Blg00712.0 (mRNA) - B. lanceolatum

Overview
NameBlg00712.0
Unique NameBlg00712.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:3802053..3804500-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00712.0 ID=Blg00712.0|Name=Blg00712.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2448bp|location=Sequence derived from alignment at Sc0000003:3802053..3804500- (Branchiostoma lanceolatum)
AAAACCTCACAGTGGCAAGAAGCGACAACTTTCACAATGGTGGCTGAGAA GACCTTCAAACCCTACGTGTTCTCAACGGTAGCTTTTGTAGCTATCTTAT GCGCTCTTGTGCCGTATACCCTTGTGAGGTAGGAGTACATCATTTTTGTA CACACAGAAGACTGTTTCGTTTAGTGGTTTGAATAGCACTAGTTTTGTTT TGTAAACAAGCCCGGTACCATGGAAATTTGTTTGTCTTCAATATTTGATT TTTATATGAATTTGATCTTGTTTATTAATCATTTGTTGTTGTTTCCAGGG TACAATTTGTGGTAAAAGAGGAGATTTTCATAGCCGCTCCGCCCGAAGAA GTGTTCGCCTTTCTAAGCGACGTTCGGTTACTCGACCACGTGCACCCTTA CAGGTGACTTTATATATGTATATTTATACACATATATTTACTAATATATA CCAATATATACAAATATCATATAGACCAATTTTATTATCATTATATATTT ATTCGGTATTGCTGAATGCAAGGCAAAAATTGGCCATTACTAGGCACTGA ACTAAGTTGAAGAGGTAAGGAGATATTTTTCTACCCTCGCCAAGAAGGTT ATGTGTTCGGTGCTGTTTTTTTCTGGCGGGAGTTTTGGATAGCAAAACTC CAAAAGCTGTGGATGGATTTGTACGAAAAAAAAATGGGTCATGTTTGTAA GAAATGGATTAAAAAGTTGTTTGGCAAGACTGCTTGAAAGCAAAGTGTAC CAAGCACAATATAACCGAACGAATCTCAACGTCTGGTTAACCGGTTGTGT TACAAGAACTTATTAACTTCCAAAGAACTTACAACCAGCATTAAGAAGCT ACTCACAATTTTTTTAATATGATGAAAACCCTCTTATAGCCTCTAACCCT CTCATATTAATTCCCAGTAAATGTTACAATTTGTCGAAAATGTATGCAGA TAGCGGCACACATCCGGCTCTAAAAGTCTGCTTTGTGTCCTGTTTTGCTA CAGAATCGAAGCCCGTGACATCCAACATTTCAGCGAGCTTGAGTTGAACT ACACCAGTGTGGAGAGGGTAGACTATGTGAAGGGGGTCTACTCCACCGTA TACGCCTTCCCTGTGTGGGTGCGCTTTGCAAAGTAAGTGTTGTTGTTACT TCATCCCTAAGAGAGTAAAGTATTATAGCTTTGGCCTCTCTCTTTCTGCC TGTCTGTCTGTCTGTCTGCCTGTCTTTCTCCCTGTCTCTCTCTCTGTGTC TCTGTCTGTCTCTTTCTCTGTATGTCTGTCTGTCTGTCTGTCTCTGTCTC TGTCTCTGTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCAGTCTCTGTGTCTGTCTGCGTGTCTCTCTGTG TTTCCTCATTCCAGTTTCTCCAATTTCTGTCTGTTCTCGGGCACCGCTGC CGTGCAGGAGTTGAAGTCTGCTATCTCTGATTGCCTTCTTCACTTATCAT TTTTATATTGTTGTCGTCTCGATTGTAGACTTTGATTGTAGATTTTCGAT TGAAGATTCTAAATGAATGCCCTTGATACTCAGTCATGCTTGGGAGAAAA ACGATTTAGTTTTTCACCAAAAAAATCCCATTTTTCTTTAACTTAGCCAA AGCACTGGCGCTATTCGCGGACACACAAAGTATTGCAACAATTTCCGATC GTGGAATAACTAATTTATCTTTTTGTTTTTATTTCTTACCTAGAATAAAC AACGGGTACCAAGTCCGCTCTACCTATGACGTCCTCAACGGTACGCTCAT TGCGCGCCAGGCTTTCACCGTCACAGCCGCAAAGCATGCCGGTCTCAACG GAACCATGCTGACGGACAAGAACCTAATGGAATGTCCCTGGATCTATTCT TACGCAACATTTTGGAAAGCTAAGGAGGCGCACAGGGACATCCTTGAAGG GATGAAGCAACTGCTAGAGAGAGAACAGGTGTACGAACTTAATTTACCGA ACAGGTATCTCACCGGAAGTGACGTCACGAGTCGACACATTCCTTGTGTT ACGAATCAGTAAGACAAATGTATATATATAATGAGCGGTTATGAAATAAG AAGATGGGTAAAGAGATTTTAGTTCATTTTTAACAAATGTGTTCATGCAC ATGCATCAGATAGTATCTAGTAGTGGTTTAACTTATCAAATGTTAAACTT TTCAATTGTAGAAACGTTGCAACATTGGCCAGTCAATTTCTTTCTCAGAT TTGCTTTCCATAAGTTATTTTGCTATAGTTCTTATCATTATGTGCAATGA AATGAATATTCAATATTGTTTCACTTAGCCTATTAAATGTACGATGTATT GGATATGAATGAGGTGACGGTTATAGGGATGATATCTTAAGTCTTTCATA GATGATCTAGATGCTGAACTTTGCCAATAAATCCATGTAATCACTGGG

Coding sequence (CDS) from alignment at Sc0000003:3802053..3804500-

>Blg00712.0 ID=Blg00712.0|Name=Blg00712.0|organism=Branchiostoma lanceolatum|type=CDS|length=645bp|location=Sequence derived from alignment at Sc0000003:3802053..3804500- (Branchiostoma lanceolatum)
ATGGTGGCTGAGAAGACCTTCAAACCCTACGTGTTCTCAACGGTAGCTTT
TGTAGCTATCTTATGCGCTCTTGTGCCGTATACCCTTGTGAGGGTACAAT
TTGTGGTAAAAGAGGAGATTTTCATAGCCGCTCCGCCCGAAGAAGTGTTC
GCCTTTCTAAGCGACGTTCGGTTACTCGACCACGTGCACCCTTACAGAAT
CGAAGCCCGTGACATCCAACATTTCAGCGAGCTTGAGTTGAACTACACCA
GTGTGGAGAGGGTAGACTATGTGAAGGGGGTCTACTCCACCGTATACGCC
TTCCCTGTGTGGGTGCGCTTTGCAAAAATAAACAACGGGTACCAAGTCCG
CTCTACCTATGACGTCCTCAACGGTACGCTCATTGCGCGCCAGGCTTTCA
CCGTCACAGCCGCAAAGCATGCCGGTCTCAACGGAACCATGCTGACGGAC
AAGAACCTAATGGAATGTCCCTGGATCTATTCTTACGCAACATTTTGGAA
AGCTAAGGAGGCGCACAGGGACATCCTTGAAGGGATGAAGCAACTGCTAG
AGAGAGAACAGGTGTACGAACTTAATTTACCGAACAGGTATCTCACCGGA
AGTGACGTCACGAGTCGACACATTCCTTGTGTTACGAATCAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00712.0Blg00712.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00712.0-exon-Sc0000003-1570713199:3804373..3804500Blg00712.0-exon-Sc0000003-1570713199:3804373..3804500Branchiostoma lanceolatumexon
Blg00712.0-exon-Sc0000003-1570713199:3804098..3804202Blg00712.0-exon-Sc0000003-1570713199:3804098..3804202Branchiostoma lanceolatumexon
Blg00712.0-exon-Sc0000003-1570713199:3803369..3803497Blg00712.0-exon-Sc0000003-1570713199:3803369..3803497Branchiostoma lanceolatumexon
Blg00712.0-exon-Sc0000003-1570713199:3802053..3802757Blg00712.0-exon-Sc0000003-1570713199:3802053..3802757Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:3802053..3804500 -
Properties
Property NameValue
GeneIDBlg00712