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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:4712418..4717504+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00840.0 ID=Blg00840.0|Name=Blg00840.0|organism=Branchiostoma lanceolatum|type=mRNA|length=5087bp|location=Sequence derived from alignment at Sc0000003:4712418..4717504+ (Branchiostoma lanceolatum)
ATGAGTATCTTGCAGGAAGTCGTGACGACTGTTCGTCACTATGCCGACCT
CCCGACATGTCTGCTGGCCACATGTGCGTGCCTGCTGACGTATCTGTACC
TCCGGCGGCCCAGGAACCTCCCACCCGGACCCTGGGCCTGGCCGCTTGTT
GGGAACATCCCCATGTTAGCTAAGGTGAGCACGAAACGCCCTTATTTCCT
TCTTTTACTTATTTGTTTTATGGTACATTACGGTACCCGAACACTTTACA
ACACGTTAGGAACAAGCCTTTGTATGTAAAACGTTCAGATATTTTTAGAT
ATGACCTCGATATACAATCGAGTTTGGCTAATCATTAGTTTCGGTATGCT
TTTTAATGACAAAGCAGTCTTTTATATATTTACCGATTTTTGCATTCCGG
GGGTTGTTGCATCTTAAGATATATGCAAGTAAGTATATAAGTAAGGATGC
AAGTAAATATAGTACACTTTTTTCTCAATTTATTTCCAGTCCGCCTTCCT
TCCTGCCACTTTTACGGAGCTGTCCAAACAGTACGGTGACGTCATGACCC
TGTGGAACGGCGGATCTCCTTTCATCGTCCTGTCTGGGTACGAGACTATA
CGGACTGCCCTGGTCAAGAGAGCTGAAGATTTCTCCAGTCGTGGTTGCAA
TGCAGGAGTGGCGGAAGTGCGCAAGGACGGCAAAAGAGATGAAGGTAATT
CATCATTTTTATCTCCATGAAAAATGGAGATACATGTATAGTTTTGGGTG
TGTCTGTCTGTTTGTCTGTCTGTTTGTCTGTTTGTGTTTCCGGACTACTG
TACTCAGCATAACGAAAGAATCTCTTGATGGATTACGATGATATTTAGTA
TGTGGGCAGGTGTTGTGAAGCCGAAATTCAAGGTCGATTTTGGGCCCCCT
GGTATGTGACCTTGGTACTGCAGCAGAAATTCCATTTTTGTATGTCTTGT
TATGTATGCGTTTTGACCATACTATATCAAACAAGTCCATCCAAACAAGT
CCAACCTTTATGTTTAACATCACAAAGAGACGAGAAGAAGCCGAACCTAC
GTATTAGAGTAGTTTTAGAACCAATGTTTTAGCTTATTATCAGAAATCCT
GTCAGTGTCATAAGATTATTATCTGTACTTTATTACGGCTTTTGTATCTG
TATGCATGTATATAACACGGATTGAAATCGACCCGGTAACAAATAGGCGC
CGTGAGCTTATCGTGAGAACACCGAGAGGTACCCTTCCGGTGCCCGGCAG
TCCTCCGCTACACCCTCTACGGGCACCGGTGCAAATGTGAACTAAGCATT
ACTCTGCGTGTTTGTATTGGAAACAATATCAACGTTATGAAAATGTCATG
AAACGATCCTTTAGTTGCAGGTTTCCTGATGGCCCCCTACGGACCATGCT
GGAAACGGCAGCGCAAATTCGCCGTCATGACTCTCCGGGACTTCGGCGTC
GGCAAGCGGAGTTTGGAGGGCAAGGTCATCGAGGAAGCGAACGCGCTGGT
CCAGGAAGTTCTGTCGCAAAACGGAGGACCGTTCGATCTAAAGATCTTGA
TGCAGACCGCTGTCTGTAACATCCTTTGCTCGGTCGTCTTCGGAGACCGT
TTCGAGTACGGGGACCCCGATATGCTGCGCCTGCTTCGCCTGCTGAACGT
CACGATTGAAGCAGGGCCCACCGCCATCGACCGTCTCACGAAGGTCGTTA
CAAATCCCACCTCTTGTCCTGATCTTTTGTCCTGACCTTGAGTTCACCTC
CGATCAACCTTCCATCTATTCCACCACGATGCTGTAAATTATATTAGATC
ATTCCCCCTACGATTTTATTATGACGATGTGCTCACGTATTTACATGGTG
GTTATTGATTCCAATGATTGTGTACTGTATCATTATGCATTGTATTGTAT
TCTATGCTATGTATGGTGTAATGATTTTACTGCAGGTTATGTATTTCACT
TGTATGTTCGTCTGTATTTTGTGGGTCAGTCGTTACCATGGAGCGAGAGC
TTCCTAGGCTGACCCAGTGTAATGACTGTTCTTCATTGTCAATAAATACA
AAGGTCCTACCCGTGTTTCGACATCTTAACCGAAGCAAAACATCGCTGGA
GGCCAAAGCGCTGAGAATGTTTCGGGGCTTCCAAGAGTTCGGTGGTGAAC
AGATAGAGAAGCACAGGCTGACCTTTGACCCGAACGACATCCGGGACTTT
ATCGACGCCTTTCTCCTTGAGCAGCAGCGGGCTCAGGACGAACAAGCTCG
GGAAAGCTTCACCGACAAGCAGCTGAAAGAGGTGTGTTCAAACGGGAAAA
AACGATTGAGAAAACCAATGAATTAATTAATAGATGGATGAAGAGATGAA
TGAACACACACACACACACACACACACACACACACACACACACACACACA
CACACACACACACACACACACATACAGATACACAATACAAAGGCACATAC
ACACATAAACAAACAGACACACAGACACGCATACATACAGACACACAGAC
ACACAAACTCACTCAGACACACACACACACACACACATACACACACACAC
ACACACACACACACACACACACACACACACACACACACACACCCATAAAC
ACACACACACACACCGTGACATACAAACTGACATATACACAAACGCTGGC
AGAACAAACCTACCTGACGTAGGTAAAAATCAGTAGAAGAAGCTGAAGAA
CGTTTTTTACCCCATGCATGGCCAGGTGCTGACAGACCTGTTCATGGCGG
GTACGGAGACTTCCGCCAACACCATCCGCTGGGCCCTGCTGTACATGATG
GTCAACCCGGCAATCCAGGAAAAGGCAAGTTTCCTAAAATTAATTAATAA
TTAATAATCAATTTGTGCCCTTGGGAAAGGCACTTAACACGACTTTCCTT
ACTTCATAGGTTCATGAGGAGATCGACTCGGTGCTGGGCCAGAGCGCGCC
CTCCTACGCACGACGGAACCTCCTGCCCTACACAGCAGCGACCCTAGCGG
AAGTCATGCGAATTAAACCCATCGCAGCCCTCAGTGTTCCCCGCGCAGCG
TCAAGGGACACGACCCTCAACGGCTACAACATCCCCCAGAAAATCTACAT
TCTTGTAAGAAAAACAATGTTTATGATTATGATAACTTTTGTTTGCTTCA
TGCCCGTGGCCTAATTGCAAGCGTACAAACAGTAGAAAGGGTAACAATGG
TAACAAGTGTGCATCTAACTAATATTTCTACATACAACATCACTGGGGGG
GGGGGGCTTCTTCTTTGGAGGCAGTGGCTGATGAAAAGTCCCACGTTTTT
AATGATAAGTGGAGTTTGTGATTTTTGTAGAAATGTGGTTTTTTGAAGGT
CTTCTAGGCGGTGAAAGCTCGAAAATATTCGATCGGCCGCAGCGACGCCG
CCAGCGTGCCGCAGGTCCAGTGAGAGGGGGGCTTTTAGAAAACATTCACT
GTGACTCCCTATTGTACCTCCTGTTGATATTATCTACCATTGACATCATA
TAGCCTAGAACCTTCCCGTAGTTTGTAGTAGAGCATTGTATAGCCTAGAG
CCTAATTAGAACATTGTATAGCCTAGAACCTCCCTGTAGCTTGCACTAGA
TATAAATAGCCAGCAGTATTTTAATTCACCAGGTTGTATCATTTCAGCCA
GTAGGTACCCATGTGAGTAATGAGGCTGTTGTAATGCACTCTAGGCACCT
CCTCGAACACGGGACCCCCATTTTCGCTCTTCCGAAAGACGGTGCAGCTC
CGACAAGGATACCCTTCCCGGGATTCGATCCGGGGTCTCCCGGATCCAAC
TAATTGGAAACAGAAGGCTCAACTGCGAAGCCGCTACCAATTAAGCTACA
GGGTTCTTATATTGTACCTGTAACAATCGCTGTGCAATGAACTTTGACTT
GACTTGACCGTGGCATCTGCCCTCTACAGGCTAACCTGTTGTCGGTGCAC
ATGGACGCTCGGCTGTTCCCGGAGCCGAGCAAGTTCCAACCCGAACGTTT
CCTGGATCAGGACGGCAACTACATCCAACACGAGGCCTTCATCCCGTTTG
GCATCGGTAAGGCCAAGGGGTGTCCCTGTGGTGTAGTGGTCTGCGCCTTT
GCTACTCTGCCACATCTGGTTCAAATTACTTGGACCAGAAGGACTGGGGT
TCTAGCCCCAGGTAGGGCACCTCTGGACAAGAGGCGCATTGAGTCATACC
AAAGACTTTATAAAAATGGTACATACTTATGAAACAGTATGGAAGTTAAA
CACACTCCACTGCCAGTGGACTAGCCCCCTGCTGCAGTGACTGCGCCACA
GTGTGGCCCCTATGAAACGGAGATGGGCACCGCCCTATACATCAATTATG
GTGTGGGAGGATTTTAAAAAAAAGGCCATGTTGATTTGGATTACATGGGT
GACAGCAAACGGAATTTAATACGTATACGGCAATTAGCCTGCTATTCAAT
CCTATGATAACTCCCGGTTCTCTTTGGTCAACGTTGCATCGGGGTAGCAG
CCGTTGCCTAAGATTTGTCTTTGGCACAACTAAATGAACCTATATGCAAG
ATATTGACCTTAAATACGCGAACACGATCTTAAACGTGTACGAATCCTTA
CGTTCCGGCGACGTGCTCTTGTCGATCCACCCCAAACTTACATTCCCTTA
TACTCGGGTTAAATTTCCAAGCCGGGGCCCAACTGGACGTATGTACGGTT
TGAGAAAATGCAAAAAAAAAAAAAAAAATGCACATCAAGAACATACATAA
ATTATATTAAGGACTCTAATGAGTAATCTTTTAAAAAGGTTTTGTGTGTT
TTGGTGTCTTTTCATTGTATTTTTTGCTGTTAACCATTCTTGTTATGACC
CTCCGCCCCCTCCCTTTTTCTCCTTTAGGCCACCGAGTATGTCTTGGTGA
ACAGCTGGCCAAGATGGAGCTCTTCATGTTGTTCGTCTCCCTGATGCAGC
GCTTCACATTCCATCTGCCAGAGGGCGCACCTGAGCCTTCCATGTTGGGA
AGCTATGATCACGCTAGTTTTGTCAATCCGCCTTTCCCCTTTGAGTTATG
CGCCCTTCCACGCGAATAGTGCTGTCTAATCTCCAAG Coding sequence (CDS) from alignment at Sc0000003:4712418..4717504+ >Blg00840.0 ID=Blg00840.0|Name=Blg00840.0|organism=Branchiostoma lanceolatum|type=CDS|length=1449bp|location=Sequence derived from alignment at Sc0000003:4712418..4717504+ (Branchiostoma lanceolatum)
ATGAGTATCTTGCAGGAAGTCGTGACGACTGTTCGTCACTATGCCGACCT
CCCGACATGTCTGCTGGCCACATGTGCGTGCCTGCTGACGTATCTGTACC
TCCGGCGGCCCAGGAACCTCCCACCCGGACCCTGGGCCTGGCCGCTTGTT
GGGAACATCCCCATGTTAGCTAAGTCCGCCTTCCTTCCTGCCACTTTTAC
GGAGCTGTCCAAACAGTACGGTGACGTCATGACCCTGTGGAACGGCGGAT
CTCCTTTCATCGTCCTGTCTGGGTACGAGACTATACGGACTGCCCTGGTC
AAGAGAGCTGAAGATTTCTCCAGTCGTGGTTGCAATGCAGGAGTGGCGGA
AGTGCGCAAGGACGGCAAAAGAGATGAAGTTGCAGGTTTCCTGATGGCCC
CCTACGGACCATGCTGGAAACGGCAGCGCAAATTCGCCGTCATGACTCTC
CGGGACTTCGGCGTCGGCAAGCGGAGTTTGGAGGGCAAGGTCATCGAGGA
AGCGAACGCGCTGGTCCAGGAAGTTCTGTCGCAAAACGGAGGACCGTTCG
ATCTAAAGATCTTGATGCAGACCGCTGTCTGTAACATCCTTTGCTCGGTC
GTCTTCGGAGACCGTTTCGAGTACGGGGACCCCGATATGCTGCGCCTGCT
TCGCCTGCTGAACGTCACGATTGAAGCAGGGCCCACCGCCATCGACCGTC
TCACGAAGGTCCTACCCGTGTTTCGACATCTTAACCGAAGCAAAACATCG
CTGGAGGCCAAAGCGCTGAGAATGTTTCGGGGCTTCCAAGAGTTCGGTGG
TGAACAGATAGAGAAGCACAGGCTGACCTTTGACCCGAACGACATCCGGG
ACTTTATCGACGCCTTTCTCCTTGAGCAGCAGCGGGCTCAGGACGAACAA
GCTCGGGAAAGCTTCACCGACAAGCAGCTGAAAGAGGTTCATGAGGAGAT
CGACTCGGTGCTGGGCCAGAGCGCGCCCTCCTACGCACGACGGAACCTCC
TGCCCTACACAGCAGCGACCCTAGCGGAAGTCATGCGAATTAAACCCATC
GCAGCCCTCAGTGTTCCCCGCGCAGCGTCAAGGGACACGACCCTCAACGG
CTACAACATCCCCCAGAAAATCTACATTCTTGCTAACCTGTTGTCGGTGC
ACATGGACGCTCGGCTGTTCCCGGAGCCGAGCAAGTTCCAACCCGAACGT
TTCCTGGATCAGGACGGCAACTACATCCAACACGAGGCCTTCATCCCGTT
TGGCATCGGCCACCGAGTATGTCTTGGTGAACAGCTGGCCAAGATGGAGC
TCTTCATGTTGTTCGTCTCCCTGATGCAGCGCTTCACATTCCATCTGCCA
GAGGGCGCACCTGAGCCTTCCATGTTGGGAAGCTATGATCACGCTAGTTT
TGTCAATCCGCCTTTCCCCTTTGAGTTATGCGCCCTTCCACGCGAATAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00840.0-exon-Sc0000003-1570713199:4712418..4712591 | Blg00840.0-exon-Sc0000003-1570713199:4712418..4712591 | Branchiostoma lanceolatum | exon |
| Blg00840.0-exon-Sc0000003-1570713199:4712907..4713111 | Blg00840.0-exon-Sc0000003-1570713199:4712907..4713111 | Branchiostoma lanceolatum | exon |
| Blg00840.0-exon-Sc0000003-1570713199:4713782..4714110 | Blg00840.0-exon-Sc0000003-1570713199:4713782..4714110 | Branchiostoma lanceolatum | exon |
| Blg00840.0-exon-Sc0000003-1570713199:4714471..4714698 | Blg00840.0-exon-Sc0000003-1570713199:4714471..4714698 | Branchiostoma lanceolatum | exon |
| Blg00840.0-exon-Sc0000003-1570713199:4715327..4715521 | Blg00840.0-exon-Sc0000003-1570713199:4715327..4715521 | Branchiostoma lanceolatum | exon |
| Blg00840.0-exon-Sc0000003-1570713199:4716347..4716473 | Blg00840.0-exon-Sc0000003-1570713199:4716347..4716473 | Branchiostoma lanceolatum | exon |
| Blg00840.0-exon-Sc0000003-1570713199:4717296..4717504 | Blg00840.0-exon-Sc0000003-1570713199:4717296..4717504 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:4712418..4717504 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00840 |
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