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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:3493017..3496979+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00801.2 ID=Blg00801.2|Name=Blg00801.2|organism=Branchiostoma lanceolatum|type=mRNA|length=3963bp|location=Sequence derived from alignment at Sc0000003:3493017..3496979+ (Branchiostoma lanceolatum)
GCATTTCATATTCGTGTTGAAAGACCGTGGTGTGTTTTCCCCCGTGCTAA
AAATCATGAAGTTCTTCGCAACGGCTGCAGTTTTGTTTCACCTGTGTATG
TCAACATTCGCAGTCCCCCCACGGGAGCGGGGGAGCAGCCGTGGATGGAT
AGGTGAGGTTCAAGTTTGCTCATTTTTATTTCCTACGAAGTTTGGTATCA
GTAAACTGCGTCATGTTTAGAGACGTAGAAGAAGAAAAAACTCGACCGGA
CAGAAATAGGTCAACTATAGCTAGAAGAGGTCTTCACCATGAACCAAAGA
CATCTGTGCAAACAGACGTGTTGCGTTAAAAGGGCATCGAATAAATGTTA
GACTATTTACTGTTTTAAGAAGAAGAGCTAACATTTATTCCGTTGGGTTA
AGCATTATGCTCTATAATCTTTTGCTTTTGTATACTTTGAAGAACGCATA
TATGAAATTGTAAACTGTAAAATGAACTACAATCAACGATGTAAAAAGAT
AACTTAGATGTATGATGCTTCATGTTAATGTATTGATTTCACACGTACAG
GTTTCCTTCCTCGTCGGCATCCGCTTCCACGTGAAGGAGGTAAGATTTCT
GACTCAACGTTCAAAAAAAAATCAGCGATGCTTAATTGTGCCAACTTAGA
GCTAACTTGGATGTGATATACAAGGCCATACAATATCATGACCTGGCCAA
CGAACAACGTTAAACATCAAAAGAAATATTGTTCATATGCAAGATCTCTA
GCAATACATAATGATTTGTATTGTATTCTATGTAATGTTATGTGTTACCT
TGCTGCTTATGTTATGATCCCAGTAACAGCTCATAAAAACAAAATATTTT
TAATAAAATTCGATTCAATCTCTTCCCAGAATGCCCCGACGGCATGCCCA
TTGTGCAGTGCATGCTGGACCCGTGTGACGTAACCACCTGTCCCGGCAGC
CCCCGCGCGAGATGTGAGCATAACTTCTGCGGAGGTTGTAACGCCGTGTT
CTACGACAAGTCTGGATCTGTGGCGGATTGTAACGGAGATGGTATGTACC
CTTACAAATCATGTTATGTAATAAGTACTAGTTGTAATTTTGTATTTTGA
TATACCGGAGGGATACCTGAAAACAGGTTTTTACATGACAGTGAGTGTAT
TTTTCCTGTATAGATAAATAAATGAATGAAATGAAATGTAAAATACATGA
ATAAGAATCAGATCGCATGAATGATCTGTTTAATCAAAGACAAATTGAAG
TCAAATAGAATAGAATAGAAGAAACCATAAAATTGAGTTTAAACATCTTA
CTTAAAAAAAAACTTTTTACATCAGTTTAATTTTACGTAGTTGCTACCAC
GCCCACTTTCCTAGCTCCGAACACAAAATTTGTCATTTTTCAACAATCTT
AAACTACCACATGGATCTTATATCATGTATATAGACTATCATTTTGGAGA
AAAAATGTTTCAATTAAGAATTAAACATTTGCGAAGGTTCAAACAGTGAG
ATTTACCATTTAAAAGCCATTTCCTTAAATTCTCGCAGAGTGGAACTACC
ACACACATTGTCAAGAAAAAATTCATTTCATGACCTCATATAACCCCTAG
GTTGCCCGGATGACCAGCCCATGGTCCGATGCTTTGTGGATCCGTGTGAC
GTCACCGCCTGTCCAGCCAATCCCGACGCCGCCTGTGTGGCTGACTACTG
TGGGGGTTGTACCGCCCGCTTCTTTGACAGAACCGGAGAGCCCGCCTGTA
TGGAAAACTTTACTTTTTGGCATCTTAACTGTGATTTCTTTCTTTCTGTT
CCTCTTATCTTTCCGTTTCTCTGAATTTGCTCTTTGGGGAGTGAAAGTAC
AACACTACTTGATATGATAACACTTTTACACAAAGTAACGACGCGGCATC
TTATGCTAGGGTCACATTTCCAAGCCGGGGCCCGACCGGGCTGTTTGAGA
AAACTAAGAATAAAAGGCGCATATCAAGAATATACGTACTTTATGGTAAG
GAGTATTTTTTTACGCTTTGTGTGTTTCTTTGTCTTTTATGTCGAATTTT
TCGTTTCCAAAAGCTACCCGGCCGGGCCCCGCTTTGGAAATGTGACCCTA
GCATTAGCTGTGATTTCATCCTTTCTCTTCTTATGTCTTTCCGTTTCTCT
GATTTTGGTCTTTGGGAAGAGAAAGTGCAACAAATAAAAACATAATAAAG
ATGGTCCAAACGTAAACGGATGAAACATAAGCTTAATCTTAGCTGTGTTT
TTCCCTTTTCCTCTTCTCTTTTTGAAACGTTGGCGGTGGCTTTATTTTCG
TGGATTTTGCTCTGTGTTAGTTGGAAAAGACATCAGCACAGATGAATACG
ATTCAAGCGTAAACGCGTAACATTATACAAATATTACATATAATGGAGCG
AAATCATCAAGAGGTCTCTATTTCATGGTTTCTTATTCTTTCTTTTCGTA
TTTTTTTTCTTTTCTCTTTTATGGTTCATGCCGTGTGTTCTATTGTAGTT
CCACGGGCAAGCATTTTATCTTCAAAACTGGGGGACGTTTTGTGTTCTTG
TGCTACAGTGTATGTACTACAAGAGGATAGATGGATTAGAATTCAGCATA
ACATGTGGTCACAATAGTACCTTTTACAAATCCTGGTTTCACCTTTCTGT
CCCATTGTTTGAAACGTGTAAACAAGATGACTAGACTGAAATGATCCTAC
TCGCGAAACAATACAAGTGGTCTCACTTTCGTCGCCATTTTGTTTTGACA
CCACGTCACAGGTTGTGGCGGGCAAGGTCAGTCATGTGACACCGGACGTC
CAATAGGAAGAGAGGACGACTGCACCTGCCAGCGAGGATTGGTGTGTTTT
CCCAACGACGGCTCCTTTACCAAAGGAACGTGCCAGACTGAAGAATGGGT
GGAGGAAAACGGAGGTCTGCCGCCGCAACCCATCGGTTAAACCAACTGTG
CCTTGTGAATATCATGCAGGCTCATAGAATAGGAAGAGAACTTTATTGCA
CTACACTCGTACACGAACAAAACTTAACATCCTAATTACTAAATACAATG
AGAGCTAGCATAAGTCTGTGATATAGTGTAACAATCGAGTGAGGCTTATC
ATGAGTTTCAGTATTTTTGTAATAACAAAGCAGTCTTTTAAACTACAGAC
TTTATCTACCTATTTTTGCATTGTAGGAATTGTTGTATTTAAAGACGTAT
TCAGATCTGTCTGTACATCGAGTCCTTTGAAATCTGTTATGTGCCTATAA
TAAAGGGATAGTACAACGCTTACCATTTCTGCTAAAATTTCCCATCGTCC
ATTTGTTGTTTTTAATTGTAACCCGCCCCATATGCCGTCATTAAAGAGAA
TTTCTCCTGTTACTATTGCATTGAGATCATCCCGCATGTCATAAGAATGG
CGAAAACGACAATAGACCAGATCGTCATGTACGCCCCCTTACGTACCTGG
GCTGTAGTGCAGATGGTAATGTTTTTTTGAACCACAGAGGCATTCAGCAA
TGAATGAAATAAATAAATGAATGAATGAATGAATGAATGAAAGGTTTATT
GTGATATCTATCATTATGATCCGCTTAGACAAGTACATAGCAGCCAAAGC
CAAAGGGCTGAATTGCGTACTTTTTTCCCACAAATGATTCTTAAAAACAA
ACTGTTTTCTAGTTTCACAAGTAACAACATATCAGTTGTAGAAGATTTAA
AGTTTTAAATCTTACCCATAATAATGTTGCTCGAAAGACACAATTATGGA
GTATCGCTACTAATCTCCGAAAAAAAGCGGAATAAAAGATATTGGTCCTC
CATGCCATCATTTTAGATTTCTGCACGTTTTTGTGGTATCAATAATGTTT
GCTTATAATCTGTGTGAGGTCATAAGATTCTTATCATAACAGTGCTCTCG
CTCAGAATTATAACGAATGGCAGGAACTATAGAATGAACGTCCCGACCAC
GTTGTCAAGCGCG Coding sequence (CDS) from alignment at Sc0000003:3493017..3496979+ >Blg00801.2 ID=Blg00801.2|Name=Blg00801.2|organism=Branchiostoma lanceolatum|type=CDS|length=585bp|location=Sequence derived from alignment at Sc0000003:3493017..3496979+ (Branchiostoma lanceolatum)
ATGAACCAAAGACATCTGTGCAAACAGACGTGTTGCGTTAAAAGGGCATC
GAATAAATGTTTCCTTCCTCGTCGGCATCCGCTTCCACGTGAAGGAGAAT
GCCCCGACGGCATGCCCATTGTGCAGTGCATGCTGGACCCGTGTGACGTA
ACCACCTGTCCCGGCAGCCCCCGCGCGAGATGTGAGCATAACTTCTGCGG
AGGTTGTAACGCCGTGTTCTACGACAAGTCTGGATCTGTGGCGGATTGTA
ACGGAGATGGTTGCCCGGATGACCAGCCCATGGTCCGATGCTTTGTGGAT
CCGTGTGACGTCACCGCCTGTCCAGCCAATCCCGACGCCGCCTGTGTGGC
TGACTACTGTGGGGGTTGTACCGCCCGCTTCTTTGACAGAACCGGAGAGC
CCGCCTGTTGTGGCGGGCAAGGTCAGTCATGTGACACCGGACGTCCAATA
GGAAGAGAGGACGACTGCACCTGCCAGCGAGGATTGGTGTGTTTTCCCAA
CGACGGCTCCTTTACCAAAGGAACGTGCCAGACTGAAGAATGGGTGGAGG
AAAACGGAGGTCTGCCGCCGCAACCCATCGGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00801.2-exon-Sc0000003-1570713199:3493017..3493362 | Blg00801.2-exon-Sc0000003-1570713199:3493017..3493362 | Branchiostoma lanceolatum | exon |
| Blg00801.2-exon-Sc0000003-1570713199:3493567..3493605 | Blg00801.2-exon-Sc0000003-1570713199:3493567..3493605 | Branchiostoma lanceolatum | exon |
| Blg00801.2-exon-Sc0000003-1570713199:3493896..3494057 | Blg00801.2-exon-Sc0000003-1570713199:3493896..3494057 | Branchiostoma lanceolatum | exon |
| Blg00801.2-exon-Sc0000003-1570713199:3494617..3494763 | Blg00801.2-exon-Sc0000003-1570713199:3494617..3494763 | Branchiostoma lanceolatum | exon |
| Blg00801.2-exon-Sc0000003-1570713199:3495778..3496979 | Blg00801.2-exon-Sc0000003-1570713199:3495778..3496979 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:3493017..3496979 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00801 |
|
