Blg00924.0 (mRNA) - B. lanceolatum

Overview
NameBlg00924.0
Unique NameBlg00924.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:7010587..7016273-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00924.0 ID=Blg00924.0|Name=Blg00924.0|organism=Branchiostoma lanceolatum|type=mRNA|length=5687bp|location=Sequence derived from alignment at Sc0000003:7010587..7016273- (Branchiostoma lanceolatum)
CGTTGATATCGCGCTTTTTACCGTGCAGTAATATGTGTTGCTGCTAGGTG TCGCTTATAGTGTGATTTCACCGTGCACGGGACGCTCGTGTCCCTTTTCA AGTGTCCTTACAGAATGGCGGTGACCAACATAGTGTTCAAGAACATGTTA AGAGGCAACATGGAGTGAACACACCTGCCTGATGTGAACTCAAAACGGAC TCAGCTTTCGTGAGCGGCCCACATTTCTTATCCTTCTCACGAGGAATAAA GACCATTGAGTGCTATATCAAGTGTCCCTGAAACATCTACAAGTGCGCAT TTCACTTCCATTGTGTAGAGATCCCTGCGAACTGGCAAACTGTCGAGTTT CTCTCCTATAAACTCGCGGGTCTGTTTATGTACACAACCTGCAAAAATCC ATGCAGTCAATGAATAGTTTCCCTTTGGCGGTGCGAGTATCGGGAAAAGC AAGTGTTCTCAGCCGGCCGAGCTCGCTGCGTTCCCAGCCTCTCGTGTTTG GACGACTTATTTTCAGAAAACAAACCATGCGCAGATGTCCGACACCCCAC AAAAGAGGAATATATTTTCTCAGACGACTTGAAATGAAGATTTTGGGTAA GGGGAACGCAGATGTTTGAAAATAATGACGAAAATTGTGAAAGAAGCTAA TCTTGTTCACATGTGTGGATAGAAATATGCTGGGAATGCCGAACGATTGC AATAACACAAGCGTTAAACTAGATTTTGCTGTGATTACTTTTTTCTAGCA CAATCTGTGGTGTATTTTTTGACATCTCCAATTTTCACGCCTCCACCAGT AATCAGCCAAGGCCGGTCGTACGCTTGCTGCTCTCCCGCCATATATGCAA ATCCAGCTGTAAACCCCACCCAGGCATTATTCTGATCTGACCAATCAGCT TGCAGATACAATCGTTACCGCACCCTTTGTTGAACATGTCAATCACCGCC CCTCGTCGGTGACCATCAGCCAATCAAGTCTCGTATTACAGAATGTTTTT AAATATTGACCAATAGGGGGGTAGAAACACAGCTGTGTAGTCATGTGGAT GATGTCATTGTGGCTCCGCCCCTAAAACGCCGTCAACAAGTTCGGATTTG AACTGGATGGAGACAAAAAGGGGTAGAGTCGACCTGGAGCAGACGGTGTA AAAACTACTATATCGACTCTGGTCCTTGGAAAAAATTCATTTCCACGGGT AAAGCTTGTTGTGTTGCACGCAGGAAGCCACCATGAGCACCGCCAGAGTG TCGTGTCCGTCCCCGGAGCTGCGGAGAGCTCGGCCCGCCCGGCCGGCTGG AATGCCTCGGAGCTCGGCTTGCAGGCGACTCTTCGGGCCGGTGGACCACG AAGAGCTGGAAAGAGACCTTCGGTCGCAGCTAGCGCAGATAGAGGAGGAT TCCCGGCGCAAATGGAACTTTGACTTTAAATCTGACTGTCCCTTGGACGG CAGGTACGAGTGGGAGAGAGTGAGCGGCGTGTCGTCGTTCTACGTCGGGC GGGTCAACATCTCCGTCTCTGCAGCGGCCGCCGCTTCGCACACCCCCGGG CAGCTGGCCTGCACCGCGCGGTCTACTACGGAAGATTCCCCGGGACTAGT CGGAGAAACGGCCGTGGGAAATGTTGCAAAGGACTCTGCGTGTACCGAGG ACCACAGGGAATCCAGAGTAGACGCGAGAGTAGAGGATTTGGGTGCAGAA ATCAGCTCGACTTCCTCCGCTGGTTCGGAGAGACCAGGTCCGGGCGCCTC GGGGAATACACCCGACTCAACCCCGACCATGTCCCGAGGTGTCAAGCGTC AAACAAGGCTCACAGGTAAGATTCAACCCAATTCCTTCTCCACCCTACCT GAACTTGGTCTTCAAACAGTTTGTAACGTTCTGCCAGCTTGTACAGCACG TGTTGGTGTCGTTTTTTCCGAGATTTGGAAAATTTTTGGCGTGTTACTAC GTAGTGCGTAGTGTGTAAAGCACTGTAAACAAGCCTGGGGAGGGCGCTGA CCTCCGCCCTATTGTTGGGATCATCTCCAAGCAGATATACGGTGCGGCGT ATTTTACGCGGTTTTTGCTGCATTTTGGACGGTATTTTTAGCATTTTCCT CAACGCGAAGGTTCGGAAACGTGGAGCACAAGAGAAGTATACTAAACGTG GCAAAATTAAACGTGTAAAACAAGCTTCGACCTTATATCTGCTTGAAGAT TTTTATCTGAGCGTGTTGGGGCTTGTTCTGCTCTACGGAACCCGCCCCCG GCGCATCGGGCCACGGGAAAAACAACAGCTCCGCTACCTCAGCGATTTCC CCGCGCCCTGTTTATGCATGAAGACTCACTCTCAAGGTCAAGGAAAGGTT TTATCGTAAACAGGTTCACGAAGGTGGAAAAAATAAAGATAAGTGAGAAG GGGGTGAGCGTTGTCTGTCGTTTCCAAGGCTTTGTTGTCATGACAAAATC GTTAATTGTTCTCTCTCGAAGCCATACTTTGGACGGAAAGCAAATGATAA CGTGACCTTGTCTGGGACTTTCTTTTAACTTTTAATGCTTTCCTTCGACA GATTTCCACGTCCAAAGGAAGAGGAAAAGAAGACAGCAAGCAGTGGCCAG CAAGGAAAATCAACAACAGTCGAGATCAGAAACGCTCTCATCTCATCCTG CTGTAGTTTAGAAGGTGAGCCAAACGTTTTTTTTCTTCTTCGTGAAAGTA AAACATTTCTTGTTCTTCACACCACGTACGCTCTTATGCTTTGGCGTAGA ACAAAGGGAAAAACGTAGCTCCAAAACAAAGAACGCTCCAAAGTCCGAAA TACTAGTATTCGCTAGAAAATTAGTTTAATTTTATGAACTGGAGGTTTCT TTGGCTGGTTTGACTAACTCAGTAACGGGCTTGGGGGAAGGCTATTGTTG TCAACACACCGATAAATCTCGGTCGTAAGCGGGGGCTCTAGGCGCCTGTC TTGTCAAAACTAACGCGGGCTAACTGATAGCGTCTCCGGGGTTTCGTCAG AACGCAATATTTGTGTTACTGTTAGACCGCCTTGTGACTCTTGTCTTCAA CAAAGACTTGACAAATGAAATTGGAACCTATTGGGTACCGAAATGGAGGA TGTACAAATATGGTGTTAGCCAGAGGTCCCTACAAGCTCTGTCAGCAAAA TGTCAATTGAAAAGAAGTCTCCAATGTCGTCAGTTGGGCCAGGGTAGTCG AGACAAATAAGGCGGTGGAGGGCGGCCTTTTCGCCGGGACACACAGCAGG GAACCCCGCCGGCCTTGAGGCGAATGGTCCGCAGTGGGACCGCCCTAGTG CCGACCTTTTTGATAAAGTACAGGTGATGGACCCAGATAAGCATGAACGG GAAACTGACCGGTGTTTGGATTTGTCTGGTCAAGACTGACCAGCGCTGAC CATGTGTAAACGCCAGGAAATCAGAGGACAACAAATGTCCCATCTGGACT GTATTGTTTTTCTTCAGAGACAAAACATTCTTCTTCTAACGTTTTATAAC ATCTTTACATCCATTTTTGAAAAAAAATATAGAAGACAATATATTCTCCC CGTTAAAGATAAATGACTGGCATTTCGTGGCTTCAAATCAAGCCAGGATG GGTGTTGACAGGAAGATATAGGTTCACTTCTCTCGCACTGACCACTGTAC CTCAGTTGAAAAAGGACAGGCCCCAAACCGGCGCCGCCCTGGCTCCGACG TGTAGCGAAAGTTAGCAGGTAGCCTGGTTTACCACACCGCCGCCTTGTCA CAGCCTCTTCTCTTCACCAAAAATAGTTGAAGTTGAACCAAGAAAGTTTG ACAAAAAGTACACGAAAGAAACGTCGTTACGCTCGAATTTGAAAATGCTG TCCGTGGAAATATTACAAATTCATGGAAAACCACGATTACGGTATCGCTT CCTTATTGGGAAATCCCTAGTGTATACGTCAGTGTTTGGCAAGTGGAAAG AAAAAAACAGCTGAAAGTCAGACGACACATTGTGTGTGCACCTGTGCAGG AGAGCGGGACCCTGTTGTCATGGTAACCTTTCATGAGCCTCACCCCTGGG ACACTGGCATGCTGTCAGCTGTTCACCCAGGAAAGGCGCTTTGTAACGTC CCAGGGGACCACGCGTACGCTTTGTGAAGCCCCAGCTTCACACAAAAAGT CGCGCCTTTTCGATGACACTCAACATGCGGTGTGTGAGAGAGGAGGGAAA AAGACGTCTCCAGACTTGTCTGAGTAAGACTAAGAGAAAGAAATTTGCAT TCTGACCAGTCTTACGGAGGGAAAACCCCGTGAAATTGACGTCTATTCAT CTAGAAATGGTGTTGCAAAGCGAACGCAGCAAGCCTCAAAATCGTATTTT GTGACTGCAAACCCAGAGGATTACGTCACAATGTTGACGAAATTGATATC TCTACAAACTAATCCATTGGCTAGCTTGTTTATTTATTTAGCGAGGAGTA CACAACGTATGTGCTAAATTTGTAGGCCAGCTGTCCTAGGACTTGTTTAC TTCTAAACCCCGCCGCTTGTATAACAAGCAGCGCCACACGCACACATTCC ATGCCCAGGAAAAGCAACTAGAAAATTAACGACTTTTTAAATTAAACAGA ACCTTCAATTATCATAATCTGAGTGAGATTTGATACCCGGTCAGATTGAG ACTAGAAAAGATCTACCTGCAGGCAATTGAAATAAAGACAGCAGAAAAAT AGGTCTATCTGATATCAGCGCCGTTGGCTGTTCTTTGGAATTGTTGACGA AAACAATGATTCACGCTTAGGAATAGTCAGATTCATGTCATTACAATTTG TATACTTGAATTAGTGTTTTCTGGACGTTGTTGTTGAAATGTATACTTTG TTGACATATGCCTCTATGTACATGATTAACACATTTTCTCCTTCATATGC AGACTACACAAGTCAGGAGAGGGAAGGGTGGCACGTGGAATCACCGAATC TTGTTGCTGTAGATGTCATCAAACCAGCTTCATCCAATCGGAGTTGCGTT CAACATATGAAACACAAAGACACCTTTTTTGTTATTGAAAAAAAGGGCGC GTACATCATGTGACACTTCCAGCGTGGCCCATGCACAACTAGCTGTAGAT TTCTTGTATTTGAATCGTGCATAATTAATCGATTTATGCAAATCTCCTGT GCATATTTGATGAAGGGAATGTTGCAGTCCCTTGCTAGAGTGTAAGAAAG TGAATGTGCAAATATCGTTCTATAATTATGGCTGTGCGAATCCCCCCCAG TGGGACGCTAAGTTACTTGTGTCAAAACGGTGTCAACAATCAAGGGTAGG ACGACACGATCTGTACACAGCGTGTTACTGTTTATGTTTGTGTCATGTAC ATAGAAGGGGAAAGTATGGTGAGTGCGTTTGCGCAGGCCAGCCCCAATAC TGCCAAATATATTTGCTTTATTTTACATAATTCCAAGCTATGTAAAGAAA AATGCACAAGCTTGCACAATGCGTTCTCTCCGACGGAACTGTGTAGTATT TATATAGAACTCCCTGCTAAGAGTTTGACATCAATGTATATACAAATTTC ATCAAAGAATTTTGTAGTGCTATCGTGTATATATTTTTGTTAGGAATGAC AATGCCTACATTGTATAGAGATCGAACACTGTGGACAGAAAAATAAAAAG TCAAAATCATAAAACTTTGAGTCGTGATGAAATGAAT

Coding sequence (CDS) from alignment at Sc0000003:7010587..7016273-

>Blg00924.0 ID=Blg00924.0|Name=Blg00924.0|organism=Branchiostoma lanceolatum|type=CDS|length=693bp|location=Sequence derived from alignment at Sc0000003:7010587..7016273- (Branchiostoma lanceolatum)
ATGAGCACCGCCAGAGTGTCGTGTCCGTCCCCGGAGCTGCGGAGAGCTCG
GCCCGCCCGGCCGGCTGGAATGCCTCGGAGCTCGGCTTGCAGGCGACTCT
TCGGGCCGGTGGACCACGAAGAGCTGGAAAGAGACCTTCGGTCGCAGCTA
GCGCAGATAGAGGAGGATTCCCGGCGCAAATGGAACTTTGACTTTAAATC
TGACTGTCCCTTGGACGGCAGGTACGAGTGGGAGAGAGTGAGCGGCGTGT
CGTCGTTCTACGTCGGGCGGGTCAACATCTCCGTCTCTGCAGCGGCCGCC
GCTTCGCACACCCCCGGGCAGCTGGCCTGCACCGCGCGGTCTACTACGGA
AGATTCCCCGGGACTAGTCGGAGAAACGGCCGTGGGAAATGTTGCAAAGG
ACTCTGCGTGTACCGAGGACCACAGGGAATCCAGAGTAGACGCGAGAGTA
GAGGATTTGGGTGCAGAAATCAGCTCGACTTCCTCCGCTGGTTCGGAGAG
ACCAGGTCCGGGCGCCTCGGGGAATACACCCGACTCAACCCCGACCATGT
CCCGAGGTGTCAAGCGTCAAACAAGGCTCACAGATTTCCACGTCCAAAGG
AAGAGGAAAAGAAGACAGCAAGCAGTGGCCAGCAAGGAAAATCAACAACA
GTCGAGATCAGAAACGCTCTCATCTCATCCTGCTGTAGTTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00924.0Blg00924.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00924.0-exon-Sc0000003-1570713199:7015982..7016273Blg00924.0-exon-Sc0000003-1570713199:7015982..7016273Branchiostoma lanceolatumexon
Blg00924.0-exon-Sc0000003-1570713199:7014459..7015050Blg00924.0-exon-Sc0000003-1570713199:7014459..7015050Branchiostoma lanceolatumexon
Blg00924.0-exon-Sc0000003-1570713199:7013610..7013722Blg00924.0-exon-Sc0000003-1570713199:7013610..7013722Branchiostoma lanceolatumexon
Blg00924.0-exon-Sc0000003-1570713199:7010587..7011371Blg00924.0-exon-Sc0000003-1570713199:7010587..7011371Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:7010587..7016273 -
Properties
Property NameValue
GeneIDBlg00924