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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:6834741..6843176+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00692.2 ID=Blg00692.2|Name=Blg00692.2|organism=Branchiostoma lanceolatum|type=mRNA|length=8436bp|location=Sequence derived from alignment at Sc0000003:6834741..6843176+ (Branchiostoma lanceolatum)
ACATGCTGTATTTGCTCAGGGGCAAATGACGGCCTTTCTAGTTAAAGATC
AGTTCCTCTGACTCACTTACAATTACTGCATGAAGCTGAAATTGTATAAT
GATAAAGGTCTCTAGATCTGTAGGCTACATGCCAGTTTTTATTCATGTAT
ATAATAAATGTATGTGATATTTTATGTATATACACTTATCTACATATGTG
TGCTGCCTTTGTTATAGTTCTCTTCCAACCATACGAACTGAATTCGGTCT
TCACCTACGTCGACGGGGGGCTATCATCCAATTTTCCACTGTATACATTT
GACGGTAGGTGTTTTAAAGATGAATTCTACTACATTGTATCTAATGGCGA
AGTATGAATTACACATTTACGACTAATACCGCAGAATGCGTTACGTGTTT
ATCGTCCTTTTAAACATTTGGCAATGACAACGTCATTGTTTGAATGCTAT
TTTACATGGTTTTAACTTAACATTCATTATTCAATCTATACTTGGGGTAT
TTTTTTCATTCTTGAATGGGAGAAATGTGTGATTCAATTTTCGACTGAGA
TGATTATACAAAATGTTAATTTATTGAATGGAGATGTTTTGGAATGGCCC
ATTATGTGAATTTCCTGTGGAATAATTCTTTCTTGCAAAGGGGGTCAAAT
TGGGAGAGCTCCATTTCGGACTAGAATGACTTTGTACTTTTGGGTAGAAG
TTGGAATGTTCAATTTTTGCACAGGGATAATTTTGCAAGCGTTCATTTTT
CATGAAGAGGGAGATTGGGTGAAATATGCTGTATTTGCTTGCAAATGTTA
CCTTTCTATTTCTCCCTTAATTTTTTTCTGATTTGATTTGGTGTCTAGGT
TGGTACCTCTCAATGGACCAGACTTCGACTTTCCACCGTTGCCTGCCAAT
CATGGGTGAGACAGACCCAGTCATGGTCAGTCAGCTGTTCTACCCGGAGT
ACCGGAAGCAGCGTTTCAGACCCCCAGAACCTGGATCTGACGGCTTCTTT
AAAACACTGGGAGTCCTAAACGTAAGCTGTTTCTTTAACCACCCCCACAC
ACCCCAATCAGTAAACACCGGGGGTACATTGGTATCGAACTAATCGAAGC
GCTATGTTTTTACCTTCGCCAAGAGGGTTATATTTGAAATTTGGCCTCAG
AAGTCCTAGACCTTTTTCGAACCCGACTTTGACTTAATTTTGGATTTTTT
AACTTTGACTTAATGGCATCGTATAGGAAATTAAAATTATACATTTTGGC
TAAAATGGCAAAAACTACATACATATGTATACTGATTTTGAATATGTCAA
GGTACATGTTCCCTATCTAGCCTACTACCAAATTTCAGGTAATGTAACTT
AACATAGCTCCATGACCAAAATTGGGCATTTTTGATATCAAAACTTTAAT
AAATCATTCTAAAGACAATCATCAACAAAATTGAGATGAAGGTCAAAACT
CGATCTATCCTCCTGCTGAATTTCAGGTGATTTGACAGGACATTGTGGCC
CAAAATGCACATTTTCAGTTGAAAAATAGCACAAAAAAGAACTACCAAAT
GGAAGTAAAGATCAAAGCCCATGTTACCAACCTGTTCTTACGCCGAATTT
CAGGTCATTTGCCTGGAATCCAGGTACTGATCAACAGGTACATGAAATAG
TTTTGGGGTACATCTGTGTGTAACCCAAGTGTACATACAAATTAATCAGT
CGGGTGAGGGTTAATCTTAAAAACATCGCACCTAACATAAATTTAACCCA
ACNAAAAACATCGCACGTAACATAAATTTAACCCAACAGTAGCATGCCTA
ATAAACATAATGGGTCAACTTATTGTTGATGTTAATTGAGCATTTTTCCA
TATTGATGAGCAACATATGTCAAGAAATGTTTGGTCATCCTGACGAACTT
AAATAAGTTTTTTTTCAACCAGTATTCCAGGATTAACCGTGAGCCGCACC
AGCATCTGTTTGAGAAGCGACTGCAGAAGTTGCAGGAGGTCAATCCTGAC
TTTCAGAATCAAAGACCCCCCACCAAGAAGGAAAGGTAACGTTACTTCAC
CTAAATCCGCAGGGTAACATATATCCGTTTTTTAATAGAAAAAACGGGGT
ATTAGGGATAACGTTAACGTTATACGAGGGTGGTACAAAAACAAACGCAA
TTTTTGTGTGGTTAACTTGAAGTCAACTCAGACGCTGATAAATATGTGAA
AAATACAGTGACATTTTTCAGTCTCAGTTCTCTTCCTTTACATTTGTGCC
AAATGTCAACTCATTTCATATAAAAATGAACCTGCTATGATAAAAATTGC
GTTTGCTTTTGTACCACCCTCGTATGATAGATACAACATCAGCAATACCG
CCAGAAATGCAAACTTGTTTGAAAACCTGCATTCGAATACCACCCTAGAA
TCGGAACAGACTGGCCTCCTTATGGGAGGAGTTGAACTACGGTGTTCGTT
CGCTGAAACAAAGCGTTGTTGATGTTTTTTTGCGGCGTAGCTGTGTGGAA
CTTAATGGCCGTTTTATCGTGATGTTTCTATGCTTGATATTCTATACCTG
TAGCATTCTCTTTAACGTATACGTAAGGAAGGAACAACAGCTGCTTTATA
AATGAATTAAGTAGCAAGGGAATTTTGAGAGGAGTCTTCATCATTGTGAA
TTCCTCGCTGATTCTGTATATGAATTTTTAAAACTTTCTGTCAGAGTCAC
CGACGTGCCTAGCATGCCATAGGTGTAAAAACACAGGCAGACGTTGCAAC
TCTTTCACATACTTTATATCTATGTCAGTATAATAGAACCATGTCTATTT
CACACAGAACATGCCCTACTCTCGCATATGCTTCGGTCCCAATGGGAAAA
AGTGGCCCCGTGAGACACCTGCGGCTGCCGGGATATTTTAGGCCCCGGCC
GGGACCCCGAATCATTTTAACCCGGCCTTAAAATGAACAAACACCGCAAA
CGCACCGAAAACAATACCTACGTTTTCACGGAGGGAAAAATATTGCAATC
ACTGTGACAGCGAGTGCATGAGCGCTGAATCAGGAAATAGCACACTGAGA
TGTTTGATTTTTTTAATTTCTGCTTGTACAGAAAATACTTTGAAGGGTTC
CGGGAAAAGAAAGAATTGACCAAACGGGGAAAGGACTCCATCCAGAGCCA
AATGCAGACGATTGGGAAAATCATACAGCTCATCTTTGGAGGGATCGCTG
ACCAGACAGGAAGAGTAAGTTATATTATCATATAGCCAGATGACGTCAGC
CAATCAGAAGGCTCCATTTTCCCCACAACCTGGGTCATTAATATCCCATC
TACTACCCATTGGCCCAGTTTTTGTAACGTTTCCATTACATGGGAGAGTG
CTGTTTTTCTTATTCGCTTTTAAGATATAAATGAACTTTTCGATAGAGAC
AGATTTGTATAAGCACAGTCACACATGAATATAACGTTAGTAATGATAAA
AAGTAGATGCATTGATTAGAAATCAATGTAGGTAAATTCTGTAAACAATA
ACATCACTTATCAAAGGCAAACACACAAATGTGAGTCTTACGATTTCTTT
ACAGGTACGCACAACTCGAGTGCAAGGAGCCGGCGCTAACATAACCGTGG
AGGAAGCCAGGAATCGTTTCAATGAGGTAAGTATAGATTCATGTGCTGTC
AAATAAATAATAAAATTCTGTGGCGATAAATTTCATTTTATTTGCCGATT
GTATACAACGAAGGCCCACGTAATTTTTCACCCAAAGAGATGGCACCNTA
CAACGTAATTTTTCACCAAAAGAGATGGCACTATCAAAGCTTTGTCTACC
AGCAAAACTTGCCCCTCAAAATGCTGGAGATAGCGTTTCAGAGGGTCAAG
ATTTTAAATTTTCCGGACCCCGGACCCCCCCCCCCTAGAATTGTCGCGCT
CGTAGGTCGGGAGCAGTCTGACCTGTTTTAGATCTAGAGTCAAATTTGGC
TCATAAACGCACCCTGATTACTACTGACTTACTCCCAACCACCAGCTAAC
CACCAGTGAACAACCAGCCCCAAAAGAAAACTATTCCAGACCCCCGTCAA
CATCCAAATGCTATCTACTGGCTATCTACTAATTCCCATATCTTATACTC
CTCAGGCGGTGAATGATAGCGATCTCCAGCGGTTTGGGTTGCGTACGAAA
GAAGAAGCTTTCAGGAGGTTGCTTCTGACTGAAAGNGCTTCTGACCGAAA
GAGGAGAGGTAAGACATCTGCATGGTTTGATACATCTATCTCTTCAGCTT
CCCTGCGATGTGAGATCATGTCCTGCATCAGCTATATACTGTAGTAACAT
CTCTTCAAATCAGTACCTGGTATGCTATATTTTTCGTACCGGTGCAATGG
CCAAATGGATAGAGTGTTGCATACGGTAGGTCGTGAGTTCGATCCACGGC
CGAGTCATACCAAAGACTTAAAAATGGTACGTACTGCTTTCTCTGCTTAG
CACGTGCACTCTCTACATTTTGGAAATAGTATGGAAGTTAAACACACGCC
ACTACCACTACCCTGCTATAGTGATTGCACCTATGCACCCTCTGGTGTGG
GAGGAATTTAACTTTATTTAAACTTTATCTGTTTTCTATCTAGCTGACGG
ACACAAAGATTCTGAACATCTACCATAACTATCTGCCTCTCCAAAATGCC
AAGATGGAAATTCTCGGCGAAAGACCGGTGTCATCTACCAAACAGTACTA
CGGAACCTTGATGGATTACTTTGGGAGCAAGAACCAACTCTCGGTAAGCT
TCATTCGCCATACGAAGGACCTACGACAGCAATTGAGGGCATTCTAAGAC
CCCGTTCATACTAGGCTTCGCCTATCCAGATAAAACCGGATACGCGGTAG
ATCCGGATCCGCGAAGCCTAGTATGAACGGTCCTTATCCGGATATGAATC
TGGATATATCCAGATACGATGTATCCACATCTGGAGGTGGATTTATCCGG
ATCAGCTGCGGGGTGAACCCTGGTATGAACCGGATCTACCGCGTATCCGG
ATATATCCGGATACGCGAAGCGTAGTATGAACGGGGTGTAAATATAGTCG
TGAAGTAGTTGCACATGTTCAAATTAGCCCACCCTAGGGGCCACTAGGCT
TACCGTATGTTGATATTTACACCGGACGGTCTAGTTTGAGATGGTTTTAG
AAACTCAGCGGACCTAGATTTTGTTCGATCAGTTCACAAACACCGAAAAT
GCGAAATAATGATGCAAATATGGTAAAAGTGAATGTATCTGTCTTTCACA
TGGAGGTTTTGTTCTCGAGAATATTTTCAATTTTAGTGCCAAAATCTTAC
ATAGAGTACCTTTCAATCCTTCTCGACGAGACGGTGTAGTCAGTCAGCCG
CACTGAAAAGATATCGAACGGCGAATGTTAATCTCCAAGCAGACCCAACG
GTTGCAAAGACCGTATCCAACTGGCAGAAGGTGTTTTTATTGCAACCGAC
GGTGCCTGATAACTTCTCTGGCTGACTGGAGCTTCTCTGGCTAGCTTGTA
CGATTTTGGCACTGTCCGATCTGCTTGGAGACTAGGCGAATGTAACGTTG
CTGCGTGCAAAGGAAGTGTTCTAAGGAAACGCTTGATGGTAAAGTGATCC
ATGAAAGTCCCTAGAAATAGCAATACAATGTACATCAGCCAGAATAAAAT
AAGAATCATCTGTGTGTTCTCATAAGTTTTGTAACCCTAGTTTTATGTGA
CAAAATAAACAGGTTGAGTCAATGTTGTATACTATAGGTGTGACTGATAG
TTCAGTGTAATAATACATGTAAAATAGTAATATAACCAGCTGCTGTCGCG
CTGCGTGCCTGCGATGCTGTTGTGTTACGCCGAAGAGCGGTTATAATACC
GGCTAAACAGATACAGATACTCTTTGGTTGATTGAATTGAATTTCCGTTC
AGTACCTTAATTTGTCTCCTGGACCATAACGACACTTGCAAGATGTATCA
ACAGAACACTGTGAACATTGTGAAATGTTAGCCTCCATAGCAGGCTCTAA
CCTGCCTTTTTGGGGGGCTTAATACTACACTTCTTGCAGCCCATCCGTAA
CCATCAGCCACCCTGTAACTAACCGGCCTTTTTGGGGGGTAAATAATACA
CTTTTTGCAGCCAGCCCGTAACCATCAACCACCCTGTAACTATCTTCTAT
GTGACGGGGTGGCTGATGGTTACGGGCTGCAAAAATTGTATTATTTAGCC
CCCCGAAAAGGCCGGTTAGAGCCTGCTATGGAGGCTAGTGAAATGTGTTG
TCCACGTTTAACATTTTGTTCTATAGCGAGAAGACGTGGGGCGATGTATC
GCTGTGGACGCGGACTATCTCTCCACAATGGACTTCGACATGGAACCTGC
AGACATGGAGTTCCTCATGAAGGTATTCATTAAACTACATATTGAAACGG
GAAGACATACCCGCACTCCTCTAGAACAACGATTATGTAAACATTGTACT
TTGAATAGAGTAGAAGACGAATGTCATTTTGTGGTAGAATGTGTATTATA
TACCAAAGAAAGAAATGAACTGTATAAACTTGTAGAAAACCTATTTCCCT
ACTTCACACATTTAAGTACTGTTCAAAAATTCATATTTCTAATGCGACTA
GACAAACCTCCCATTGAAAAACACGTCTGTTCTTTTATATCTACTATAAC
CGAAAAGCGAGGAGAAGTAGAATTTATTTAATGATAGTCATATTCTTTTG
TATCCGCTAACTGTACTGTCTTGTATTATATTTTGTTGTGACCTGTACTT
AGCCAAGTGTGGCAGAAATGTGCAATAAAGGTCTTCATTCATTGTCCCTC
TGAATAATACGGAGGAGATACGATTTCTTTTATCTCTGACAGGATGTTTT
CGTTGAACTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTGTTTATGTCT
CTCATGATACTTACTATGTGAGACAGACTTGGAGCAGGGAACAAACAATT
AAACCCCTACCCTTGGATTCATTGCCAAACTACCATTATCTCTATCATTC
TTTCTTTCTTTCAGAACACGACATTGTTATTGTTATTCACATCTTGCTGT
TACTAGTGCACGTTGATATCTCCTGTATACCACAGTGAATCGATATGTAA
TTAATCAATAATGCTAGGGTTTTATAGAGTTATCCATCACATATTTACCA
TTATTTGGGTAAAAACGTTTATTCATTTCTGTAAGGTGATAGCCTGCTTG
CCCGCTCTTTACAGCAAGGTGTCGCTGCTGCAACGTCCTTCCTTTGTGAG
TACGTCGACAGGGAGGTCCATGCTGCAGCAGCCGGACGGCCGAGCATAAC
TCTAGCTGAAGAACAGTAAGTTCTGTGTAGCCGTAAATTCGATGCTTCGA
GCTGTTGTCAAGTAAGTAGATACGTGGTGTTTTAGGGAATTGCTGTTGTT
TTTATGATCAAAATAGTCACTTTAAACTGATTCCCTCTCCGTTAGTTCCT
GGTATTTGTTGGTCTTTGAATAACTCTAAGAACAGATTTCAACAACAGAA
AGATGGAGAAAGATGATTCAACGTGCTTTGAAAGATGGCAAAAGCAAGTG
ACTTGAAAAAGAAGCAGTTTAGAATTGTGAGATACCACACTCTTCTGCGA
TATATGTGTTGAGATGTGAAGAATTCCTATCCAGGATATAGTATCTGACT
TAACTTATTCGTTTCTTTATTGCAATTAATATATGGGGGATAAGTTAATT
ACTTGCATGGTATAAGGGGTCAATCGCTAGACGAATTTTGAGTTGAAGAC
AATTCGTGGCATTATCTGTTGTTTGAATCTTTCTTTACAATATCGATATC
TTTATGTAGATTGTATCCAGCCATACCCTGAGGCCTGCGGCCAAGAATCA
TGTCCACGCACGTACATCTGGGCACAGTGCCGCTTCTTCAAGAATCAGCT
AGACCTTTATGAAGCGAAAATCAGTGGTCTACACATCGTATATTAGGCAT
TTACATGTATATTTGTAGCCATATTTCATCACAAAAGTATGTTTGGTTTA
TAAATTGTGAAAACCTTCTGGTCCCTATGTTACCGTTAAAACTTAGCTTG
CTGGATCGAAGCCCTGAGATTGAATCCCGGCCTGCTCAACCGACATGCAC
GCTGTTGGAAAGGGTCGCAGTCCTTAGTACGGGACGTTAAGCCGCGGTCT
ACTGTATACTAGTAGAAAATGCTTGTCGAAAAGAGCTAGGGGAATTTCCC
CGTTATTCTAAACCTGTAAATACTGTATATGATGATGATGAAATACAGTA
TATAGCATTCGTCTTCTCACGACCAGTGGAAAAGCAGCTCTTAAGTGAGC
TAAACTTTTCGAGATCACTTTTGTACCCATGTGACAAAATGAGCTAGTAT
GCCCGTCTGTCAGTCCTGATTTGCAGGATTGTCTGGAAGACACCATCTTG
GTCTTGTATGTTATGATTACAATCACTGTGATATAC Coding sequence (CDS) from alignment at Sc0000003:6834741..6843176+ >Blg00692.2 ID=Blg00692.2|Name=Blg00692.2|organism=Branchiostoma lanceolatum|type=CDS|length=1101bp|location=Sequence derived from alignment at Sc0000003:6834741..6843176+ (Branchiostoma lanceolatum)
ATGTATATAATAAATGTATGTGATATTTTATGTATATACACTTATCTACA
TATGTGTGCTGCCTTTGTTATAGTTCTCTTCCAACCATACGAACTGAATT
CGGTCTTCACCTACGTCGACGGGGGGCTATCATCCAATTTTCCACTGTAT
ACATTTGACGGTTGGTACCTCTCAATGGACCAGACTTCGACTTTCCACCG
TTGCCTGCCAATCATGGGTGAGACAGACCCAGTCATGGTCAGTCAGCTGT
TCTACCCGGAGTACCGGAAGCAGCGTTTCAGACCCCCAGAACCTGGATCT
GACGGCTTCTTTAAAACACTGGGAGTCCTAAACTATTCCAGGATTAACCG
TGAGCCGCACCAGCATCTGTTTGAGAAGCGACTGCAGAAGTTGCAGGAGG
TCAATCCTGACTTTCAGAATCAAAGACCCCCCACCAAGAAGGAAAGAAAA
TACTTTGAAGGGTTCCGGGAAAAGAAAGAATTGACCAAACGGGGAAAGGA
CTCCATCCAGAGCCAAATGCAGACGATTGGGAAAATCATACAGCTCATCT
TTGGAGGGATCGCTGACCAGACAGGAAGAGTACGCACAACTCGAGTGCAA
GGAGCCGGCGCTAACATAACCGTGGAGGAAGCCAGGAATCGTTTCAATGA
GGCGGTGAATGATAGCGATCTCCAGCGGTTTGGGTTGCGTACGAAAGAAG
AAGCTTTCAGGAGGTTGCTTCTGACTGAAAGNCTGACGGACACAAAGATT
CTGAACATCTACCATAACTATCTGCCTCTCCAAAATGCCAAGATGGAAAT
TCTCGGCGAAAGACCGGTGTCATCTACCAAACAGTACTACGGAACCTTGA
TGGATTACTTTGGGAGCAAGAACCAACTCTCGCGAGAAGACGTGGGGCGA
TGTATCGCTGTGGACGCGGACTATCTCTCCACAATGGACTTCGACATGGA
ACCTGCAGACATGGAGTTCCTCATGAAGCAAGGTGTCGCTGCTGCAACGT
CCTTCCTTTGTGAGTACGTCGACAGGGAGGTCCATGCTGCAGCAGCCGGA
CGGCCGAGCATAACTCTAGCTGAAGAACAATTGTATCCAGCCATACCCTG
A
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00692.2-exon-Sc0000003-1570713199:6834741..6835044 | Blg00692.2-exon-Sc0000003-1570713199:6834741..6835044 | Branchiostoma lanceolatum | exon |
| Blg00692.2-exon-Sc0000003-1570713199:6835589..6835761 | Blg00692.2-exon-Sc0000003-1570713199:6835589..6835761 | Branchiostoma lanceolatum | exon |
| Blg00692.2-exon-Sc0000003-1570713199:6836663..6836775 | Blg00692.2-exon-Sc0000003-1570713199:6836663..6836775 | Branchiostoma lanceolatum | exon |
| Blg00692.2-exon-Sc0000003-1570713199:6837822..6837954 | Blg00692.2-exon-Sc0000003-1570713199:6837822..6837954 | Branchiostoma lanceolatum | exon |
| Blg00692.2-exon-Sc0000003-1570713199:6838295..6838366 | Blg00692.2-exon-Sc0000003-1570713199:6838295..6838366 | Branchiostoma lanceolatum | exon |
| Blg00692.2-exon-Sc0000003-1570713199:6838846..6838926 | Blg00692.2-exon-Sc0000003-1570713199:6838846..6838926 | Branchiostoma lanceolatum | exon |
| Blg00692.2-exon-Sc0000003-1570713199:6839334..6839483 | Blg00692.2-exon-Sc0000003-1570713199:6839334..6839483 | Branchiostoma lanceolatum | exon |
| Blg00692.2-exon-Sc0000003-1570713199:6841017..6841112 | Blg00692.2-exon-Sc0000003-1570713199:6841017..6841112 | Branchiostoma lanceolatum | exon |
| Blg00692.2-exon-Sc0000003-1570713199:6841955..6842055 | Blg00692.2-exon-Sc0000003-1570713199:6841955..6842055 | Branchiostoma lanceolatum | exon |
| Blg00692.2-exon-Sc0000003-1570713199:6842550..6843176 | Blg00692.2-exon-Sc0000003-1570713199:6842550..6843176 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:6834741..6843176 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00692 |
|
