Blg00925.0 (mRNA) - B. lanceolatum

Overview
NameBlg00925.0
Unique NameBlg00925.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:2250117..2252462-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00925.0 ID=Blg00925.0|Name=Blg00925.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2346bp|location=Sequence derived from alignment at Sc0000003:2250117..2252462- (Branchiostoma lanceolatum)
ATGCAGGTAGACCTTTATGGTTTGTGCCCCTTGCAGTATTTCTCCCTGAA GGACACTCTGGGAAATTCCCCTTCTCGAAGCAATAGTCCATGGTTTTTGC TAATTTCCAAGCAGATGTTGGGGTGGAAGATCGTAACATTTCCTGACTGC TTGTCTGTTCTAAATCTGATAGCCGTAATTCTATGGGTGCTGTAAGAAAA TGTTGGCTGTCAAAGAAGTAAGGCAGTCGGAAAATTTCTCAATCGTCCAA TCCAACATCTGATTGGAGATTTAACGATTAAGATTCAGTCATTAGTCAAT GTTTTTCAGTGTATTTTTGGTATGGACATCGAAGAGAGAGAATGATCATA CTGAAAATAAATCATACTGTTTGTAATGAACATATAGTTCATGTTTGCTA TATAAAAACTGTGTTATTGATATCATTGTTCAGATTAGTTAATGAATGAA TGAATGAAGACCTTTATTGTAATTAAATGCCATAGATTGAATCTGTTACA ATTCTGTTGCATGTGGTTGATTGATTGATTGATCGATTCCAGATAAGATG TCTCAGAAGGAGCGACCTTACGGCTTGTCCAAGGTCGTGACCTTGGCCGT GCTGCCAAGACTGTACATGGAGGAACTTGTCTTAGAACTTGGAAGACGGA ACATCGCCGTCCAAAACTCCTCCGGCCGAGAAGATCTCATCAACACCCTC GCTGACGTCATCATGCATGAGTTCTGTGGGCTGACGACCGTTTCGTTTCA AAACACCTCAAACAACGAGGAACAGCCAAGCGAGAGTAGAGAGGCCGACA GTCGCTCTTGTGAGAATTTGACACCAATCAGAGAAGTGTCGAATTCCAGG CTGCAAATGCCTGGTGCAGTCCCAAACGTTTCTGCATTCCAGAAAAGGAA ATGGAGAGAAAACCAGACAGCTACAAGCGCAAGCGTAGAAATAACTCCCC CAAGACAATCGCAAGAAAACACAGAAGAACCCAGAAGTAAGAAACAGCAG ACAGACAAACATCACTCTGCAACAGTCACAAGTACTGAGGAACCATCCCA GGCCAACTTGTCCAGACAACTCAGCAAAGGAAGTGTTGAAAATGAAAGTC TGCAACTAGAAAACAGTCCATCGTCAGATGTGGTTTTTGTGAAGGTTGAG CCAGCCTCAGATAGAGAGAATGTGGGACAAAACTCATGGAGAGATTTGAG ACAAACGACAGAAGTTGTACAGGACCAAGCAGATGTAGGGAGTGGTTCGA ATGAATATCTTGTGAGAATGGAAGACTACGATATGCAGGGGGTGGGTAGG AGGTGTGGGGATGTGCATGGGGGTTTGGGGAACACTGGAGAGATGGTTAG CGAGTGGTGTGTGGAGCAGAATGTGATACTGGATGGAGGGGTTTCAATGG AGATGGGTCAACCATTTGTGAATCAGCAGCAACAAGAAATGGAGGTGGGT TTGTTTGTTTTGGTAAACCACCACAAAGTGTAACAGTAATACTGTACATT TATTGTTTCCTGTGTTTGTTTGAGCCTTTTTATTCATTCATGAAAAGTTT AGATCGGCTCGCAGGCCGCTTTTCCCTGAGGTCATGAGGTGGGGATCCAA CAAAATACCATGACGAAGATACAGTTTATACAGTTTACATGATTGAAGTT ATGAATCCATAAAGCAAGTTGGCAAGTATAAATAAAGCATGCTTATAAGA GCTTGACTGCTTGGTGCCATCTTAACTAAGTTATGATAGGTTCTGGAACT TGTCATATGGTAGCTGCTATGAACCAAGGGACCTATTTCTCAGCGTCCCA TCACTTTAACATCTAGGATCAGGATTCAAAAGTAGAATGACTGCTGTGGG ATTTGAACTCAGGACCTTGTGGTTAGGAACAAGGATTGCTAGTCATGACT AATACACGTTACTAAGCATTGATAATTGCTTACAGTGTTTTTCTTTCATA CACCACTTACAGGTGCCTGAGGCAAGCTGCAGTACCGGCAAGCTCCACAG GTGTCCCCACTGCAGTTACACGACCACCTGGTCCTCGGTGCTGACACGTC ATCTGCGGACCCACACGGGAGAGAAACCCTTCAAGTGTCCCGACTGCGAC TACTCCGCCTCTCAGAAGGGCACCCTGGACAGACACATGGCCGTGCACCG TGGAGAGAGACCCTTTGTGTGCGTGGAGTGCGGCTATAGGGCCGCGGACA AGTCACGACTTACGAGGCACTTTAAGACTCACAGTTTGAACAGGCTGTAT GTGTGTGAGCAGTGTGGGTTCAGCACCCAGGATGGGAGCCTTTTGATAGC CCATGAAGCAACCCATGCAGCACACCCAGCTGGTAACCCATGTTGA

Coding sequence (CDS) from alignment at Sc0000003:2250117..2252462-

>Blg00925.0 ID=Blg00925.0|Name=Blg00925.0|organism=Branchiostoma lanceolatum|type=CDS|length=600bp|location=Sequence derived from alignment at Sc0000003:2250117..2252462- (Branchiostoma lanceolatum)
ATGCAGGTAGACCTTTATGATAAGATGTCTCAGAAGGAGCGACCTTACGG
CTTGTCCAAGGTCGTGACCTTGGCCGTGCTGCCAAGACTGTACATGGAGG
AACTTGTCTTAGAACTTGGAAGACGGAACATCGCCGTCCAAAACTCCTCC
GGCCGAGAAGATCTCATCAACACCCTCGCTGACGTCATCATGCATGAGTT
CTGTGGGCTGACGACCGTGCCTGAGGCAAGCTGCAGTACCGGCAAGCTCC
ACAGGTGTCCCCACTGCAGTTACACGACCACCTGGTCCTCGGTGCTGACA
CGTCATCTGCGGACCCACACGGGAGAGAAACCCTTCAAGTGTCCCGACTG
CGACTACTCCGCCTCTCAGAAGGGCACCCTGGACAGACACATGGCCGTGC
ACCGTGGAGAGAGACCCTTTGTGTGCGTGGAGTGCGGCTATAGGGCCGCG
GACAAGTCACGACTTACGAGGCACTTTAAGACTCACAGTTTGAACAGGCT
GTATGTGTGTGAGCAGTGTGGGTTCAGCACCCAGGATGGGAGCCTTTTGA
TAGCCCATGAAGCAACCCATGCAGCACACCCAGCTGGTAACCCATGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00925.0Blg00925.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00925.0-exon-Sc0000003-1570713199:2252444..2252462Blg00925.0-exon-Sc0000003-1570713199:2252444..2252462Branchiostoma lanceolatumexon
Blg00925.0-exon-Sc0000003-1570713199:2251724..2251920Blg00925.0-exon-Sc0000003-1570713199:2251724..2251920Branchiostoma lanceolatumexon
Blg00925.0-exon-Sc0000003-1570713199:2250117..2250500Blg00925.0-exon-Sc0000003-1570713199:2250117..2250500Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:2250117..2252462 -
Properties
Property NameValue
GeneIDBlg00925