Blg00689.0 (mRNA) - B. lanceolatum

Overview
NameBlg00689.0
Unique NameBlg00689.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:2978659..2981777-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00689.0 ID=Blg00689.0|Name=Blg00689.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3119bp|location=Sequence derived from alignment at Sc0000003:2978659..2981777- (Branchiostoma lanceolatum)
GCTAAGTGTGAGCGGTACTGGCCCGAGGATGAGGAGCCGGTGTTTTACGG AGACATTGTGGTGAAGATGCTGTCAGAGAACAAGGAGACTGACTGGACAT GCAGGGAGTTCGAGCTGGCTAATGTAAGTATCAACTTCATGGCATCTATC AGTAAAGGATTTTCCTGTCCTCTAATATATTCATCATTAAATTGAAAGAA AAAACATCCAACACAAACAAATGGTTGGCAAAGATAGACACACCTATATG CTAACTTTGATACATGCAACTGTACTGATAGATAAGATGTAAAACACACC TTGTAATATTTGCAATGTATATTCTTCTCAAAGTTTAAATCGCATGATGT CTAGTTATGCTACACTACCGGTATTGTGGCCTTTGTCTAATTTAGGGTTT ATGTTATGTAGTACTACGTGTTCCTTCATCTATAACATAACATGACAGGT GTCAGTAAAGCCCTGTCACACGGCAGGAAAATCAGTCGGCTGACAAGTCA GTGAGCTCTAAGTCACATTTTGTATTAGATGTACTCCCTGCCATGGCCAG TGGTCTATCCATTATCAAATTATTTTTAATTGAAAAATACACTTGAATCC TTGAATCTCTATCAAATCTTTTTGATTTGGCAACCTTCTAGTGATCAACA ATATACAGCTGAAGGTTGTTGACTGTGTGACAAGCTTAATGACATGACTT ATCTTTTCCATGTAAACTCCAGAACAGTCACAGCAGGTGTGTTCGTCAGT ACCAGTTCACCAGCTGGCCTGACCACGGTGTGCCGGAGGACACCGCCGCC AGCCTGCAGTTCGTCAGGATGGTCCGCAGGAACATCGGGGAGGGCGCCGG GCCGATTGTCATCCACTGCAGGTAAAACTAGACTAAGTATAACATGCAGC TCTCTGTTGATCTACATGTGTTATCTGTATGGCTCAATGTTCAATAAGCC ATGTACATATAGATAGTACATGTAGTAGTTACTGTTACAGTAGTAGATCA AAGGGATAATTATGAATGATAGTACATGTATGTCTTTTATGCCATATGCA ATTAAGTTACATGTACCATCTAAGAACTGATTTTCATAGCATCTAAGTGG TCTGTGAGAGAGGGATCATACATCATCATACTTCTGAGACAAGAGTCTGG CTTTGCCACAAGCCTGACTTGGATGTGATGGCTGACTTTCTTTATTTCCG AACATCAATGGGAAGGCTGCAAGCTCTCATGTGGCTGTGCAGCCTAGTCC TTGATCCTGTACACTGTGCTGCAGGTCGGGCATATGTAGCCATTTGTGGA TGGTGACTAAGGGCAGTTGCAGCAGTTTTCCGTCGACCTGAATGTAGTTC TTGTAATAATGCTCAGTTGCCTTCCCCAGTGCCGGTGTTGGCAGGACTGG TACCTTTAGCACTCTGGCTGCTAAAACTGTAGTCACTTAACAGTAGACTC TGTCTTAAAGTTTAACCTTTAGCATGCTGAAGTAGCTGTTTGGCAGAGTT AGGGAGCAGGGAGAAGGTTAATGTAAAACTTAGTGGTAGGCAAATTTGCA TAAGGCCTTTGGTCTCATATCTTTGTTTCTCCGCAGTGCCGGTGTGGGCA GGACCGGTACCTTCATCACTCTGGACCGGCTGCTGCAGCACATGGAGGAC CACGACCAGGTGGACATCTTCGGCATCGTTCATCAGATGAGGCTGTACAG GGTCTTCATGGTACAGACACAGGTCAGATACACAGATGATAATATTAACC CTTGCCAAACTGTTGTCTAATGTAGCATTAATGCTGCACTATGCGCTCCT TAGCAGAGCATATTGGGCATTAATGCTGGATTCCCTCTGCTCCCTTTGGA ACAGAGCATTAATGCCAGAATACACCCCTGTCCATTAATCATCATTTATC ACCCAGTCTTCTTGGTCTAATTGGTTCAAGCCTTGATCCAAGGCATGGCT GCTAGGACATTAAGGGACTGGTATTTGGACAGCCATAATTACCATGAAAT TACCATGGCATGCGCAGTGTGCACTAACAAGCATTAGTGCTGCATATGTA TTTCTGGCATTAATGCTACATTAGACAACAGTTTGGCAAGGCTTAAAGTC CTTTCAACAGAAAATCTTGCATTATATTTATTATATAACCTTTTCCTCGC TGACTAACTCTGTAACCAATGGAAATGGGGTGCCAAACGGCTTTTTCAGT GTGCCAATGGTTAAAAGTCATTACCTTCAGTACCTTTAAGTTTGTCTCCT CATGAAAGTGTTTCTTCTATCTACATTGTAACATGCCATATGCATAATTT TCATAAAGTATACATAAAACAAATCCTTCCAATACTGCTTTCAAATTGGC AATTTGGTCTGTTCAGCCTTTGACCCTTTCCTATGTAGATCCCATTCTCC AGTAATCTTTCCGTGGACCAGTGGTTTGGTAGGCAGCTCTTGGCAATGGT GTTTACTGTTTATATCGGCTTGTGCCAAATCCGCCTCTCCAAACGCAATG AAAAATAAATAAAAACAATGAAAATCCGTTATTCCCTTCTCGAGTTATCC ACAGGTAAAATTTGACAAAAACGCCCCTGCAATGCCTGAACTGACCGCTA GGGGACCTGAACTTATGCCACTTCTTTCGAAACACAAGAGCTTATAATCT ACCACCTAAAACCATAGCATATCCAGAACATGAGACATCAAAACCAGAAG TTCCACTTCAGTACCAAGGGAAGTCACTAGGGGGCCCAAAATCTAATTCT TTCCAGCTTTCGCCACACTCTACCAACACATTACAACGTAAATATGAAAC CAATCGGCAGCCGTTCTCGAGCTATCTTGTTGACCAACAGACACACAAAC AGCCAGCCAAACACTACTGAGAAGATAACCTCCATGATATTTCAAGGAGG TCACAACAAAATATCCCAATTCCATTTCAGGAGCAGTACATCTTCATCCA CCAGTGCATCATGGACCTGCTCCAGGAGAGCACGCCAGCGAAGCGCCGCT CCACGATAAAGAGGGTCCAGTTCGCAGAGGACGGGGATGAGGAGATTGAC TTGGACGATATCAACTTTGCTGAATCCACAGAGTACCTGGTCTCACCTGA TGCACACTCTGCTTTGTAA

Coding sequence (CDS) from alignment at Sc0000003:2978659..2981777-

>Blg00689.0 ID=Blg00689.0|Name=Blg00689.0|organism=Branchiostoma lanceolatum|type=CDS|length=597bp|location=Sequence derived from alignment at Sc0000003:2978659..2981777- (Branchiostoma lanceolatum)
GCTAAGTGTGAGCGGTACTGGCCCGAGGATGAGGAGCCGGTGTTTTACGG
AGACATTGTGGTGAAGATGCTGTCAGAGAACAAGGAGACTGACTGGACAT
GCAGGGAGTTCGAGCTGGCTAATAACAGTCACAGCAGGTGTGTTCGTCAG
TACCAGTTCACCAGCTGGCCTGACCACGGTGTGCCGGAGGACACCGCCGC
CAGCCTGCAGTTCGTCAGGATGGTCCGCAGGAACATCGGGGAGGGCGCCG
GGCCGATTGTCATCCACTGCAGTGCCGGTGTGGGCAGGACCGGTACCTTC
ATCACTCTGGACCGGCTGCTGCAGCACATGGAGGACCACGACCAGGTGGA
CATCTTCGGCATCGTTCATCAGATGAGGCTGTACAGGGTCTTCATGGTAC
AGACACAGGAGCAGTACATCTTCATCCACCAGTGCATCATGGACCTGCTC
CAGGAGAGCACGCCAGCGAAGCGCCGCTCCACGATAAAGAGGGTCCAGTT
CGCAGAGGACGGGGATGAGGAGATTGACTTGGACGATATCAACTTTGCTG
AATCCACAGAGTACCTGGTCTCACCTGATGCACACTCTGCTTTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00689.0Blg00689.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00689.0-exon-Sc0000003-1570713199:2981655..2981777Blg00689.0-exon-Sc0000003-1570713199:2981655..2981777Branchiostoma lanceolatumexon
Blg00689.0-exon-Sc0000003-1570713199:2980907..2981055Blg00689.0-exon-Sc0000003-1570713199:2980907..2981055Branchiostoma lanceolatumexon
Blg00689.0-exon-Sc0000003-1570713199:2980056..2980191Blg00689.0-exon-Sc0000003-1570713199:2980056..2980191Branchiostoma lanceolatumexon
Blg00689.0-exon-Sc0000003-1570713199:2978659..2978847Blg00689.0-exon-Sc0000003-1570713199:2978659..2978847Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:2978659..2981777 -
Properties
Property NameValue
GeneIDBlg00689