTGGACCACGTGGGGTTCGTGG
GGCGCATGCTCCAAGACGTGCGGCGCCGGAACAGCCGTCCGGATCCGGAC
CTGCTCCGGAGGGAAGTGCGCGGGAACGTCCGAACTCTCGCAGCAGAAGT
GCCACCTGGCGGATTGTGGTAGGTAGTTCAGGCACTTTTGAGTTCCAGAT
TTGAGATTTTGAGACTATGAATTTGTTTTGAATCTCCACTAAAATTCTTT
AACATAATACGTTAGTTTCGAAGGAAAGTTATGATTAGCATACGTTGATG
TCTATTATATACTAACTACATTAGGAAAGCACACTGTTTTAAAGATAACG
AGTAAAGATTAAAGATAACATATTGTTTCCAATATGTACATGAATGGATC
CCTTCACATTAAAAAAATGGCAGGATAAATATACCTACTTATTCTATAGT
TTTCAGAATGTTTCGGTTCTTTTCTGTATCACATTTCTGTATCTAACTTT
TCATAACAAAATGTGGCCCAGCTGTTTTTCTACTTCTTTATCTCCTCTGA
AACACATATACTGTATACAGTTAACAAACTTTTCGTACCATCTTTTTGTG
CAAGGCAGCATATGGATTTATCATAAGGGTTGCTAAGTTGTCTATTAGTA
AGAAGCTCAATTTCCTTAGGGGGCTGTCACACTAGCATATATCAAGTCTA
TATTGATATCCGTATCAATTATCTTATTGTGTTATTCTGCAAATTTGAAA
TACATCCACAGATACTATAGTTACTAAACAGTCAGAGAATATTCCACATC
AATCCATGTAGAAAAATACTTCAAAGCAAGATATGTCCTTTCATTAAAAA
AATTGATACAGAACTTATACGGACTCGTAGATATACAGACTCTGACAGTT
GTCTGTATGTGCTGTTGCAGATGTGAGCGCTGTCAAACCAACAACCGAGG
TCCCATGTTACGACACCTTGTGTGAGCAGAAGAAAATGTTCACGTATCTG
AAGACGAAGGTGGAAGGTATGCATGTCATAAACACCTGAACATTTTGTTC
TAACTCTGCAAGATTCAAGCATAATTATTTCCCCTGTCCAAATTATAGAA
TGATTTTGGAGTAGAATCTAGGCCCACTTTCTACGACATAGTTCCCCCCA
GTTTTTATGATGTATTTTATATCAAACTGTCCTTTCTATGACCACAAAAG
AAGCAGGCCTTTAAACACACATATCTCATATTACAGAAAAAGTAGCATCT
TTCTTCTTCCACTGTGAGTCAAAGTTTAGAGTTAGGATAGAGCGTGTCAT
GTGATATTGCTCTTCATTGCTTGTTCATCTTTGTCCTGTTTCTTGCAATT
AACCTTTGGGTAAGAAATTGCAACAAACTTGTGAATCCCTGGGTAACTCA
ATATGAGCTCAACTTTGTTGAAAAGTAGCCAAAGGGCCGAATAATGTCAT
TGATTATAGCTTTTCACCTTGTCTTACATACCTATAATGGAGTACAAACA
GATGCACTCACATATCACATCCATACTCACACACCAAAGAGCATACACAG
TACCACACATATACATGTACACAGCATCGCAATCATATCACACACATAAA
TCAATACACATTTTGTTATATTACACATTCATATACACAAACATGCATAT
GCACATACACACACACCTGTGCACACAGATAAGGTGAAAATCCCGCCTGA
GTTAAAGTACCCATGTCTTGCAGAAGTCCTACAGGACGATGGGAAGTTGC
TCCAGATGTCTAAACAAGCCGAGTACGAGGTCCCTGCGATCCTGATCGGT
ACTATGATCCTCCTCCTGGCCATCATCATGCTGTGTATCATCAGATGTGT
GGACAGAAAGATGGAGGAAAACAGGAGAATAAAGAGGGAAGCCAAGCGGA
AACAGAAAGAGAAAAACCAAGTCGGCCTGCCGTCCACCTCAAGGTCCTTT
ACATCTATGAAGTAG Coding sequence (CDS) from alignment at Sc0000301:157545..163209+ >Blg00627.0 ID=Blg00627.0|Name=Blg00627.0|organism=Branchiostoma lanceolatum|type=CDS|length=1431bp|location=Sequence derived from alignment at Sc0000301:157545..163209+ (Branchiostoma lanceolatum)
ATGACAATGCCAGAGTGGAGTTTCACATGTAACACAGTTACTATGAAACT
TTACCTAAGAACTATCGCGGTCGTGTTCCTGGTGGTTTTGCAGTTCAACT
CTAGATATGTCCTGGCTGTAGAAGAAACCGGGCGGAGAAAGTGGTCCACG
TGGTCGGCGTGTTCCCAGACATGCGGCGAGGGCGTGAGGACGCGGTCTCA
ACAGTGCCATGGCTCGAACTGCAGAGCCCACCAGTCCCGCCAGGGGTTCC
TACAGAGCGCACCGTGCCACCAGGAGGCGTGTCTTGGTCAGTGGGAAGAG
TGGGGAGCCTGGGGCGACTGTAGCGTGTCCTGTGGGTCCGGTGGCAGGAT
TCGTACCCGTGTGTGTTCTACTGGGGCAGGGCAGTGTGAGGGACCCGACA
CAGACACCGAGGAATGCAGCTTCGCCGCCCCCTGTCCTGCTGAAGAAAAT
GAAGCTAAGAAGATGAAGACTATGTGGTCGCCTTGGACATCGTGGAGTAA
CTGCAGCCAACCGTGCGGCGCGGGTCTGACGTACCGGCGGCGGGTCTGTC
TGCAAGGGTGCCGGCAGCACGGCGTGCTGGAGGAGTCCCGCGTGCAGAGG
AAACTGTGCAACACGCAGTCGTGTCAGAACAATGACAATGTTGACTTGAA
CCCCCATACTGACAAGCACAAGACGGAGAACAAGCACAACATCATAAACA
CTGTAGAAGTTGCTGCTAGTAACGACAAACTGGCGAGTTATGACAAAGCA
GAGCCGACGTCACGTGGGCATTCAAAACATCATCACAGAAGGAAGACTAA
GAGAGGAGGACTGGGAGGCGGGTACCGAGGACCGACATCATCAGTGACGC
AGGAGTCACGTGAGCAAGCGGATCTAGAAGCGCTTCTGACTAAGATGAAA
ACCGCGTATGGGGGACACTACCAACAACAACAACTGGGTGGAGAGTTGGA
GGAGTGGACCACGTGGGGTTCGTGGGGCGCATGCTCCAAGACGTGCGGCG
CCGGAACAGCCGTCCGGATCCGGACCTGCTCCGGAGGGAAGTGCGCGGGA
ACGTCCGAACTCTCGCAGCAGAAGTGCCACCTGGCGGATTGTGATGTGAG
CGCTGTCAAACCAACAACCGAGGTCCCATGTTACGACACCTTGTGTGAGC
AGAAGAAAATGTTCACGTATCTGAAGACGAAGGTGGAAGAAGTCCTACAG
GACGATGGGAAGTTGCTCCAGATGTCTAAACAAGCCGAGTACGAGGTCCC
TGCGATCCTGATCGGTACTATGATCCTCCTCCTGGCCATCATCATGCTGT
GTATCATCAGATGTGTGGACAGAAAGATGGAGGAAAACAGGAGAATAAAG
AGGGAAGCCAAGCGGAAACAGAAAGAGAAAAACCAAGTCGGCCTGCCGTC
CACCTCAAGGTCCTTTACATCTATGAAGTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00627.0-exon-Sc0000301-1570713199:157545..157880 | Blg00627.0-exon-Sc0000301-1570713199:157545..157880 | Branchiostoma lanceolatum | exon |
| Blg00627.0-exon-Sc0000301-1570713199:158130..158450 | Blg00627.0-exon-Sc0000301-1570713199:158130..158450 | Branchiostoma lanceolatum | exon |
| Blg00627.0-exon-Sc0000301-1570713199:158846..159034 | Blg00627.0-exon-Sc0000301-1570713199:158846..159034 | Branchiostoma lanceolatum | exon |
| Blg00627.0-exon-Sc0000301-1570713199:159594..159860 | Blg00627.0-exon-Sc0000301-1570713199:159594..159860 | Branchiostoma lanceolatum | exon |
| Blg00627.0-exon-Sc0000301-1570713199:161221..161412 | Blg00627.0-exon-Sc0000301-1570713199:161221..161412 | Branchiostoma lanceolatum | exon |
| Blg00627.0-exon-Sc0000301-1570713199:162165..162260 | Blg00627.0-exon-Sc0000301-1570713199:162165..162260 | Branchiostoma lanceolatum | exon |
| Blg00627.0-exon-Sc0000301-1570713199:162968..163209 | Blg00627.0-exon-Sc0000301-1570713199:162968..163209 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000301 | genome | Sc0000301:157545..163209 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00627 |
|
