Blg00740.0 (mRNA) - B. lanceolatum

Overview
NameBlg00740.0
Unique NameBlg00740.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Full-screen view
Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:6011830..6013738+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00740.0 ID=Blg00740.0|Name=Blg00740.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1909bp|location=Sequence derived from alignment at Sc0000003:6011830..6013738+ (Branchiostoma lanceolatum)
ATGGCTGAAGGAGGCATGATGAAGGAAGACATCCTGCAGGAGAAGATGGA
CATTGTGAGTGAGATGATCACCATGCTGGCTGCCGGGGAGCAGGCAGAGG
AGCTGGAGCGTGTCACCGAGGTGTGGGCAAAAATCAACCAGCTAAGAGAG
ACACAGGAGGAGGATGTCAAGAAAACCATACAAGGTACAAAGTATTATTG
TTTCTTTCACTGTAACTTCATGTTCACTGTTTTCATGGTCACCTCTGTGC
TGTGAACTTATCATCACCGGGAAAAAAACCCTGTTGTTATTATTCATAAA
TCATTCACACATCTGTTCTGTAAATCACTTGCCGCCACCGTGATGTTAGA
TTATAGTGAAAATGTCCATTTTCCCTACGCTGTGTCAGTTTGCGAACAGT
GAAGATTAAGTGAAGATACACAATAACTTTGTCATACATTTGTACGGTTT
TGCTGACATTCTACTTTATGTAATGTTGTCCACCTAAAATAATTTCTGTG
TACTCAACAACATTATTTCTTCTGTCTTGTGAAGCATTATTGGCTATGAA
TGAGGATGAAGAGCAGAAAGTGAAGAGCATCAGCCAATCAGAGGAAGCGT
ACCAACAGAAGGAAGCTGAGCTGGAGGCTGAGAAATCCCAGGCTGAGAAG
CAGAGACAACAGGCTGAACAGGGCGTTCAATATCCTTTTATGGGCATTCG
TCAGGTCAGAGGTCAACCCGTAGGTATAATTTTCAAATGATCTCCAAGCA
GATGTTGGGGTGAAGGATTGAAACATTTTCTGACTGCCCAGGTTTCTCTG
ACAGACAGCCCCCACCCCCCGTAATTACATCAGCACATGGGAAAAGTAAG
ATATAACCGACATACTGATAGTTTTGATATCCTCATCAGAGCAATGTGAA
AACAAAGACTGAGACTTCTTGCTACCTTTATCAGTTGATCGCAAAATTCC
CCTACTAGTAATAGTCCTAGAATTTATCATGATGTAGGATCTGGAATACT
GTACATCATTTATATGTGTCATGTTCAGTACCTTAACTCATTCCCACATC
CCTCATGGGAAAGCTTGAAAAACTGAAGGACGAACAAGAGGCAGTAAGCA
AGCAGAAGGAGACTGTCAAACAGAACACAACAGAGGCCCTCCCTGATGTG
AGGTGAGGTGTACGTTATGACATGTGGAAGGGCCACCGTGATAGTGGTGT
TTTACTGAGAAATATACAATATATAGTCCTAAGTCACTGAATGTAATCCT
TCAAAACCATATTGCTGGCTCACTTGAGGCTTTGCAACGATAGTGGTGAA
GAGGTTAAAATGTTAGCTAATTTACTGCATTTTAAATTTTACACACACAG
TGACACAAACACACAATTTTTTAAGATCCATCTTACACATGTACATTGTC
CTGCTGTGGGTACAATATATTTATGCCATATTGATTATAATATTGTTTAA
AACCATGACATACAAGGAAAATATGTTTTCACACATATGCTTTAGGAATT
AGCATTTACCTTCTTGGTTTGATTTTCACAGGTATCTCACTACCCTGTAC
TCCAATGTGACCAAGCTGAAATGGGACTTCAGCAGTGGACCTGACGATAT
CAAGGGATGTATCCTTTTTCATGGAAAACATGGTAAACATCTGTGTACAG
AGTTAATCTTGTTTCCTTCATCATGTCTCCTATAATTACCAGTCTTTAGT
TAGTTTATGAACAAGGTTGCTTAAAAATGTTTTTATGAATTTTTAGAACT
TCATGTCAACTGTACCGTGGCCAGTATGACCCTTAACCTTTGCCCTCAGT
TGTGACCTGCAAGTCGGATGTGAAGCCCTTCTCGCTGAACTCCAAGCAGA
ACTCCCAGTTCTTTGTGGCAAACTACCTCTGGGACCTCATGGATGCAAGC
TTCGAGTGA

Coding sequence (CDS) from alignment at Sc0000003:6011830..6013738+

>Blg00740.0 ID=Blg00740.0|Name=Blg00740.0|organism=Branchiostoma lanceolatum|type=CDS|length=630bp|location=Sequence derived from alignment at Sc0000003:6011830..6013738+ (Branchiostoma lanceolatum)
ATGGCTGAAGGAGGCATGATGAAGGAAGACATCCTGCAGGAGAAGATGGA
CATTGTGAGTGAGATGATCACCATGCTGGCTGCCGGGGAGCAGGCAGAGG
AGCTGGAGCGTGTCACCGAGGTGTGGGCAAAAATCAACCAGCTAAGAGAG
ACACAGGAGGAGGATGTCAAGAAAACCATACAAGCATTATTGGCTATGAA
TGAGGATGAAGAGCAGAAAGTGAAGAGCATCAGCCAATCAGAGGAAGCGT
ACCAACAGAAGGAAGCTGAGCTGGAGGCTGAGAAATCCCAGGCTGAGAAG
CAGAGACAACAGGCTGAACAGGGCGTTCAATATCCTTTTATGGGCATTCG
TCAGCTTGAAAAACTGAAGGACGAACAAGAGGCAGTAAGCAAGCAGAAGG
AGACTGTCAAACAGAACACAACAGAGGCCCTCCCTGATGTGAGGTATCTC
ACTACCCTGTACTCCAATGTGACCAAGCTGAAATGGGACTTCAGCAGTGG
ACCTGACGATATCAAGGGATTTGTGACCTGCAAGTCGGATGTGAAGCCCT
TCTCGCTGAACTCCAAGCAGAACTCCCAGTTCTTTGTGGCAAACTACCTC
TGGGACCTCATGGATGCAAGCTTCGAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00740.0Blg00740.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00740.0-exon-Sc0000003-1570713199:6011830..6012013Blg00740.0-exon-Sc0000003-1570713199:6011830..6012013Branchiostoma lanceolatumexon
Blg00740.0-exon-Sc0000003-1570713199:6012364..6012533Blg00740.0-exon-Sc0000003-1570713199:6012364..6012533Branchiostoma lanceolatumexon
Blg00740.0-exon-Sc0000003-1570713199:6012893..6012981Blg00740.0-exon-Sc0000003-1570713199:6012893..6012981Branchiostoma lanceolatumexon
Blg00740.0-exon-Sc0000003-1570713199:6013361..6013437Blg00740.0-exon-Sc0000003-1570713199:6013361..6013437Branchiostoma lanceolatumexon
Blg00740.0-exon-Sc0000003-1570713199:6013629..6013738Blg00740.0-exon-Sc0000003-1570713199:6013629..6013738Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:6011830..6013738 +
Properties
Property NameValue
GeneIDBlg00740