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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:1002845..1009902- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00787.1 ID=Blg00787.1|Name=Blg00787.1|organism=Branchiostoma lanceolatum|type=mRNA|length=7058bp|location=Sequence derived from alignment at Sc0000003:1002845..1009902- (Branchiostoma lanceolatum)
AGCGGAAACCCCTGGCAACGGTGGTCTCTCACCAGTGTTTATCACCCTCA
CACCGCAGTTCGGGATGACGTCAGGAGAAAGTTTGAAAAGATGGCGGAAT
CCGTGAATCCCGAAGACGCCGTGGCCAACGGTTGGATCCTGGAATTCGTC
TGCTACACGACTTGGAAAGAGTTCGTAGCTGGCGACGATTGTTTCTACCA
AGGCAGGGACTTTCTGCAAGGTCTGTGTTTGTGCTGTTGTTGTCTAAACT
CTAATAATACTCTAACGTAAACTCATGTGTGGCTGATCTGACTGTCAACA
CGATAATACGGTCCAGGTTTTTTAAGCTGGTCAGAGGACTGGAAATAAAT
CCTTTTTGTGTGACTTGTTCTTCACACACGAGAGGTCATAGTTTTAAACT
CAATGTTCCACTGGTGAAGAGCAGACTAAGAGGGCAGTCATTTCAGAACT
GTAATGGGAGCTGTTGTTGTTGTTGTTTTGAATAATGGAAGTTGGAACTC
CTCCTTATCACAGTTTGTTGCTGAAACTGTTTTAACTCATGATGGTGTTT
GCAAGCGTGTTGCTGGAAGATTTTGATTACAGATGTGATTGATCATGTGA
AAGTCTAGTGTGTGTATGTGTGTTCATTTGATATAAGTTTATAACGGGAG
AAGAGAAAGAATGTTGTCCATGTTTAGTGTCTATTTTTCCGCTACATGCA
TCACAAAGAAGATTTCATCATGCATCAAACAAACAAACAAAAAATCATAG
TTGTGCTGGCTTCGTCTGTGAGGTCAGATCTTACAAGCAGATTTCATATA
TCAACTCTCACATGATTTATGGATAAATACGCAAAAGATTGCTTTGTTAT
AATTTAGAAAAGATAATGAAATCCACAGATTTTGTTGTGTTAGAACTTAG
ATAGCCTTTATTGGCTAGTAAGTAGAATTTTAAGATTTACTTTGTATTTC
TATTTTGTAGTTTGTTGTTGACCGTACACAAGTTGCTTAATTTTTATTGT
GTCAATAAAGCTTCTCACAATAATATTTTTATTTCCCATACTTCGTAGGA
AAAGCCATCTTTAATACTAATAGTAATCCAAGTCACATAATTCGTAGTAG
GAGGGCAACCACATTTTGCGTAATTGCCTTCCTTGAATTTAGCGTAATAC
GTAGGGGGTTCTGAATTCAGCATAAAACGTTGTCGGAACCCCCATGCAGA
CCCTCACCAGTGTCCCTGTGTTCCCCAGGTCTGCTGGCGCGCAGTGTGGA
GTCGTCCCCCGAGAGGCAGCGAAGGGTCAAACTCATCCAGCTTCTGTGTC
GCCTGGCGGATGGGAGAGACCACAGCATACGGTACTTTCACTTTTAAACT
CTCACTTTCACCACATGCAGGTTACTGGTGTTAGTACTAGTAGATAAGAG
TACTAGTGTGGGTTTAATTGGGTGGGGGTTTTGTTTGGGGGCGGCTAAAT
AATGATCATTCATGGTATGAACTGTTAGCTATGTTCTTGCTACTTTATTC
ATTGTGCAGCTTTTTAGACTGCATTTATGATGTTGTGTTTGTCTTGAAGA
TTATACTCTGTGTATGTTTTGTAATCTGTGATATGCTCAAGCTCTGTGCT
ATCTGATATGTTATGTGGTGAACAATACAAGTGATCAGTGCCTGTACTCC
ACTTGTATAGACACTATAGTACCACCTCTGGCATCTTATTTGGTTCTTAG
CTAGTACAAGCTGCATATCCCAACAAATTTATTTGATGCACTCACACGAG
GAAGGACCCCTACTATTTCAGGAAACTGATAAGTGTGGTGGTTTCTTTTA
CTGACTCAGAAACTGCTCCCCTCTTTATTTTAAGATACGATGAAGACGGT
GACATCACCGCTTTAGAGTCCTCGCTCCCGATCTTTGACGCTCTGGTGGA
AACCGCGGACCTCCCTGCCGACCAAGTGGCACATGCCAGGGGACTGATGA
AGGTATGATATATAATATTCTAACCCCCAATTGTTATGATGTCTACCTTC
TTTGCATGTTGTTTTCGCACGTTTCTCCCTTCTCCGTTCCAATCAAATGG
TGCTCAGTTGTGCTCTGTTTATATACGACAAGGTATAATTCAGTCCCTGG
CTGCTAGTCTCCTGTTTTTAACAATAAACAATCGATTGATTCACAGGTGC
AGAGTGTGCTGGTGTGTTGCCGTGACAACGACTTTGAGGCAGCGGAGGAA
GTGTTCCAGAGAGTCTGGCCAGCCGGAAGTAAGCAGGGCGCAAAGGACAA
GAAACTTCGCACGGAGGTGGGCCGTCATTAGATGAATGAACAAATGAATG
GTTTATTGAATCATGAGTGAATAGGTGAATAAAGGAATGGTTTATTGAAT
GAATGAATGAAGGAATGGTTTATTAAATGAATGAATGAATAAATGAATGA
ATGGTTTATTGAATGAGTGAATAAATGAATGGTTTATTAAATGAATGAAA
TTAGTATATTGCAGCCATAAGCTGTTTCTGATAAGGGTACTGTGCAGAAA
GTAAATTTTATGGCCAGCTGGCTTGGTAGTATTTCAAGAATTTCTCTTAG
AATGTTGGTGTTTCATCAACCTCCTTCATTCACCTTGGTGTGTTAGTGTG
TAGTTTGTAGAATGTTCCTTGCCTAAACATATTATTAACAGATCCCAAAC
ACTCTCATCTGGGGTTGTCTGTGCCTTTGGTGTATAGGTGTAGTTTGTAG
CTTCTGTTATGTGGTAGAATGTTCCATACTGATACCAGTTTGTTCGTGTT
TGCAGGTTAACGCAGTGCTGAAGTCCAGGAACCCGCACCACCCCATCATA
CAGAACCGACGACCAGTTCCTACAGATCATGGCAGACTTCCTTCATGGCA
CTGGTAGAATGTTCCATACTGATACCAGTTTGTTCATGTTTGTAGGTTAA
CGCAGTGCTGAAGTCCAGGAACCCGAACCACCCCATCATACAGAACCGCT
GTCCCTACGACCAGTTTCTACAGATCATGGCGGACTTCCTTCATGGCACG
GGTAGAATGTTCCATACTGATACCAGTTTGTTCGTGTTTCCAGGTTAACG
CAGTGCTGAAGTCCAGGAACCCGAACCACCCCATCATACAGAACCGATAT
CCCTACGACCAGTTTCTACAGATCATGGCTGACTTCCTTCATGGCACTGG
TAGAATGTTCCATACTGATGATACGAGTTTGTTTACAGGTTAGCGCAGTG
CTGAAGTCCAGGAATCCGAACCACCCCATCATACAGAACCGCAGTCCCTA
CGACCAGTTTCTACAGATCATGGCTGACTTCCTTCATGGCACTGGTAGAA
TGTTCCATACTGATACGAGTTTGTTCATGTTTGCAGGTTAGCGCAGTGCT
GAAGTCCAGGAACCCGACCCACCCCATCATACAGAACCGATGTCCCTACA
ACCAGTACCTACAGATCATGGCAGACTTCCTTCATGGCACGGGTAGAAGG
TTCCATACTGATACCAGTTTGTTCATGTTTCCAGGTTAACGCAGTGCTGA
AGTCCAGGAACCCGCACCACCCCATCATACAGAACCGATGTCCCTACGAC
CAGTTTCTACAGATCATGGCAGACTTCCTTCATGGCACTGGTAGAATGTT
CCATACTGATACGAGTTTGTTCGTGTTTGCAGGTTAGCGCAGTGCTGAAG
TCCAGGAACCCGCACCACCCCATCATACAGAACCGATGTCCCTACGACCA
GTTTCTACAGATCATGGCAGACTTTCTTCATGGCATTGGTAGAATGTTCC
ATACTGATACGAGTTTGTTCATGTTTACAGGTTAGCGCAGTGCTGAAGTC
CAGGAACCCGCACCACCCCATCATACAGAACCGGTGTCCCTACGACCAGT
TCCTACAGATCATGGCAGACTTCCTTCATGGCACTGGTAGAATGTTCCAT
ACTGATACAAGTTTGTTCATGTTTACAGGTTAGCGCAGTGCTGAAGTCCA
GGAACCCGCACCACCCCATCATACAGAACCGATGTCCCTACGACCAGTTC
CTACAGATCATGGCAGACTTCCTCCAGCCGATCGTCGACGACTTCAAGTC
GCCATTTTTACTGAAAGCTGCACAGCGAGTGGTGAGGGACAGGTAACAAG
AATTCCCCAATCTCAGGCTACGCCGCTACGGTCACATACTGTAAATGTAT
TTAACTTAAGGGAAAATGGAGTGTTTGGGATGGTTTTAACTATTAAGTTC
ATGGCAGCACTATAGTCCCATACTGTTAGAAGTGGACAAAAATGTTTGCA
GTGGTTTTGATCCACGAAAACCATGACCATAAAACCAGTGCAAACATTTC
TGCATTTACAGTACATCGTACGTCGTACAGCCGTCATGATAGAGCCGTAT
GTCGTATGTTTGAGAAAAAACGGGTGCAATGATTTGAATATATAAAGTCG
TGGTCACATACCTCGAAGGTACATCGTACGATGGGTTTAGTGAGTGTTCC
TGGGTCAATCGCAGGTGAATCGCACATAAAACTAACCATCGCTTGTGTTT
GATGAGATATGGTACAGTGTACCCAATTGAGCTTAAGCTTTTAGCTGCCA
CGTAATTATAACACTTGTTATTAATAAACCATTCATTCATTCATATAGGA
TAAAAGCTGCCGACTGTCCAGAATCTGAAGTCGTTGAATCCGAGAGTGAC
TCGGACGCGTACGAGACGCCTTCGGAGAACGAGACGCATCCCGAGGGACA
GGAATTCGTCTTCAAGTCGCGCCGGCTTCTTCGGGAGTGCTTCATGGTCA
TGGCCAAGGAGGAGAGGTCAAGTGCAGAGTGGAGGAAAGACATTGTCGAT
TACGACTACAGTAACCTGGCGAGGGATCTGAGACAGACCCAGGACGCAAC
AGCATCGAAGTCTACTGTCAGGAGAAGCCCACGGAAACACAGACAAACAG
AAGAAGAAGAAACGTCAGAGCCTGAGGCAAGTAATAATGATAAGACTACA
AGCCAGAGCCGACCTAAGGAAATGCAGACCCAGGCAAAAGCATCAAAGTC
TACGGTCAGGACAAGTCCGAGGAAACACAAGCAAACAGAAGAAGAAGAAA
TGTCAGAGCCTGAGGCAAGTAAGGCTATGAGCCGACCTAAGAAACAGACA
ACATCGGAAGGTACAACAGCCCAGGGCTTGATTCCATCAGATTCAGAGCG
GAAACACAAACAAACAGAAGAAGAAGAAACACCAGAGCCTGAGGCAAGTA
AGACTAAGAGCCAACCTAAGAAACAGACAGCATCGGAAGGTGCAACAGCC
CAGGGCTTGATTCCACCCCCTGAAGAACTTACTAACAGACTCACAAACGG
CCAGACTGAAAAGCGGAAACACAGAGACCGTGAGGAAGACTGGCACAGAG
ATCCCATCATGAACGATCAACCATCGACCAGCGGGCTAGGTAAGAACGTC
AACAGTCGCGCGAAGTACCGCCGGGTTATACAGAATGATGACAGCGAGTC
CGAAGACGAGTTCACGAGGGAAAACGCGGCGCAGAGGTCAAAGTTCAAGA
AATGGAGCCGAGGCAACGACGCATACGGGAACGGAGTGAAGGAAACGTGG
AGTTCAGACGAGGAGACGTTCAGGTGAAACTTTTATTCTACGGAATGTTT
CTTTTGTGTTAATTTGTGGTATTTTGCTTTTATACATATAATTATTGAAT
TTCTATAGCTTACCCATTGATATATATATTATTTTTCTTTTTTATATCTT
TAGTTTGTTGCCATTAATTTATTGATATTTATTGTGTAGTGTAATGATTA
ATGTTTCATTTTCAAAATTGCATCAAACTCTGCAATTCAGGGTGTTCTTC
CCCTGCCCATGTACGTTTGCGCTTGGTGATAATGATGATAATAAACCAAC
ATTCATGAACGTTTTCAGGTCTCCCGTGAAGAAGAAGTACTATGTGTTCG
AGTCGGATTCAGAAGAGGAGATACCGACCAACCTGCCCTGCACCGCGGCG
AGTCTGCACGTGCCCGTCATCCCCGCCAGGCTTCGCATTATTACAAAATC
TCCGCCGGACATCACAAGGTCGGCAAGAGCTCTGTTTTTCTTCTTGATCT
GTTACTGAGCAACACCCCTCTTGTTGGGGTAAAGCGCCCAGGGGAGTGTG
CTGCGCTTATTGTCCTCTGAGGTACTGGAGCACCGCCTCCTTGAACTTGG
GAGGGTCAGTTGTCTCCGTGACCTCTTGTGGCAGTGAATTCCATTCTCTC
ACAGTTCGAGGGTAGTAAGAATATCTGTAGCAGTCTTTGTGGAATTGTAG
ACTCTTGTATGAATTTTGGTTTGAGTGTCGCGATTGGCGCGGTGCAGGTG
ACAGATGACCTTCGACCGGTAGGTTCGACAATATCGTGCATTACATTCAT
GTCTACAATTCATTACTAGTGCTGTGTACCTCAACTTGTGTTTAGGTTCA
GTTCCGGATTTAGATCCAAAGGTACAGGTTCAGGTCCGGACTTATAAATC
CATACCTCAACCCATGGCAAATGTGTTCTAAAAATATTTTTTTCTCCTTG
TTAAATGTAAAATCACATGTTGCCATATATTTTACATGCAATTTGAAGAC
TAGACAATCAGTAGTAAACACAAAAAAACAGCAATGTTTTCATATTTTTC
CAGTGCAAATTTCACGATCTATGAAAGGCTTAAGATGGTTTAAAACAGGA
GAGTATAAGCTAGGGATAGTCCGGACTTGTTTCCAGACGTTTAGTTTTTT
TGGGACTTGAAACACTGCTGCAAACTTAAACCACCGCGAACACTCTGTTT
TCGCCTTAGCGCGAAATAAAAACCATGCGAACTTAAATGCATTTACAGTA
TTATTTTATGAATGAACCATTCTCTCTCTCTTTCACCAGGAAGGGGTACC
TTCGCCAGCGGCACCAGTGGACGGACTCGGAGGTCGAGAACCTGATCAAA
GGTGTGGAGAAGTACGGGCTGGGCAACTGGGCAAAGATCAAGGACAACTT
CCGCTTCAACGGCCGAACAAACGTCAACCTCAAAGACAAGTGGAGGCAAC
TGATCAAATCTGGGGCGGTCGAGGAATTTCCCTAGAGGAATTCAATTTAG
TCAGAAGC Coding sequence (CDS) from alignment at Sc0000003:1002845..1009902- >Blg00787.1 ID=Blg00787.1|Name=Blg00787.1|organism=Branchiostoma lanceolatum|type=CDS|length=1818bp|location=Sequence derived from alignment at Sc0000003:1002845..1009902- (Branchiostoma lanceolatum)
ATGGCGGAATCCGTGAATCCCGAAGACGCCGTGGCCAACGGTTGGATCCT
GGAATTCGTCTGCTACACGACTTGGAAAGAGTTCGTAGCTGGCGACGATT
GTTTCTACCAAGGCAGGGACTTTCTGCAAGGTCTGCTGGCGCGCAGTGTG
GAGTCGTCCCCCGAGAGGCAGCGAAGGGTCAAACTCATCCAGCTTCTGTG
TCGCCTGGCGGATGGGAGAGACCACAGCATACGATACGATGAAGACGGTG
ACATCACCGCTTTAGAGTCCTCGCTCCCGATCTTTGACGCTCTGGTGGAA
ACCGCGGACCTCCCTGCCGACCAAGTGGCACATGCCAGGGGACTGATGAA
GGTGCAGAGTGTGCTGGTGTGTTGCCGTGACAACGACTTTGAGGCAGCGG
AGGAAGTGTTCCAGAGAGTCTGGCCAGCCGGAAGTAAGCAGGGCGCAAAG
GACAAGAAACTTCGCACGGAGGTTAGCGCAGTGCTGAAGTCCAGGAACCC
GCACCACCCCATCATACAGAACCGATGTCCCTACGACCAGTTCCTACAGA
TCATGGCAGACTTCCTCCAGCCGATCGTCGACGACTTCAAGTCGCCATTT
TTACTGAAAGCTGCACAGCGAGTGGTGAGGGACAGGATAAAAGCTGCCGA
CTGTCCAGAATCTGAAGTCGTTGAATCCGAGAGTGACTCGGACGCGTACG
AGACGCCTTCGGAGAACGAGACGCATCCCGAGGGACAGGAATTCGTCTTC
AAGTCGCGCCGGCTTCTTCGGGAGTGCTTCATGGTCATGGCCAAGGAGGA
GAGGTCAAGTGCAGAGTGGAGGAAAGACATTGTCGATTACGACTACAGTA
ACCTGGCGAGGGATCTGAGACAGACCCAGGACGCAACAGCATCGAAGTCT
ACTGTCAGGAGAAGCCCACGGAAACACAGACAAACAGAAGAAGAAGAAAC
GTCAGAGCCTGAGGCAAGTAAGGCTATGAGCCGACCTAAGAAACAGACAA
CATCGGAAGGTACAACAGCCCAGGGCTTGATTCCATCAGATTCAGAGCGG
AAACACAAACAAACAGAAGAAGAAGAAACACCAGAGCCTGAGGCAAGTAA
GACTAAGAGCCAACCTAAGAAACAGACAGCATCGGAAGGTGCAACAGCCC
AGGGCTTGATTCCACCCCCTGAAGAACTTACTAACAGACTCACAAACGGC
CAGACTGAAAAGCGGAAACACAGAGACCGTGAGGAAGACTGGCACAGAGA
TCCCATCATGAACGATCAACCATCGACCAGCGGGCTAGGTAAGAACGTCA
ACAGTCGCGCGAAGTACCGCCGGGTTATACAGAATGATGACAGCGAGTCC
GAAGACGAGTTCACGAGGGAAAACGCGGCGCAGAGGTCAAAGTTCAAGAA
ATGGAGCCGAGGCAACGACGCATACGGGAACGGAGTGAAGGAAACGTGGA
GTTCAGACGAGGAGACGTTCAGGTCTCCCGTGAAGAAGAAGTACTATGTG
TTCGAGTCGGATTCAGAAGAGGAGATACCGACCAACCTGCCCTGCACCGC
GGCGAGTCTGCACGTGCCCGTCATCCCCGCCAGGCTTCGCATTATTACAA
AATCTCCGCCGGACATCACAAGGAAGGGGTACCTTCGCCAGCGGCACCAG
TGGACGGACTCGGAGGTCGAGAACCTGATCAAAGGTGTGGAGAAGTACGG
GCTGGGCAACTGGGCAAAGATCAAGGACAACTTCCGCTTCAACGGCCGAA
CAAACGTCAACCTCAAAGACAAGTGGAGGCAACTGATCAAATCTGGGGCG
GTCGAGGAATTTCCCTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00787.1-exon-Sc0000003-1570713199:1009683..1009902 | Blg00787.1-exon-Sc0000003-1570713199:1009683..1009902 | Branchiostoma lanceolatum | exon |
| Blg00787.1-exon-Sc0000003-1570713199:1008572..1008674 | Blg00787.1-exon-Sc0000003-1570713199:1008572..1008674 | Branchiostoma lanceolatum | exon |
| Blg00787.1-exon-Sc0000003-1570713199:1007951..1008068 | Blg00787.1-exon-Sc0000003-1570713199:1007951..1008068 | Branchiostoma lanceolatum | exon |
| Blg00787.1-exon-Sc0000003-1570713199:1007637..1007756 | Blg00787.1-exon-Sc0000003-1570713199:1007637..1007756 | Branchiostoma lanceolatum | exon |
| Blg00787.1-exon-Sc0000003-1570713199:1005811..1005974 | Blg00787.1-exon-Sc0000003-1570713199:1005811..1005974 | Branchiostoma lanceolatum | exon |
| Blg00787.1-exon-Sc0000003-1570713199:1004977..1005304 | Blg00787.1-exon-Sc0000003-1570713199:1004977..1005304 | Branchiostoma lanceolatum | exon |
| Blg00787.1-exon-Sc0000003-1570713199:1004330..1004838 | Blg00787.1-exon-Sc0000003-1570713199:1004330..1004838 | Branchiostoma lanceolatum | exon |
| Blg00787.1-exon-Sc0000003-1570713199:1003885..1004034 | Blg00787.1-exon-Sc0000003-1570713199:1003885..1004034 | Branchiostoma lanceolatum | exon |
| Blg00787.1-exon-Sc0000003-1570713199:1002845..1003063 | Blg00787.1-exon-Sc0000003-1570713199:1002845..1003063 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:1002845..1009902 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00787 |
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