Blg00789.0 (mRNA) - B. lanceolatum

Overview
NameBlg00789.0
Unique NameBlg00789.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Full-screen view
Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:4999505..5000794-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00789.0 ID=Blg00789.0|Name=Blg00789.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1290bp|location=Sequence derived from alignment at Sc0000003:4999505..5000794- (Branchiostoma lanceolatum)
ATGTATGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGCGTGTGTGT
GTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGT
GCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGC
GTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGT
GCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTNAGGGA
TTCTTAACAAGTAGAATTGGTATTTTTCCGTTATCATCATTACTATCATT
AGTATTCTTTATTTCATGTTAATTTTGTTTGTATTTGACTGTACGTATAT
ACTACTTATTTCATCTATCTATGTATGACGCAGGGTCTCACTGCAAAGCT
GTCAATGAGCTGGGCGACCCTGGATAGATATCACAGAAAATGAAATAGAA
AATAAGATAAAAGTTGAAAAGTGACGTTTTAACTGTTCTTGACCAGTGTC
TGCTGCGAGGCTGTCGGGAGAGAACACGACAGAAAAGCAGCCCGGAGCCG
GGCCGGGGGTGGAGGGGCAGGCGGGGCAGTACGACTGGCAGCCCGATGAG
GAGGCGAACCTGTGCCAACGGTGTCTACAGACAAGGTTCACATTGTTAGA
AAGACGGGTACGTATATCTCAATTTAGGGCATGCTGAGATGCAGGCCTAT
GGAAAGGAAGTGAGGGACAGGGAAGACGGGGGGGAAGAAAGAATTTGGAC
TTTTACTTGTATGGGGTGTAAACATGTATTAATAAATCTATCTCAGTAGC
GAAGTTTGCATTTTACAACATACATGTATTAATAAATCACTGCGTACGAA
CTACATATGTTCAACTTACATGGAATAGACCAATCCTGCATTTAGTAAGC
GTCATATTTCCAATTGTATGTACAACAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAACTTTTCACAATGTCTATCGTAAGCAAAGAGATACACAGAG
AGAGAAAAAGTTTAGCGTTTATATATTTGCTATATTTGTATCTGCCATCT
GTATTATTTGTATTTGTAAGCTGCCATCATCATCATTTGTATCATTCCCT
ATTGCAGCATCACTGTCGGAGCTGCGGTAGAGTGGTCTGTGCTGACTGTT
CCAATCGGAAGGAGGTTGTCCACCAGAAGGCAGTGCGCGTCTGCAACATC
TGCGCGGAGAACCTACAGAACATCAGACTCCCTCCGGACAGTCGAGACAG
CGGAGACTCGGAGGGAGAGTCGGAGAAAACAGAGAAATAG

Coding sequence (CDS) from alignment at Sc0000003:4999505..5000794-

>Blg00789.0 ID=Blg00789.0|Name=Blg00789.0|organism=Branchiostoma lanceolatum|type=CDS|length=582bp|location=Sequence derived from alignment at Sc0000003:4999505..5000794- (Branchiostoma lanceolatum)
ATGTATGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGCGTGTGTGT
GTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGT
GCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGC
GTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGT
GCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCTGTCTGCTGCGA
GGCTGTCGGGAGAGAACACGACAGAAAAGCAGCCCGGAGCCGGGCCGGGG
GTGGAGGGGCAGGCGGGGCAGTACGACTGGCAGCCCGATGAGGAGGCGAA
CCTGTGCCAACGGTGTCTACAGACAAGGTTCACATTGTTAGAAAGACGGC
ATCACTGTCGGAGCTGCGGTAGAGTGGTCTGTGCTGACTGTTCCAATCGG
AAGGAGGTTGTCCACCAGAAGGCAGTGCGCGTCTGCAACATCTGCGCGGA
GAACCTACAGAACATCAGACTCCCTCCGGACAGTCGAGACAGCGGAGACT
CGGAGGGAGAGTCGGAGAAAACAGAGAAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00789.0Blg00789.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00789.0-exon-Sc0000003-1570713199:5000557..5000794Blg00789.0-exon-Sc0000003-1570713199:5000557..5000794Branchiostoma lanceolatumexon
Blg00789.0-exon-Sc0000003-1570713199:5000138..5000298Blg00789.0-exon-Sc0000003-1570713199:5000138..5000298Branchiostoma lanceolatumexon
Blg00789.0-exon-Sc0000003-1570713199:4999505..4999687Blg00789.0-exon-Sc0000003-1570713199:4999505..4999687Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:4999505..5000794 -
Properties
Property NameValue
GeneIDBlg00789