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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:3520958..3529060- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00871.0 ID=Blg00871.0|Name=Blg00871.0|organism=Branchiostoma lanceolatum|type=mRNA|length=8103bp|location=Sequence derived from alignment at Sc0000003:3520958..3529060- (Branchiostoma lanceolatum)
ATGGTTCGAATTTTTGAACCCATCAATCCATGGCTGATAACTCTGGTACT
TAAAAGCATGACTATTTCTGGTCCTCTTCTGAGCTGGCATTAGATACTTA
TCAGTCGGTACGTCCACAAGTTTATTAGTCATCTTGTACATCATGCATAG
TCTGGTGTGGGCTAGCTTAATAGCTTGTGCATCAGGCGACTGAAGTTTAG
ATACGGGATTTTAGGGATGTCTTAATTTAAGTTACACCTCATTGAATGAA
CCCCAAAGTATTTGATTTGCCATCTATCTCGCAATTCATTAATATCTAAG
TGGATATGTGTGATATTAGTGAGTAATCTTAGAATATTCGTTTGAAATTA
AAGCAATTCTTACTGTAACTCCCAAATTCTATGTGATGTATTAAAAAGTG
ATTATGGCGTATTTACTAGTATTGTCCGACAAGCTAGACGGTTTAACCCG
TAAGTTCAGGTTAAGTTTGACCTTGAGTATCTGCATGTAAGTGCAACTGT
AATTGTCAGCCCATAGGTTAGCTAATTATCGATGTAACTTTTTAAAGACT
ACTTCAAGACATCCTAAATTGTCTTTACCTCATTAACATATCTATTCAGA
GTTTTGGTATAAACCTGGTGTTCTCAGTCCTATCGTTAGTCACTGACGAA
AGACAGTGGATACTGTCTGAAACGTCTGACTGTTTCAAAATCTTATCCAG
TTGCTTGAGTAATTATTTTTGGCGTATCTTATTACCTGGATGTCTAACCT
TCATCAACGTATCGATGTAACTGTTTAGCTGATTAATGAATGGCTTAATT
GACTTGTTAACTTTACAGACACTCGGCAAGATGAACAACATCAGCACGAC
CGACCCGGAGCTCAAGTACAAGCGGATGGGGTTCGAACCGACCCCGGAGC
TGCGGGCAGAGTGGAAGAGGCGGTTCGGCAAAGAGGTACGTCATAAACAC
GTCATAAATACGTCATAAATACGTCATAAATACGTCATAAATACGTCATA
AAACAAACATAATGTAATTTGATTATTTGTTTATTGGAATTCTTCACAAC
GCGAAAGGGATGGCAAAACAGGTGCATGGACACATGATAAAAACAAAATT
TATAAATGCATACGAAATTTATATGTCTAGCGTGGAGGAAATGTCCCTGA
CTCGCATAAAATACACAAAAGAACGTTTACTGCTCAATTTAAAGGCACCA
TGGATTCTACATATATACGTTTTAAATCTGAAATATAAGTTCCGTCTAAG
ACACATGATGAAAACAAAATGTATTAAATGCATAAGAAATGAATAATTTT
CCAGCAGCATGGAGGGAATGTCCATGACTGCCATACACAAAAGAAATTGT
GCTGTTTTGAAATGCACCATGGATTTTATAGTTTTTCTTAATCTGAAACA
TACGTTTCGTCATTGTGTTCATCCAACCATTGCAAAGTTCTGTTGTGGCG
AGAGTGTGCATAGCAGCTGTAATATCAAATATTCCACATTATACATACTA
ACGTACTACATGTATATTGCAATACCAAGGAATAGTAGTTTTTTTTTTAA
ATCTGTCAAAATGATGTCTGTAAAGTACATGGTTTTTGATATCTTTAAAC
TAATATGTACAATTGTAAGGTCGACGTTCATCAACGTGGTGTAGATGGTT
AGATTGGTAATAAGCAGTCATTTTGACTTTAATAACTTTTTTTCAAGCAG
TCATCAAATGCTTATACACTAAAAAAATCACTTTGTAAAGTATATGGACA
AAGCCAAAATGTTATACTGTATATGAATACTTTGGGAACGCATCTATAAG
CAGCGACACCTGTGCTGCATTGCTATGTGAACCAGTCAGAATTCTCTTGA
AGAAGGTGAAAGATGGTCACCGAAACGTCGGTTGAATAAATATCTTGGTT
GTGTAAAGAAGAGTATTTTTATTAATCAATCATCAATCAAACTTTATTGC
ACAACAAATGTAACAGGTACCATGTATGGATTAATGATCTGTCTTGTTCA
GGAGCCCCACATAGCCACGCTGATTCTCGCGAGAGGTGGGAGTAAGGGCA
TCCCGATGAAGAACAACAAGAAGCTGGGCGGCCTGGAGCTGATAGGCTGG
GTGATCCGGGCGGCCAGGGACTCGGACATCATGGACAGGTTGGGCTATGT
TGTTTGTTCGTTCGTATTGCATTCCCGGTAGGTCTTTTTCAACTGTTTAG
GTGGGATTTTACTAGCTTAGATGTCCAGTTTGGTTGGAGCAATTGTAAGT
AATAAGCTGTGTAATTGTTTAATATTATTGTTACCCACTGTAAAAAAAAT
GCGCATGTAAGTTTGTGGTTTGAATAGATAAATGAAAATATTCGGTAAAC
CGCCTCATGGCGTAATACAGTAGGTTTGTGCTGAAGAGTACAGACTGCAT
ATCCGGACAGATCTATCTGATCCACTCACACCGGGAATCAACCCTGCTCT
TTTCGATAAGAGTGAGGACATCATGGACAGGTTGGGCTGCTTATTCTTCG
TGATTGTTATATCATTTATTTATTCAGATTTACCACATTTGTGGAAGGAT
TGACATAACAGGTGAACTATCACCTTTTCAAGATGTCAACCCAGACTAGA
CTGTAAGGTTTGGACCATCGCACACCGGGGCATGCCCCTACTCTTTTTTG
AAAGGTGTGGTGGGTTCTTTAACGTGCGCGGGGTGTGGCTCTCCCCAAAC
ACGGGACCTCCATTTAACGTCCTATCCGAGGGACGTTCCTAACCGAAGCT
AGGTACTTATTTACACCTGAGTGATCAGGGGGCCATGGACTCGGACATCA
TGGACAGGTTGGGCTTCTTATTCTTCGTGCTTGTTATTTCATTTATTCAT
GTATTCAGATTTACCACATTTGTGGAGGGATTGACAGGTGACTAGCACCT
TTTTAAGATGTCAGTTATGCTTTACCTCAATGGAAGATGACTGCTTTACC
TTCATACCACCAGTATCTGGGTGTCCACCGACCATGACGACATCGCTCTG
AGTTGTAAACTTTAACCTTACACCAAATGCATAACGATTCCAAATGTGCA
CTAAGAAATTGCTTATAGCTAACAAGTAAAGAGCTACAAAGTAACGCCAT
TTTCTTTTGGTTCAACTTCATACCACCAGTATCTGGGTGTCCACGGACCA
TGACGACATCGCGGCCACAGCGCGCAGGTGCGGGGCGCAGGTGCACAGGA
GGTCATCTGAGGTGTCACAGGACACCTGCAACTCCTGGGTCACTATAGAC
GAGTTCGCCAGGTACCATCCTGAGGTGGACATCATCGTAGACATACAGGT
GAGACAATATTGTCTTCTTCATATTGTGAATTTGATACAAAAGAATGTCT
AACCAAGTGTCCTTCACGATCTAGTCTTTCCATCTCTTGGGTGGTCTTCC
CCGGGGTCTGGGGGTAGCGAACTCCTGGCTGTAGGCTTTGTAGACTAATG
TTTGTGGGGGTCTTCTTATGACGTGTCCAAACCACCTCAGCCTTCTTGTC
TGTACCATTTCGACGATGGTCTTTTTAGCCCCGAGTTTGGCTCTGATTTC
GACATTTCGTATGCGATCACGGAGCGTGATGCGGAGAATTGCCCGTAGGC
ATCTCATTTCGAAGGCTAATAGGAGAAGTTCATTAGGAGAAGCTTTTTAT
GGTCCAGTTTTTACAAGCATACGTGGCTATAGGGAGTATAAGTGCCCGAA
CATGCAACAACATACTCGGTAACTTTAACTTTATATCATATTCATTTTTG
ACAATATCAATGGACAAGAAACTCAGCAAAAAGAAGTCGAATCCTCTAAC
ATCCGATGACGCCATATTGAATATTCACAGGCAACGTCCCCGTGTCTCCA
TCCGTTCCATTTGCATGATGGGATGCGTCTGACCCTGAAGGACGGGTACG
ATTCGGTCTTCACTGTCGTCAGGCGTCACGGCTTCCGGTGGACGGAGCCC
AAGTGGGGTATGTATCATGTATTTAATCTATTTATTTATTTATTTATCTA
TTTATCTATTTATTGGTTCAGCATGTACATACCAGGGTTGCCCAACTAGT
CGGAGGCTATTACTAAGGGCTATTACTAAGAGCTAACCCAGGCTATTACT
AAGGGCTAACCCATGTGTGGTCATAGGACTGTAGGTTTTGGACCATCGCA
CACCGGGGCATGCCCCTACTCTTTTTGGAAAGGTGTGGTGGGTTCTTTAA
CGTGCGCGGGATGTAGCTCTCCCCAAACACGGGACCTCCATTTAACGTCC
TATCCAAAGGACGTCCCTAGCCCTAGATGAGCTAAGTACTCATTTACACC
TGAGTGAAGCGATACAATTCAACGCACTGAATTTCCCACTTTCACTCACG
ACATATCAACTGTATGAAGTTATGAATCATGAACACTTTCTATAGTTTAT
ACTCAAAATGACTTGCGAATAATCACTGTTTACAGGTCACCACTATAAAC
AGGATTTATAATTGGGAAATAATTTTAGGGGCCACCAAGAAGTAGCCACA
GTGGCCATATGGCCATACAGAGGTGGCCACGGTATACGGTTTGAATGTAC
ATGTACACTTATAATTCTCAATGAAAACTTTATGCAAACTGTACACAAGC
TGCAATTTCAAGAAGATATGTTAATGTCGTCCCATTCCCAGGTATCCAGC
CTTTCCCTCTGAACTTTGACCCGGCTAAGCGACCTAGGCGTCAGGAGTGG
GACGGAGAGATAGTAGAGAACGGCGCGTTCTACATGATGACTAGAGATGT
AGAACAACAAGGCCTTATGCAGGTAACAACACTTTGTGTATTGTTTTCAT
GCACCATTTCTGTTACAACCACTACCACCAGCGATGTTACAGGGGTACAA
ACCTCCCTCCTTGAGCGTTATTTCCCACGAGGGGCTTTGCTCGGTTCTCT
CTATATTATGTAGATGTAGATGTATATGTAGATGAAGACATAAATGGGAG
AGATAGTAGAGAACGGCGCGTTCTACATGATGACTCATGCAGGTAACCAC
ATGATACAAACCACATAATACATACGCCAAAAATAATTACTCAAGCAACT
GGATAAAATTTTGAAACAGTCAGACGTTTCAGACAGCATCCACTGTCTTT
CGTCAGTGACTAACGATAGGACTGAGAACACCAGGTTTTATACCAAAACT
CTGAATAGGTATGTTAATGAGGTTAAGACAATTTAGGATGTCTTGAAGTA
GTCTTTAAAAGAAGATTAATTCACATAATACATACATTTAACTATATATA
GGGCTCCATCCTTGGGGCGTCGCCAAAAAACTGATATTGAATGATAGAAG
ATAGTAAAGAATGGTTAAATGTACGACGAAATTTGCCCTAAATATTTTCG
TAGTGAAGTTTTAGGATGAAATGTGAAGATACCGCAATCATTTATTTAAA
ATCACTGAATACTTTGACATATTTATCATCAGTTTCTTGCTGTCATTTTT
CAGGGTGGAAAGATGGCGTATCTTGTGATGGAACCTGAGTACGGTGTGGA
CATCGACACTGATCTGGACTGGGAGATCGCCGAGCAGCGTCTCTTCCGGT
TCGGGTACCATGGACGAAAACCTAAGGTACAACCTTACAGATCCCATACT
AAAAGATCGAATAGGTTATTGTTGTCGTTCAAAGTGTGGATGCCTTCAGA
AGCTTCCCACAGTACAAGTGGAGCTTCTAAAAACAACTGTACTTCTTTCA
CTTGTTCAATAACATGTGGGTTCCTTGATTTTGATAGTAGAATTGTTCTA
TAGATATCTTCGTCGGTAAAGGTTTAGGAGCAAAAATACATTTTTGACGC
TTCTGTAAATATTTGATATTCATTAGATGACCAACCAAAAACCTGACCCG
TTGAACCTGCTAAGGAAATTACCATAACTCGCTTTCTCCCTCCCTTTCCA
CCAGACTGTGCGGCTGGTGGTGGTGAACATTGACGGGACGCTTCTGGACG
GCCAGGTTCAAGTTTCCCCGACGGGAGAGGAGCTCAGGTCGTTCAAGACC
ACGGACATCGTCGGTGTGCAGCAGCTGCAGGAGAACGGGATAGAGGTAAG
AGAGTACCATGTTTATTATACTTAGTCTATTTTATTTCAGTTATGTTTTT
ATACATTTGAGGCTGGACCAAGACGCCGCGTGCCTGCAAAGCTAATGTGT
TACGCGCGTTGGACGGTGGTTAGCCGAACCAGGAATATGATACCCCAGTC
ATGTACATGAACGGATAATAGTTAAGAAATCTAAGAGTTCATTATCTGTA
GAAGTCTTCTTTAAAAGACGAAAAGAAAACATTTCTTTGCATAAGGCCAT
GTTCAATTAACTTCCCGATCCTTACTTGCAGTTCCGTGTAGTCGCCGAGA
GCGATAACGACGTGCAGCGGGCACTGGCCGAAAAGCTCTCCGCCAAACTG
GAGGAGAACTGTACGGTACGTCTTCTTCTTCTTTTCCTTATATATATATT
CATGTGTGTTACTATGATGTATTCAGTGGTCTATGGTCCGAACCATTGGT
CTTACAAAATGTAATCAAACGTGTTCTAAATTAATTTTGCAATCGTAAAA
CTATGCATGAAGATATTTTGGAAAACATAAACCAATAAAATTGATTATGA
TAAGCCGGAGCACGACTTCAAGTGCGCAATAGCAGCGTGATGTATTGTGG
GCAATATGTTAAATTTGAAGGCCCCTAAGACCTATGAGGTTTCATCAAAA
CCTTCTTGCTAAGACATAAACAAAACACGTCTGGACATGTATCTAGTATG
GATTAGACAAGAACTGTTGGTTAGGGGCCTTCAACTTTGAACTCGCGCAT
GCGCAGTTCCTTTGACATAACCAGCAGACATTCTGCAGACTAACGATGAG
CCGTTGCCATGGTTACAGGACAAGCTGGCGGTGATTGACGCCTGGCGCCA
GGAGCTCGGTCTGGAGTGGAAGGACGTCGGATATATGGGTAATATAGCAG
CGGAGCGTTTTTCTGTCTTAGAATCGTGTCATCCTCTCTTCCTAATTCTC
TCTCTCCTCTTTCCTCTCTTTCTTTGTCATTCTCTCTCTCTCTTGATGTT
CTTATCTCGGAATGGTTTCATACGGGTTTTGGTGATACCTTTCAATATTA
ATCTCAACGGTTTTGAAAGAGACTCTATCAAAGCCGGTTTTAGATATGCT
ACTATTTGACAGTCGTATACAACATATGCGTTTTTGGGCAGGGAAAATTG
TAGGAACGTAATTCTAAAAGCCTGTAGGGGAGCATGAGAAGTCATTTTAA
TCATCTAAGTTATACCAGCTTGTCAGATTTCACATCACATATTTGATCTA
AACATAACAGTGGTACCTTTTGTTAGAGTGTTGGGTAAGCAGGCGGAAGA
AGAGTAAAATAGTAAAGACCCGAAGCAATATTTCCCTCTAGACTATGCAG
AGTAGTTTTACTAGTTTTTCACTGTGTTCTACACAGTTTGGACACCCTAC
AGCTGCAATCAGTCCCTCTTCAACTCTCTCCACTTTGCATTGGGACAGAA
ATATAATGAATATTCCTCCTATCCGTAGGCTATGACATCAGCGACATGAA
CTGTATAAAGAAGGCGGGGATGTCCGCCTGTCCGTCTGACGCCTACGCCG
CCATCCAGAAACACTCTCACTTCATATCAACCTACAGGGGCGGCCAGGGC
GCACTCAGGGAGTTCTGCGAACAGGTAAGATTCTGTTTTTGACTGAAATT
GGAGGTAGATAATTATAGGGAAAGTATCAGCGTCTAGGAGATTCAGAGGT
TTGAGTGAAAAATATTACTTTAGTTAGTAATACACAATTTAGCTATTTAC
AGGTAATGAATGGGAAAAAACACTTGGGAGAAACATAAAGCATCGCCTTA
CCATTTTTTTCCAGATTTTACGATACATGTAGTTAAAAAGTGACATATTT
TATATATATTTTTACTGTGTAAATATCCTTCCTAGTGTGCAATGTATTTT
GCTTATAGCAGGGCAAATCTTTAAGTTATATTTTGATTTTGCTGACAAGG
TAGTGGGATCCTCCTTAAACATTTTGACATTTATTGTGACCAATGTCGCG
ATATTTCATTATGGGTTCTATCCAAGGTTATGAACAAGCTGTTCATTGGA
TGA Coding sequence (CDS) from alignment at Sc0000003:3520958..3529060- >Blg00871.0 ID=Blg00871.0|Name=Blg00871.0|organism=Branchiostoma lanceolatum|type=CDS|length=1275bp|location=Sequence derived from alignment at Sc0000003:3520958..3529060- (Branchiostoma lanceolatum)
ATGACACTCGGCAAGATGAACAACATCAGCACGACCGACCCGGAGCTCAA
GTACAAGCGGATGGGGTTCGAACCGACCCCGGAGCTGCGGGCAGAGTGGA
AGAGGCGGTTCGGCAAAGAGGAGCCCCACATAGCCACGCTGATTCTCGCG
AGAGGTGGGAGTAAGGGCATCCCGATGAAGAACAACAAGAAGCTGGGCGG
CCTGGAGCTGATAGGCTGGGTGATCCGGGCGGCCAGGGACTCGGACATCA
TGGACAGTATCTGGGTGTCCACGGACCATGACGACATCGCGGCCACAGCG
CGCAGGTGCGGGGCGCAGGTGCACAGGAGGTCATCTGAGGTGTCACAGGA
CACCTGCAACTCCTGGGTCACTATAGACGAGTTCGCCAGGTACCATCCTG
AGGTGGACATCATCGTAGACATACAGGCAACGTCCCCGTGTCTCCATCCG
TTCCATTTGCATGATGGGATGCGTCTGACCCTGAAGGACGGGTACGATTC
GGTCTTCACTGTCGTCAGGCGTCACGGCTTCCGGTGGACGGAGCCCAAGT
GGGGTATCCAGCCTTTCCCTCTGAACTTTGACCCGGCTAAGCGACCTAGG
CGTCAGGAGTGGGACGGAGAGATAGTAGAGAACGGCGCGTTCTACATGAT
GACTAGAGATGTAGAACAACAAGGCCTTATGCAGGGTGGAAAGATGGCGT
ATCTTGTGATGGAACCTGAGTACGGTGTGGACATCGACACTGATCTGGAC
TGGGAGATCGCCGAGCAGCGTCTCTTCCGGTTCGGGTACCATGGACGAAA
ACCTAAGACTGTGCGGCTGGTGGTGGTGAACATTGACGGGACGCTTCTGG
ACGGCCAGGTTCAAGTTTCCCCGACGGGAGAGGAGCTCAGGTCGTTCAAG
ACCACGGACATCGTCGGTGTGCAGCAGCTGCAGGAGAACGGGATAGAGTT
CCGTGTAGTCGCCGAGAGCGATAACGACGTGCAGCGGGCACTGGCCGAAA
AGCTCTCCGCCAAACTGGAGGAGAACTGTACGGACAAGCTGGCGGTGATT
GACGCCTGGCGCCAGGAGCTCGGTCTGGAGTGGAAGGACGTCGGATATAT
GGGCTATGACATCAGCGACATGAACTGTATAAAGAAGGCGGGGATGTCCG
CCTGTCCGTCTGACGCCTACGCCGCCATCCAGAAACACTCTCACTTCATA
TCAACCTACAGGGGCGGCCAGGGCGCACTCAGGGAGTTCTGCGAACAGGT
TATGAACAAGCTGTTCATTGGATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00871.0-exon-Sc0000003-1570713199:3529058..3529060 | Blg00871.0-exon-Sc0000003-1570713199:3529058..3529060 | Branchiostoma lanceolatum | exon |
| Blg00871.0-exon-Sc0000003-1570713199:3528126..3528242 | Blg00871.0-exon-Sc0000003-1570713199:3528126..3528242 | Branchiostoma lanceolatum | exon |
| Blg00871.0-exon-Sc0000003-1570713199:3526923..3527059 | Blg00871.0-exon-Sc0000003-1570713199:3526923..3527059 | Branchiostoma lanceolatum | exon |
| Blg00871.0-exon-Sc0000003-1570713199:3525763..3525931 | Blg00871.0-exon-Sc0000003-1570713199:3525763..3525931 | Branchiostoma lanceolatum | exon |
| Blg00871.0-exon-Sc0000003-1570713199:3525104..3525230 | Blg00871.0-exon-Sc0000003-1570713199:3525104..3525230 | Branchiostoma lanceolatum | exon |
| Blg00871.0-exon-Sc0000003-1570713199:3524289..3524419 | Blg00871.0-exon-Sc0000003-1570713199:3524289..3524419 | Branchiostoma lanceolatum | exon |
| Blg00871.0-exon-Sc0000003-1570713199:3523485..3523607 | Blg00871.0-exon-Sc0000003-1570713199:3523485..3523607 | Branchiostoma lanceolatum | exon |
| Blg00871.0-exon-Sc0000003-1570713199:3523016..3523156 | Blg00871.0-exon-Sc0000003-1570713199:3523016..3523156 | Branchiostoma lanceolatum | exon |
| Blg00871.0-exon-Sc0000003-1570713199:3522646..3522729 | Blg00871.0-exon-Sc0000003-1570713199:3522646..3522729 | Branchiostoma lanceolatum | exon |
| Blg00871.0-exon-Sc0000003-1570713199:3522123..3522192 | Blg00871.0-exon-Sc0000003-1570713199:3522123..3522192 | Branchiostoma lanceolatum | exon |
| Blg00871.0-exon-Sc0000003-1570713199:3521387..3521532 | Blg00871.0-exon-Sc0000003-1570713199:3521387..3521532 | Branchiostoma lanceolatum | exon |
| Blg00871.0-exon-Sc0000003-1570713199:3520958..3520984 | Blg00871.0-exon-Sc0000003-1570713199:3520958..3520984 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:3520958..3529060 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00871 |
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