Blg00903.0 (mRNA) - B. lanceolatum

Overview
NameBlg00903.0
Unique NameBlg00903.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:3579315..3583785-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00903.0 ID=Blg00903.0|Name=Blg00903.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4471bp|location=Sequence derived from alignment at Sc0000003:3579315..3583785- (Branchiostoma lanceolatum)
ATGAAAATATCTCGTCTAGCTGAACTTTTCTCGGCCCTTTTGGCGCTCAG TATTGCATCAGCCTCGCCCGTGGATGGAAGAAGCAAACTTCTGCTTGTCA TCCTGGATGGGTTCCGCTGGGATATGGACAAACTAGAGAACTTACCAAAC CTGGCAGCCTTCTCAGCCGAAGGTGTGAAAGTGCCGTACGTCACTCCAGC ATACACCACCTTAACGGTTCCAAACATCTTTAGCATCTTTACGGGTAAGT TACTAATTTAAAACCTTGACGGTCCAAATACCGTTTTTAAACGGGTAAGT TATTGATTCATTCACTACCTTGACGGTTTGAAGTATCTCCGCCACAAACT ACTAGAAACTACAACATTTGATCCACCGCTCACTGAGCTCAAGTGTCTGC ATATCTGCTTAAAGTGACGTCGTAGAAGTATTGGATTCATTCCTTGAAAA ATTCCAAAAATTTGAGTTCAAAGGTCTGTCTTCGTTATGAATTCTATCAA CACAGATGGACTTTTAAAACTAAGGTAACTATGACTTTTAGCTCTATACT AGAGGAGTCAAAGATGCTACGATATATTATAAGATTGTTTAATCGGAAGG TCTAGTGTTGTCTTAATGTCAGAACGCTAGTCGTAGGTAAAAGAAAGCCG TATATATAATTATATACTATGAAAAGTGCGTCCAGAAGAGAATCATGATT TTAAAATCATCAACATTTGTACAATTTCTTATAGAAACTTTCACTGACAG AAAATATCTAAGGATTATGTAACGTTCCGAGGTACCTAAACTAACGAAGA TTTTAATTTTCTGCCTAGGATGTTATCCAGAAACACATGGCGTTCTGCAC AACATTGCCTTCGACAAATCCACCGGACACCTTGGCTCTCCGGAAGATGT GAAGAACATGACCGAGTATCTTAATCCTGGCATCGAAACTATTGGGATGA CGGCCAGCCAACAGAGTAAGCGTGTGGGAACATACAATTTAATTCCCATC CCGGGAGCATTGCCGGATATCTACGCGTACGAGCCCTATGCTACCAAAAA CGAAACCTACAGTACGCTTCTGGCTGGAGTAGATAAGGTCCTGGATTGGT TTTCGAAGTCAAATGTCGACTTTTCTGCTTTTTACGCCGGCATGCTGGAT ACGGCTTGCCACATATACGGGCCGGAGTCACCGGAGGCCCGTACAGCCTT GCAGCTAGACGGTGTCATTGGCTACCTTCTCCAACAGGTCAGTATAAGTA GAGTGGATTCATACAAAAGCTAACTGACATAAATCTATTCATTTGATATA GATTTCTTTATTTATCACTCATTTGTTCCCCAAATATACATAAGCAGGGA GAGCACAACTGCATCTCCCCTGAATCGAGTACAATTAGTTGCATTGTTCA TTTTCAATGAACAATGCTCAAAGACAAAAACAAAGTTACTAAAATATTCA CAATGTAACTTCACAAATACAAAGTTATCAAAATATTCACAAAGTTACTT CAAGTCAAGTTATGCAAGACATCTTTTGAACCACAGACATCTTTAAATAA AGATGGTCCTGACGACGTCATCTATGGTTTGTGAAGCCGAACAAATGCCA GAGCCAGAAAGCAGCCATGTGAAGAGACAACTCCTCGAAAAAGATGGTCG TTTTGTATCCCTCGAATGGGTCAAAAACAGCTTTATGACATATGTAACTG TTCCATTAGCATAGTTGAAGTCATGTTGTAGGTCAACTAAGGTCAGGATC TGTACCATGCAGGATAGTCAGCACTGGAAAGGTTTATAAATGCAAGTTTC ACGTATTTGTATTTTTAAGCCTTTTATCCACTGTTAACTGGCAAAACATT TCTGCAGGACAGGCTGAATAAAGGTTCTAAACGGGATCCCGGGAACTATG CGGCTCCACATGTCTTACTGAGGAAATGATGGCGGTGCAAAAGATGTCTG TTAGCTGACGAATGAATCCATTCTATCATACATACTCCAACATGTACAGG TCAAACAGCGAGGGATGAAGGACCTCAACATCATCCTCGTTGCTGATCAC GGAATGCGGCAAGTCCAGAACGTCTCCAACCCGATCGAGATCTTGCGCTA CGTGAATGCTTCGTCTCTGCAAATGCTGATCGCGGACTACGGACCACTGG CCCTCATCCAGCCCGCCCCGGGCCGAAGGGAGGAGGTACAGGACATTTTT TTTTACTTCCTTTTATTTGACAGACAAGGACGACGTGGCACTGTTGCACA AGTTTTTTACAACATATTTTAACAGTGTTGCATACAGAGGACGAAAATAC CCATTTTTACACCTAGGTGGATTGAGGAAAGTCGTGTAAAGTGCATTTCC CAAAGGCACAACATCGGTGGCGTCAGGGTGATTCGAACCCGGGCCCGCTT TTTCCGGGGCCGAACACTCTACCGTTACGCCACACGATCCCAGTACAGGA CAAACATCACTAATATACGTATGCGCCTTGGTTTCTTGCCCATGTACGAC TTGTAGAAGGCTTTTTCGTTTTCAAAAATGTAAGTGAAATCGTGTGAGAA AAGATAGATTTTGGCCAATTTTCTAGTTTCGTGGGCCCCCTAGTTTGAAA TGGTCAGTTTCTACCCTTGTGTCGCAGATTCTAAATGACGCCATCATACG AAACTTGGGCTCTCTTTTCCGCCGTATAGAAAGTTTTTAAATTTGAACTT TTTGAGTACTTGACATACCGGGCTACAATCTGGGGTGAGCTCGACTTACA TGTATGACCTGGAATATTCACGGATAAAATCATGACGTCGATTACACCCT GAATTTGCCAACGAGTATTTCTACATTAGGCTATGTTGATTTGATTATAT GAATTGCATCCGCGCGCGCACCAATTTCCGTCTGTTTAAAAAAAAGTTTT CAGCCATACTGAAAATCGTAAAACCAGCCAGCATCAACATGATTCGCTGT AAGCTGAAAAAAATATATATATATTTCGGAAAATGCATACTAATGTCGTA GAGTGCCAAAGTCAATTCCAAAGGCAATGAAGAGGTTTCAAAAGAACAAA ATTGAAGAGCCTATATTTCGGTATACCATACTGTAGGTGTAACTTTTGTT CATCCTTCCTGATTTCATGATTAAGGCAAAGTTGTTGTTGGGTTTATTTT GGCTTTTTTGACAAAATATTTTTTAGTCACACGGTTGTATCAGTTGTTTG TTTGTGTTTTTTTTTGTTCCCAGAGGATGTCATCCATATAATCAAATCAA CATGGCCTTATCTTCACCCCGACCAATCGAATCACGTGAATCGCATTGAA ACTCAGATTCGTATCAGCCATTTCCCGACAAATCGCTTTCTAACTTGCGT TAACGACTACATCTGACCAAACAAACTCGCCAGTGAGATGGTGGAAGGTG TCAGCTGCCTAAAGACGTTTTCAGATTGACAATTTTGGCACTCTGGAAGT AATTGAATCCGCCCGCGATTTAACGTTAAGAGAAAAGTAGTAGAAACTAG AAGTTAAATCGCGGGCGGATTCAATCACTTCTCAAATGTCAAAATTGTCA ATCTGAAAACGTCCTTTGGAAGCTGACACCTTCCACCATCTCACTAGCGA GTTTGTTTGGTCAGATGTAGTCGTTAACGCAAGTTAGAAAGCGATTTGTC GGGAAATGGCTGATACGAATCTGAGTTTCGATGCGATTCACGTGATACGA TTGGTCGGGGTGATCTTGACCGTCTTTTGGCCAGGTGTACGCCGCCCTGT TCGGCAGCCACCGCAACCTGACGGTTTACTACAAGGAGGACTTCCCGACC AGATTCCACTACGCCAACAGTCCCCGCATGACAGACATCCTGGCCATGGC GGACCCTGGATATGTCATCTATTCGGTAAGTTTCTCATTTAGTGTCTAGC CTGATAAAACAAACAAATTTACTATTAATTCTGCATCAAATGTCCAGGTT ATGTCTGTGTAATATTCATGACTCCATTTTTTTTTACCTAAAATTGGTAA CTGTGGCTACAATTCAAGTATGCAGTAACAATCACACTGTTCCATTGGCA TTTATTCCTGTCAATAGTGAAAGAAAAAGTCTTATTGACAGGAACATCCT GTCAGTAGCCTTGGTCTTGTCTTACTAATGGCATATAATGTTCCTTTTGA TCACATGTACAGCGCTATCCATCACCATATTACGCACTTCAAGGAGATCA CGGTTACGACAACCAGGACCTGTACATGAAGGCGCTGTTCCGGGCGTGGG GGCCGAACTTCCGGCGGGGCTACGTGCGGTCCGACCCGTTCGACTCCGTC CACATCTACCCCCTCATGTGCGAGATCCTCGGAATTGAACCTAACCCGAA TAACGGGTCCCTGGCGGAAGTCAAAGATATGCTAGTAGGAGTGTCTCCGA GCCAAGGTTTCCAACACGTGGCGAAGGGTCAGCTGTTACTGATTGTCATG GTCGTTTTGACAGTGATGTAA

Coding sequence (CDS) from alignment at Sc0000003:3579315..3583785-

>Blg00903.0 ID=Blg00903.0|Name=Blg00903.0|organism=Branchiostoma lanceolatum|type=CDS|length=1299bp|location=Sequence derived from alignment at Sc0000003:3579315..3583785- (Branchiostoma lanceolatum)
ATGAAAATATCTCGTCTAGCTGAACTTTTCTCGGCCCTTTTGGCGCTCAG
TATTGCATCAGCCTCGCCCGTGGATGGAAGAAGCAAACTTCTGCTTGTCA
TCCTGGATGGGTTCCGCTGGGATATGGACAAACTAGAGAACTTACCAAAC
CTGGCAGCCTTCTCAGCCGAAGGTGTGAAAGTGCCGTACGTCACTCCAGC
ATACACCACCTTAACGGTTCCAAACATCTTTAGCATCTTTACGGGATGTT
ATCCAGAAACACATGGCGTTCTGCACAACATTGCCTTCGACAAATCCACC
GGACACCTTGGCTCTCCGGAAGATGTGAAGAACATGACCGAGTATCTTAA
TCCTGGCATCGAAACTATTGGGATGACGGCCAGCCAACAGAGTAAGCGTG
TGGGAACATACAATTTAATTCCCATCCCGGGAGCATTGCCGGATATCTAC
GCGTACGAGCCCTATGCTACCAAAAACGAAACCTACAGTACGCTTCTGGC
TGGAGTAGATAAGGTCCTGGATTGGTTTTCGAAGTCAAATGTCGACTTTT
CTGCTTTTTACGCCGGCATGCTGGATACGGCTTGCCACATATACGGGCCG
GAGTCACCGGAGGCCCGTACAGCCTTGCAGCTAGACGGTGTCATTGGCTA
CCTTCTCCAACAGGTCAAACAGCGAGGGATGAAGGACCTCAACATCATCC
TCGTTGCTGATCACGGAATGCGGCAAGTCCAGAACGTCTCCAACCCGATC
GAGATCTTGCGCTACGTGAATGCTTCGTCTCTGCAAATGCTGATCGCGGA
CTACGGACCACTGGCCCTCATCCAGCCCGCCCCGGGCCGAAGGGAGGAGG
TGTACGCCGCCCTGTTCGGCAGCCACCGCAACCTGACGGTTTACTACAAG
GAGGACTTCCCGACCAGATTCCACTACGCCAACAGTCCCCGCATGACAGA
CATCCTGGCCATGGCGGACCCTGGATATGTCATCTATTCGCGCTATCCAT
CACCATATTACGCACTTCAAGGAGATCACGGTTACGACAACCAGGACCTG
TACATGAAGGCGCTGTTCCGGGCGTGGGGGCCGAACTTCCGGCGGGGCTA
CGTGCGGTCCGACCCGTTCGACTCCGTCCACATCTACCCCCTCATGTGCG
AGATCCTCGGAATTGAACCTAACCCGAATAACGGGTCCCTGGCGGAAGTC
AAAGATATGCTAGTAGGAGTGTCTCCGAGCCAAGGTTTCCAACACGTGGC
GAAGGGTCAGCTGTTACTGATTGTCATGGTCGTTTTGACAGTGATGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00903.0Blg00903.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00903.0-exon-Sc0000003-1570713199:3583542..3583785Blg00903.0-exon-Sc0000003-1570713199:3583542..3583785Branchiostoma lanceolatumexon
Blg00903.0-exon-Sc0000003-1570713199:3582549..3582967Blg00903.0-exon-Sc0000003-1570713199:3582549..3582967Branchiostoma lanceolatumexon
Blg00903.0-exon-Sc0000003-1570713199:3581601..3581786Blg00903.0-exon-Sc0000003-1570713199:3581601..3581786Branchiostoma lanceolatumexon
Blg00903.0-exon-Sc0000003-1570713199:3579911..3580051Blg00903.0-exon-Sc0000003-1570713199:3579911..3580051Branchiostoma lanceolatumexon
Blg00903.0-exon-Sc0000003-1570713199:3579315..3579623Blg00903.0-exon-Sc0000003-1570713199:3579315..3579623Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:3579315..3583785 -
Properties
Property NameValue
GeneIDBlg00903