Blg00916.3 (mRNA) - B. lanceolatum

Overview
NameBlg00916.3
Unique NameBlg00916.3
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:6127781..6129990-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00916.3 ID=Blg00916.3|Name=Blg00916.3|organism=Branchiostoma lanceolatum|type=mRNA|length=2210bp|location=Sequence derived from alignment at Sc0000003:6127781..6129990- (Branchiostoma lanceolatum)
GTCTGTCTGTGCGTCTGTCTGTGTGTTTGTAGAAAAATATTTCGCAGCCA GAGGCTGAATTGCATTCTTTTACAGATAAAACCAAATGGCAATTTGCAAA TTAGCATTCATACTACACTGTACTATGGACGTCAATATCGGTAACTTTAA TAAATTCATCTTTTCTTCGTGTTTTTGCAGAACCTGCCAGCTTAATCGAT ATCCACGCTCACAGTGTTGTTTTCCAAGAACCATGTCAGAGGGAGACTCG CACAGGAAAGCTGCCGGTGTGTCCACCAACATTTGCCTATCGTCTGGGGG ACAGTTAACTGGCACACCACAGCTTGATCACGAGTCATTTTCTCCAAAAG GGTCCCTCCAGCTTACCCACCCTTCTTATGTGAGCAGAGCCGGAGCTACG GCGCTGCTAACCGTCGCCATAACGGTCCCGTTACTCGGGTTCCTGCTGTT CGTCTGCCGGTGCAGCGGCCGAAATGGGCGGTGTCTTTTGCGGAAGAGGG AGGACTGTGAGTCTCAGGATGCGGAAGGGGTGACAGAAGGGGTCGATAAC CTCACTCCTGAAATCGTTATCACCATCTCATCGGCGTTCGGAACCAGCCA CGTCACTGAAAAGACGGACACGGATGGGTCCGCCATCTTCCCGGCATGCC CCGCGCGCATCCCCCGCACGGTCTCCGCTCCGGACCTACGAGGAGGTGAT CACGTGACTGGGCTGTTGCCGCCATCTTGGAGTTCAAACTCTACAGGTCG CAGTGATCGTCTGGGGTCAAGCGATCTGTCGGTTCGCGCCACAATAGAAC AACTCTCAAAAAGTTGGCATACTCCTTCGATGTCAGGGACAACGTCTAGA GGGGAGTGTCTTTCGCGCTTGAGTTTCCTAGACGACGAATGAGCACCGGC TGACATTCCATAACTTCCCACAATGCACCGTCTGGGAAATGGAAATAGCA AAACGGGCATTTTTACCGGCCATTTACTCTAGATTCAAGCCGGTGTCGTA CTCTGAGAGAAACTGTCGTAAAATCACAGGCCCGTTTTGTGTTTCCATTG CCCGGGGCATTATGGAAAGAGTGAAACTAACGATTGGACCCTGTCATTGG ACAAGATTGGGATCAATGTAATCAATATTTTTGTGATGATCTAGTAAACA AAAAATATATGTTTTTGATATAACAGTTCGACAGCAATATTCCAGAATCT AAATACTACCCTGATCAAATTGAAATTAGAATTTTTAATGATATAGATAT TTTTCCATGAAAATTGAACAAGCGGTTGACATCTTAAAAATCAAATTAAT AGTTTCATACAAAACCTACAGGGGAAGATAGACTGCTAGTATATCTTCCT TGCAATTCTGCGGTTGGTCACTAGATGGCAGTATTTCATCGTGTGCAAAG TTTATTTTACACTGTTAAACTACTAGGCCGAAAGAAACGATTTATATAAA ACAGCTTCAGTTAATTCTCCTAGCTTTTACCATTTGAATAGCTTACAAAA ATCCATATCACTACTAAAATCAACAAACCCACTTACGATGAAAAACGTGG GTCTCTTCATTTTCCACTGCCTTCAAAAAAGAAGTCAAACCCAACCATAG TCAACCTTAGTTAACTTAGAACTTTGACAGTAGTCTAGATAACTATTTTT GATTCCCATGTATTCCCATGTACTTGTTTGTCTGCAATTAGCCTTCGGGC ATGAACTTGCAATAAAGTTATAGTATAAAATGGTTATCACCTTATCTTAG TAGTACTAGTATTTACCACATTATTTCTGACCATAACAATATTATCATTG TAACAGTGATGTATAATGCTTCACCATCGTAACGATGTTGCGACTTACCA CAGCTATAAAACACTGATATTTTGTAGCACGTAGGATAAACCAGTCTTCT AAAATTGTTGTTAAGTAGTAGTTGCCACAAATTGTGTACAGGTCTGTCTG ACACACCTGTTAAGTAACGGTGTTGAGTCATTTATCTGAGTATCAGGCTG GATGGAATTAGTCGCTATTCTACGTACATGTACATGTCATGTTCAACTAA ATAATTCTTTCATTTCTGTACATGTTTGTAAGAGTTCTATCATTTTGTAG ATGTTGTAAGAATTCTATCATTTTGTAGATATTTGTAAGAGGTCTGTCAT TTTTGTTGATATTTATGAGAGTTCTATCATTTTCATAGATATTTGTAAGA GTTCTATCAT

Coding sequence (CDS) from alignment at Sc0000003:6127781..6129990-

>Blg00916.3 ID=Blg00916.3|Name=Blg00916.3|organism=Branchiostoma lanceolatum|type=CDS|length=807bp|location=Sequence derived from alignment at Sc0000003:6127781..6129990- (Branchiostoma lanceolatum)
ATGGCAATTTGCAAATTAGCATTCATACTACACTGTACTATGGACGTCAA
TATCGGTAACTTTAATAAATTCATCTTTTCTTCGTGTTTTTGCAGAACCT
GCCAGCTTAATCGATATCCACGCTCACAGTGTTGTTTTCCAAGAACCATG
TCAGAGGGAGACTCGCACAGGAAAGCTGCCGGTGTGTCCACCAACATTTG
CCTATCGTCTGGGGGACAGTTAACTGGCACACCACAGCTTGATCACGAGT
CATTTTCTCCAAAAGGGTCCCTCCAGCTTACCCACCCTTCTTATGTGAGC
AGAGCCGGAGCTACGGCGCTGCTAACCGTCGCCATAACGGTCCCGTTACT
CGGGTTCCTGCTGTTCGTCTGCCGGTGCAGCGGCCGAAATGGGCGGTGTC
TTTTGCGGAAGAGGGAGGACTGTGAGTCTCAGGATGCGGAAGGGGTGACA
GAAGGGGTCGATAACCTCACTCCTGAAATCGTTATCACCATCTCATCGGC
GTTCGGAACCAGCCACGTCACTGAAAAGACGGACACGGATGGGTCCGCCA
TCTTCCCGGCATGCCCCGCGCGCATCCCCCGCACGGTCTCCGCTCCGGAC
CTACGAGGAGGTGATCACGTGACTGGGCTGTTGCCGCCATCTTGGAGTTC
AAACTCTACAGGTCGCAGTGATCGTCTGGGGTCAAGCGATCTGTCGGTTC
GCGCCACAATAGAACAACTCTCAAAAAGTTGGCATACTCCTTCGATGTCA
GGGACAACGTCTAGAGGGGAGTGTCTTTCGCGCTTGAGTTTCCTAGACGA
CGAATGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00916.3-exon-Sc0000003-1570713199:6128565..6129990Blg00916.3-exon-Sc0000003-1570713199:6128565..6129990Branchiostoma lanceolatumexon
Blg00916.3-exon-Sc0000003-1570713199:6127781..6128267Blg00916.3-exon-Sc0000003-1570713199:6127781..6128267Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00916.3Blg00916.3-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:6127781..6129990 -
Properties
Property NameValue
GeneIDBlg00916