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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:7433361..7441486- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00685.5 ID=Blg00685.5|Name=Blg00685.5|organism=Branchiostoma lanceolatum|type=mRNA|length=8126bp|location=Sequence derived from alignment at Sc0000003:7433361..7441486- (Branchiostoma lanceolatum)
TTGTTTGTGTAACTGCTTTTTTGGCGGATCAATAATTTTGTTACGTCTCA
GCAACCCCCCTCCCCCCTCCTCCCTCCATACCTGGTGAACTCCTGGTGTA
GTTCCCTAATGCCGGCCTCGTCCTTGTGCCCGGTGAACACGATGTTGCAG
CCGTTACTGGCCAGTGCCCGGGCGATGCCCAGTCCGATCCCGCTGGTGGA
ACCCGTCACGATGGCTGACTTTCCAGACAACGGCTTCCCTCCCTGCGACA
TGTGTCTAGAACAAACATTGTTTATTTAATACACTTAAGGTTCGTGTTTT
TTTTATGTTGACCCAGTTATATCTTTTCCATGTCCTAGTCACGTTCAACC
TAGAGTAACAGGAAGTGATCAATGGATGTATGTAAAACATTATTTACATA
TGTTTAAGTTTCAAGGCTGCATAATCAATGAGGTTGTATTAAACTACTTC
TAAAAGGAAAATGATCTCGGGAATTTGATTTCGTGTTAGGGAGAAATTGA
GTGTTCGCAATTGTTTTAATTTCGCGGTTAAAAAGCGGGTATGCGGGGAG
AATACAGAAGAATCATTGCGTCGACTTTAAGTTTCCGATGAAAATTTCAT
CACGAATTTTAAACCACCCCGAAAATTTCCCATTTCAGCGCACACAACAA
AGGGAGGGTTGAGATCTTCGAACTCTTGTTTCTGAATCCTTGTGAAGCAC
ATATAGACGTGGTTGAAAAGTCCTTCAAATTGCCTTGATATTGCAACGTA
GGATTAAATACTCAGTTGTCAACGAAAAAAACAGGAAAGAAAACAATAAC
TATTTTTGCAAAGGAGGAATGAAAGAATAAAATATATAAGCCATATTTTT
GGTCAGTATTATAAGAAGGCACACGTAGAATTTTCTTATCGTTTTACTTT
GTTTTGAATTCAGCTTTAGGGGTCACTGCCCTTGTGACACCTGACAAACT
GCCATGACACCTGTTGCTAGCTGACCTTTGACCCTACAACTGGTAACATC
CGGTTGTTGTTTGAACAGCCGCTTGCGTGAGTAAACTATGTGGAACAGAC
TGCACGTAACACATATTAAGTAGACGGATATACCATGCTCTTGCATATAT
ATAAAAAAGCATATTACTCGCCCGTTCTGGTGTATATTATATAATCAAAA
TGATATGACAACAACAAAGAAATTATGATTTAACCACCAAACCGGGCTAG
CAAAAGGGAGAGAAAAAGAGTATACACAGGAATAAAAGTTGCAGAAAATG
TACCGGTACAAAGGTGCTTTTGCTATGAAGTTGACTTTTTATATCTATTA
TTCATATCTTTGTCATACATGCAAACATACGATAATGTTTTTGTGCATTG
ACCTTTGCACAGATACGGCTAATTTAGCTGGAGAAATGAAGGAACATACT
TCTACAACGAGGTTCAAAGATACGTTGAATTGTTATTATCGATCGTTTTA
GCACAAAAAACAACACTTGTGAATTCCTGTCTTTCATACAACTACACGAG
ATACCCCCAGAGACCAGTATACACAACAACATGTCGTCCGCAACAGGTGT
TTCAATAATTCAGGGATCGATCGATAATAGTCACAGACTGGATCCGCTTT
TTTTTGCAGGAATTTTCGTTATATCTTCGCGGAGATAATATCTATAACTG
AATTTGCACCGTTACGTAAATTAAGTGAAATATACACTTAGGGGTCTCAG
TATGATCTTTTACGGGGGGGGGGTAATTTGGGGGAAGGGCGTCCAACCCA
CAACCCCACCCACGCTCCACCCAGGTATTGTCGCCACGGGCCAAGTGAAG
AGTTGTATGTACTGTCCACGTAGCTTGTGCCTTAAAAAGTATTGCATCAG
TCGTAGTTGTGAACTTTCCAGTTACCAAATTATTTTCAAAGTATTGCATC
AGTCGCAGAGGCTTACAGTTTAAACAACCTCAGACAAGGTTATTCAAATA
TTTCATTCAAGTGTTTGCGTACTGTACTGTAAATAGTAATATTTTTTACA
CGATGACAATGAAAAAATGGCTTCAATAGCAGATCATGATGAATATCAGA
TGTAGTATCCATTTTTGTAAGAGCGTAATACACTAAGCAATTGGGCAAAA
GTTAGAAAGTGGCAGGCTTAGTTCTTGTAATCTATAACTGCTCTATACAC
ATTTCGATGTCATTAAGGGCCATCATAATTTTAGTTACCTTCAAACTGCA
AACATTACTTGGATCCCATATACTTAAAGAAAGTTCACTTACCTTGAGAC
GATGAAGCGAGATCCCTTAGATTCAACTTGCAGTCTAACCAAACACTGTA
ATGATCGTCTTGCCAGAGCCGCCATCTTGAAAAAATGTGAAAATACCAAA
ATGCTTTCACTCTTTTTATACTGTCTAGGGGCTATTGTGCCAAAATCAAT
AACACCAACGCTTTCGACCGGAAGCAGAAAGAGGATAAGCTTCGCACGCC
TTGTTTTACATCCGGGTTCAGATGTATTATCAGTAGAATTTCTACACTAG
ATTGAAAAGTAGTCTGTAAGTTTTGGGCGTGTTGTGGTGAAATACACATT
AAAACAACTTACGCTGACATGGAATTTTAGCGATGCCAGGCAACGTTAAC
TCGTGGTATTATTGCATCATTCTTACAAGTTAAGTAGGTTCCCGAGGAAA
CAATATGACGTCACCATCTCTGAGCTCTAGGTAGATCCGGTTTAAACAGT
GCTAGGTTGATGTTTGCCAAGCCGGGCTTTGTCAGGGGAACGTTCGTTTC
ACATGTACGGGCGGTCTTAAATTGCAATATCGCTGTATCAACAGTGCTAG
ATAAGAAATATAACATGTATAGCATCAGTGACAACGGTGTCTTTCGCTAG
ATAGGTGTCAATTGACTCGCTATCGTTACGTAAGTGAGAGAGTGAGTGAG
TGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGGATC
GAGCAGAGTCTGTGAATGAATGGGTGAGTGAATGATAGCAAATATAACCA
CCAGTATTTTGTCTTGACACCTACAACTGGGTTTACGTTTTCGTAAATAT
CCTATTGTACTACGTTATCATGCATCCACAATTTGTAAGATAAATCTGAT
ACAGATATATGATAACATATATATATATACAATGGTACAATAATGAGCAA
GTATCAGGGCAGTGGTCATCGTAAGCAGTTTGCTCTCGATTGTTTGTTGG
CATGCAACAAGAGCCATCTAGCGATATCAAGGTTAAACGCAAGATAGACC
GTTTATAGCGTGAAGGAAAGGTAAGCTATGCTAAACTCGCTCTATAACAT
TTGGACCTTGACCCGTGTAACAACAAGAGTCCTTACAAAGATGGCGTCCT
TTATTCGTATCGCCAAGACATCATCCTTTGCACGATATACACGGATAGCC
ACTGTTACGGCGTTTGCAAGGTAATACGTACAAACTTTTCGCCGTTTGGA
AGATTCATCGGGTACGGAGCGCTTGTACATGTGTGTGTGTGTGTCTTGTC
GCACGTAGGCACTGGATATCTGTGCACGTTGAACTAAATTCCCTCAATCT
CCAAGCAGTTATAGGGTCAGGTTCAGTGTTTTACGAGTGCTATAACACGG
ACCTTATAAAAATCTGATTAGAAAGAAGACGCCACTAACATCGACCGTAG
CGATTGTTGCAGGGCTTGCTGTCTTTTATATAGCCCGGTAACCTAACATA
AGTGACTTTTAATTGATGTTGGGGATGAATGTTTCGCAATCGATAATCCA
AGCTTTTTTAAATGCTCATGCGAATAGATTACAAACAGCTAACATTGGCA
AAAACAATTGCTATATTTGGTTCAGAGACTGTGAGTCGACAGAATTGAAG
AACTAAAGTCTTACTGTATGTCGACATTCTATGAGTAGGTAAAAGTAGTC
CCATTGCCTTTTTGAGGCCGTATACCGGGCAGTGGGTTATTAGCCACTGT
GTCTAGGGCACGGCATTGGAAGGCGGAGCCCGACCCCCTTCTCTCCCTTT
TATCTCACCAACTGAAGCAATGTACCCATTTTTACACCTGGGTGGAGTGG
GGACTGGGAACGTCGTGTTGAGTGCATTCATCATCATCATATCGGGCAGC
TTGCCCGGACTAGGGTTGCTCTTTCCCTCCAGTCAACACGGTCCGCCATG
AGTGCATTACATGACAGGATTCAAACCCAGGACCTCGAGATCTGAGTTCT
GGGCCAAAACACACTGCCCTTACGCCACACGACTTCTGTAAAGAAAAGTG
TATTTTCAATGTCATGTTATTTGTCAAATTTGCAGGCTTACATGTTTGTT
TAATCGTTTGTTTATCATGCATTGACCTGATCTAGAAGTAGGTAATTTTT
TTTTAAAATCAAGCGGTTGTTAGAGTAAAAACATGCTATTAGTACTAAGC
CTCAGAGTGTATTTAGAGGTGCCATTGGTTTTGTGTCAATAGTAGCTGCC
CTCGAGTATGCATTGATATATGCCTTTGGGTTTGCACTGATAGGTGCCTG
GGAACCCATCCTGCCCCCCTGAGGGGTCGGTCTGCCCTGGTGACCGGGTC
TACCAGCGGCATCGGACTGGGGATAGCTCGGGCACTGGCTGAGAGCGGAT
GTGACGTCATCTACACGGGTTTCGCAGACGAAAAACTCTTAGCTGACCTT
CAGGAAGACTTCCGGTTGGTTTGATCACTTACTTGACCTTCTCTTTCTTT
CCCTCCATTTAAATCTGATTTACAATCAAAACATTTACTTTCTATCCAGA
CACGGCATTATGGCTTCATTCAAAGGTTCACGAAGACTTCCGGTTAGTTG
GATCTCTCTCACTCCTTTTATTCGTGCTTCTCTCCATCTCTCTATTCTTC
ATCTGAAGGGTATTATATAAATGCGTCATGATCTTTTGATGATATTACAT
TAGAATGAGCTCTAAAATATTTCATGTAGTGTCACATCTTGAACTTGAAG
TTGGTTGCCAGGAGGCCAATGATAAGCCTAAATATCATTCTAGTTCCAGC
GCCCCCATACCCTCACTTTATTTTGTGAAGAGAGAGTATGGGTGCCTATA
TGGTGCCATGGAACTAATTAGGATGACACTAGGCTAGCCCATTGATAACC
TTGGCCTTTTTCTTTACATAACCAACCCACAAGCCAAATATTTTTACAAT
CCATCCGACCTTTGCAGAAATTACAACGGTGTAAAAGCCACTTACATGCC
GGCAGATCTGACAAGGCCTACGGAGGTAGAAAGATTGTGTACGGAGACGA
AGAGACACTATACGGACGGGGTGGACATAGTAGTCAATAATGCAGGTAGG
ATCATTGTAGTTCTGTAGTGACGTCATCTTTACCTTCGCGTTCAGAGCCT
TTGTTTTCAGTGTCATCATCAGCTCCTTTACATCCTGCCGGACGATCAGT
TCGGCGTCGGTGGACTCGTGTATGTGTTTATTTACTGTAGTTATTTGCGT
ACACTCTTATTAGAGAGGCAGGAAGTGAGTGAGTGAGTGGGGAAAATAAC
CTTAAGGTCACTGCAAATGTCAAACTTACGGAAGTAGAGTTCGTAGGTGA
TAGAGCCTGTCGTCAATAAGACATAACAGCCAACCCAGGTCATGGGGTCA
TTCATGTATCATGAATATATCAGATGTCCTAAATACACCTCAACCTGTCT
ATCTTAGGATTTCAGCATACGTCACCTATCGAGTCGTTTCCCTTGGCAAC
GTGGGACGCCATGATGGCCGCCATGTTGACCGCACCATTCCTCATAATCA
AGCACCTCCTATCTGCCATGAAGGCAAAAGGTAAACTTGTCCACACCTGT
TTGACTCCTAAGACTATAGGAATATATTTTTTAGGGTTGTAAGATTTATT
GTACCTAAGGAAGAAAGTTTTGTTGTTGTTGTTCGGTGCAAAACCACTCT
TTGACTTGATCTTTACATTATTTGTAAATCGATCGTGGTATTTCTTTATA
AGCTCCACCCCTGAGGCGTTGCTAAAATAGATTTTTTTCATTCCCACTTT
TGTTCCAGGATGGGGAAGGATAATCAATATTTCCTCAGCGCACGGGCTTG
TGGCGTCTGTGGAGAAATGTGCGTATGTGTCGGCGAAACACGGCATCAAT
GGACTGACAAAGGTGACTAAGATGAAGTTAACACACTCACTCACACACAC
ACACTCTCTCACACACACACACACACACACACACACACACACACACACAC
ACACACACACACACACACACACACACACACAATGAAGCTCAAACCCACTG
GATTCAAACCTACTGGCCCGAACATACACAAACACTTGTATTGTGAAGTA
TTTAGCTAGGTAGATTTACGACAAAGTTGTATGTTCTAACATGTATTGTA
TATGTAGTGTTTATGTGTCTGCTTCTGCAAATAACGCTTCATATACCGCT
TTATCCAACAACGCATTTTCTACTTAGACGCTGTCAAATTCGTCATACGA
TCGAAAACTGACATGATAAGTTAAACATTCTTGGGATATTCCTGCATGTT
TTCATGATGCAAAATTCAGCTGTTTTGATCCTCTTCGGCGGTTGGGTATG
TCACCGCTTTCTTAAAAAACCTGCAACATAAAAACCGTACGACGGCCTAC
GACCGATGTGATTACACTGCAAAGATGCTGTCAAGCATCAACAGGTATGA
TGGTCTGTTTGTAGGTCGTTGCCTTGGAAACGGCAGGGACCGGGGTCACG
TGCAACGCCGTGTGTCCCGGATGGGTGCTGACACCACGTGAGTACTTCTG
CCTCCCAAAATGGCGGCGTAACGTAATTAGCATTACGCGAGGAAAGTTAT
GTCTATGTTTAACATTATGTCTAAGAAAATATTTTCTACGTGAATTTAAT
CATCATAGGTAGAACCTTAAAATTAGACTTAAGAGGTCAATTCTTTATTT
TCCAGTCGTTGAAAAACAAATCCGACAGTTGATGGAAGATCACAACATAG
CTTGGAAAGACGCACAGGTATCTTGGATTCTTAAAACGAATTCGATAACT
AGAGAATTTAAATTGTGATAAGCATTAGTATTAAGACAACATTATCTTCT
CGAAGTTTATAAACGAAAGGAGTGTACAACTAACGAAATCAAGCGTTGGG
GATATGCTTGCCATTTCGTCTTTGGAAGTACTTTAACTGCATTCAATTTC
ACGATAGTGAGTGTTCGCTAACATCTCTCTCCTTTATGCATGGTATTTCT
TTAAAATGGGTGCTAAATTTCCACTTTCTCCAAGACGATGCTTCTCTCAA
GAAAACAGCCTTCCAATGGCTTCGTGACTCCCGAACAGGTAAGGAAGAGC
AAAACGTTGTTTTTTTAATCTTTTATTTTCCTTTTTGATTCGTAGCCTTA
TTCAGTGCCACATGTTACTTGAAAACGTATTTGAAAAGAGAATATGCAGT
TGACTGCAGTTTACAAATAACCCGCTAGGTACAAAGTAGTATCCAAAAGA
ATAGCGTCAAGCAGAAATGTATCAAAATTTAATTCTTTTCCATTTATTTC
AGATTGGAGACATGGTAACCTTTCTTTGCTCCCAAGCAGTCAATCAGATG
ACAGGATCCATCCTTTCCATCGACGGAGGATGGACAGCGCAGTGAAAGGT
CCTCTGTCATTGGTCTAGACCAAGACATAGTCACTCCGCTTCAACATTTT
TCTTGATTTTCAGTGTTCATTTCATTCATTAAAACACAAAAATAAATACC
TATGGTGGTGCCGTATTCAAGCCACAAACTTATCTTAACGTCAGCAGTAA
AAATATACACAGTTCAATACAATAAAACGATCAAAAGTTGCTCATAATTC
GTCTCGTTATTCATAACATATAAGCTTACCATAACATTACACATAAGATA
CACATGATACACGTTATTTGCATCCGAAACACATCACAAGGCTTTTGCAG
TCTTATAAACCTTCTTATTTTAATATTCTAACATGTTACTTATCTCAAAT
GTAAAAATATAAAATGACACATCATAACATATATATATCTAGTATGGATA
TACTCAACAGCTATAGACACAAATGAAATTTAAAACGCTATTAAGGTAGC
AAAACTGAACGTCCAGTTTAACAACAAATACTAATGATACGACCACTGAA
ATTACAGTTTTCATAATAAAGAAATG Coding sequence (CDS) from alignment at Sc0000003:7433361..7441486- >Blg00685.5 ID=Blg00685.5|Name=Blg00685.5|organism=Branchiostoma lanceolatum|type=CDS|length=609bp|location=Sequence derived from alignment at Sc0000003:7433361..7441486- (Branchiostoma lanceolatum)
ATGCCGGCAGATCTGACAAGGCCTACGGAGGTAGAAAGATTGTGTACGGA
GACGAAGAGACACTATACGGACGGGGTGGACATAGTAGTCAATAATGCAG
GATTTCAGCATACGTCACCTATCGAGTCGTTTCCCTTGGCAACGTGGGAC
GCCATGATGGCCGCCATGTTGACCGCACCATTCCTCATAATCAAGCACCT
CCTATCTGCCATGAAGGCAAAAGGATGGGGAAGGATAATCAATATTTCCT
CAGCGCACGGGCTTGTGGCGTCTGTGGAGAAATGTGCGTATGTGTCGGCG
AAACACGGCATCAATGGACTGACAAAGGTCGTTGCCTTGGAAACGGCAGG
GACCGGGGTCACGTGCAACGCCGTGTGTCCCGGATGGGTGCTGACACCAC
TCGTTGAAAAACAAATCCGACAGTTGATGGAAGATCACAACATAGCTTGG
AAAGACGCACAGACGATGCTTCTCTCAAGAAAACAGCCTTCCAATGGCTT
CGTGACTCCCGAACAGATTGGAGACATGGTAACCTTTCTTTGCTCCCAAG
CAGTCAATCAGATGACAGGATCCATCCTTTCCATCGACGGAGGATGGACA
GCGCAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00685.5-exon-Sc0000003-1570713199:7441198..7441486 | Blg00685.5-exon-Sc0000003-1570713199:7441198..7441486 | Branchiostoma lanceolatum | exon |
| Blg00685.5-exon-Sc0000003-1570713199:7436823..7436993 | Blg00685.5-exon-Sc0000003-1570713199:7436823..7436993 | Branchiostoma lanceolatum | exon |
| Blg00685.5-exon-Sc0000003-1570713199:7436192..7436319 | Blg00685.5-exon-Sc0000003-1570713199:7436192..7436319 | Branchiostoma lanceolatum | exon |
| Blg00685.5-exon-Sc0000003-1570713199:7435707..7435829 | Blg00685.5-exon-Sc0000003-1570713199:7435707..7435829 | Branchiostoma lanceolatum | exon |
| Blg00685.5-exon-Sc0000003-1570713199:7435375..7435478 | Blg00685.5-exon-Sc0000003-1570713199:7435375..7435478 | Branchiostoma lanceolatum | exon |
| Blg00685.5-exon-Sc0000003-1570713199:7434750..7434822 | Blg00685.5-exon-Sc0000003-1570713199:7434750..7434822 | Branchiostoma lanceolatum | exon |
| Blg00685.5-exon-Sc0000003-1570713199:7434520..7434581 | Blg00685.5-exon-Sc0000003-1570713199:7434520..7434581 | Branchiostoma lanceolatum | exon |
| Blg00685.5-exon-Sc0000003-1570713199:7434199..7434252 | Blg00685.5-exon-Sc0000003-1570713199:7434199..7434252 | Branchiostoma lanceolatum | exon |
| Blg00685.5-exon-Sc0000003-1570713199:7433361..7433984 | Blg00685.5-exon-Sc0000003-1570713199:7433361..7433984 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:7433361..7441486 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00685 |
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