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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:5158211..5163284- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00940.0 ID=Blg00940.0|Name=Blg00940.0|organism=Branchiostoma lanceolatum|type=mRNA|length=5074bp|location=Sequence derived from alignment at Sc0000003:5158211..5163284- (Branchiostoma lanceolatum)
ATGGAGACGTATGCTGATAGGGGAGGGGATAGTGTAACAGCCGTGACATT
TGTCATGTTAGACACAATAAAGCTACGACCACAGTTTCTGTCGACCCAGG
CTTGGTGTGTGTTGTCTTGTACACAATCCTACCCTAATCCGATATAGACC
ATGTAGATAGAGACAATCCTTCAATACTTCTCAAATGTCATAGTACGTTG
AACTTGGGGAGGAGGCTGTTGATGTTTTATTCTTTAGATATACGCACTCT
TTAAAAGTGTTGTTTGGCTCTTAAAGTGCATCGATTTATATGTACTTTAT
TTCCGCCCTCGGGCTACCAACAAAATCCTTGGGAGGGCGGGGCTGTACCA
AATCCACATAAACTCGCCCTGCCCATCCTTTAACTATTACTTGACTTTCT
CCAACTCTATCGTCCGCAGGTTTTCAACGCTGGCGTTGCATTCTGGGAGT
GGACAAATATAAACAGATTGCGTGAACTTAACTCCACTGCCAATGAAGAC
TGTGAGTGAAGCATTTATTCTTCTGTGTTTATTACCACTTTAATCGTTTT
AATTGTCTTAAAAGTCTATGCCAAATGGAATATGCACGAAATTGATCGTG
ATGTGTATTTAAGTTAATACCCACATTTCTATCCTATATACTTTGAATGG
CGCACGATTTTACGACGTCAATATGTACATCAAAGCTTTAATAACTTGTT
CTTTCTGTCTGTCTGTCTGAGTGTTTTACCAGTGCAAGTACTAGTGTACG
ATACAAAACTTGCCCAGCCAAGCGAAAGAAATTTAGGTTTTATCTGCAAT
TGCCGACCATGAAAAGTCTGTGTTAGTATGCTTGTGAAGAAAAATGTTTA
AAAAGAAATACCAATTTGTCTGTTATTTGAATCCGTAAAAACAAGTGTNT
TTGAATCCGTAGAAACAAGTGTAAATGTGAAATATAGACGATTTGTTTCA
TCACTGCCTTTTTTCTTTCTTTCAGTGATCACACCTTCTATCTATGGCAT
GTACTGTGAGATCGCAGTACTCGGAGTAGTGGGACTCCTATCAATCGTGC
TTCTCTTCACTAATATATTGGTGAGTTGCTGCCAACTATATATACATATC
ACAATTGCGATTAGAAATCCGACAGCTAAAATACGTTTTATATGCATGAC
TGCATGTATTTGATTAGATAAAGTGTCAAACAATTTGGGGCTACACTGCA
ATTCTTTTGCACATATTTGTTTTGTTCAGTCACCTCTGAAACAGGCCTAG
GGAGATCATGAAGTGCAAGAATCTGCTTGCAATTGCTATAAAGTATTGCA
TACATCATGGAACCTAAATTCTAATCTCCAAGCAGATTTACACCGGGCGC
GAAAATCGTTTATGCTAGCCAGAGAAGGTACCGGGCTGGCTGGAGCTTAC
CAGCTGACTAGACCTTCTCTAGCTAGCATATACGACTTTCGCGCCCGGTG
TAGATCTGCTTGGAGATTACCTAAATTCCCCAACCGGTTGAAAAAAATCC
ACATATACCTGTTATTGTAGATTCACCAAAGCCGTCATTAAGCCAATCGT
ATATTTGACATATGGTGCACACACACACACACAAACACACACACACACAC
ACACACACACAAATAAAACAAACTGATAGAAGCTGACTAACATCTGTTTT
CCACCCATTTTTAGAACAAGCGAGGCGCCATGTTCCTGTGGATTTTCGGC
GTCTCTGTACAGATTATAGTGGAATTCTGGCTGGTGACCATCATGTACGT
CTTCTTCCTGGAGAGGGTAAGTGTGAAACAAGCCATCCTTCTTAATAGGA
ACGTTTATGATGTTCGGAATACTGCATATTGTAGCCATTGAAACCATAGG
CCAGTTCATAGCGACATCAAACGGTTCCGATTGGTACTGCAGCTCGGTGG
GACACTTTGCTTGGGCCCTCCAATGAGGTTAGAAATCGATTTTTTTTAAA
CCTCCTTGGTGTATCTATGATACGGTTATTTTCATCGTATACGTAGTACA
GGATGGTTGATTGAAAGAAGTTCTATTTTCTCTAAAGGTCAAAGTGCACT
GGCTTTTACAATTTGTATCCTGTATCAAGATATGATTTGAAAATTGCAGA
CGCTTATTATGCTGAAATCAGTGTGACTATGCTATAGAATATGTCAAGGT
AGAGATTGCAATCTGGCAGAATCGACGATTATGCACATAGAGATCCCGAT
AGGAGTCTGTAATTTCTTCTCAGTGCATGTCACACAAGACAGAACTTTTA
ACTTCGATTCATATCACTTTAGATCAACGGGTTGACTTGAAACTCAGGAT
TTATGAATGGAAGACCATCCTAACATCATGATCGCGATCTCTGTCGAAAG
AAACTCTGATAGATCGGGATCTCTACCGATAAAATCGGCGATACTGCCAG
ATCGCATTTTCTACCCAGACACAATATAAAGAGACTGATCTTTAATGACA
CAACAAAAGCACAGCGACTTTCGTAAGGTCTACTACATCTATACATACAA
ACGAATAGGTGCATACAAATGAGTTTGACTACACACAATCGTATGGGATA
GAGCAACATATCGTAATTTTAGGTGTCGTATACTTATACATTGCTTGTTC
TAATGTCCAAACATTCTTTGGTGTATATACCTATCTGTACACAGTGAGGA
TTATCACCCCCTAGTATGTAATTGAATTCGAATCTATCTAGTAGGGATCG
TACATTAGATTATTGTTAACTCATGGTAAATGCTTCATGTCGCTTTTGCC
ATTATACATGCTGCTAAAGGACAACTTAGCTAAACGTGTAGAGGAGACAG
GCTACGACAACTGCCTGTCACTCCAGGTAACCATAGCAATGTGACGTGTG
CGTTCGTGTGTTCTAACTTTAGCTTCGTCCTAACATGGCGGTGTACATAA
AATACGAAATGGAATGAAACGAATTGGAGAGAAAATTGTAATGATTTTCT
GTCGATATAATCTGCTATGCAAGGCTATGTTCAAGTTGGGATCTATGACT
TACTTGTGAGACAGTTGCTTTAGACAGTTAGTTGATGTATTTATAAGACG
AAAGGTATGGTGAAACTACAGCTTTGTTGTACAATTCTCTCTCCAGACGG
TAGACTGGAAACCGATTCCACTTGTAGACAACAAGATTCTGTCTTTCATC
GGCGGTGGGTTCGCCCGTGGGATTCTTCTCGTTATCAAGGTACGTGACAC
TATACTTTTTCTTCTGTCCATGGAAGCGTAATTCATTTATTCAGCTTCAC
AGATTAAACATCTGTGAGGAGCCGGCAACAGAAACCTGGTTTCTTTACAG
GACCGGCCCCTCAGCAAATATACAATACAATTGACAATAAATATAGTAAA
AGCTTAACATTTAAATGATACAATAATGAGAGTTGATAGAACAGTAATAA
AACTACAATACAAATTTAGGGATAATTAGAAATGAACAAGAGGAAAAGGA
AAACAAGAGGTATGTAATACTTGAGACGAAACGAAATGCTTTTTTCGGTC
GGTAGCTGATATAGTGGAATACAGCTTTGATTACGGCTCCCATTTTATTA
TATGTAGCCTAAAAGACGTTTGTGTACAGAGCAAAATATTCAACTTTTCA
TGTCAAGTAGTTTCCGAAGTTTAACCATCTAACACTGATGTTAGAAATGG
GTATATTGTTCTTTGTACGTGGCACTGTTGAAATACGTTATGAAAGACTT
TAGTGCAGTGCCACGTCGTCCTTTTCTGTCCAAAAGCAAGCTAGCTAGAA
TGCCTTAAGAAGCGAGAAGAAGTCGAACCTATAAATAGTAGACAAGTATA
GATTAGTCCTATTAGACATAGTAAGATATCACATTTCATTACGTTATATT
ATCACCACTGTATGTAACGTTATTCCTTTGCTTATCACCATGACCTGTAC
TTAGCTTGTTTAAGCATAAATGTACAGTAAAGGTCTTTCATTCAATAATA
ATAATCTGCGGATATGGGGCCCGGGTACTGATGCATGACGATTGTAGACA
TATCTCTCTCAAGAAGGTGTAGTATTGATGTATAATACTTGGTTTGTTCC
AGTGTTACTGTCTCTTGTGCGTGTCGTGGCGAACGGGGGAGCTGAAGAGA
AGACAAAAGTACCTGGAGGAAAACCAGATCCACTTCAGACCGGTAATTCA
TCCATTTTTGCCAAACCGTTTCTCCTCAGTTTTTAACTACAACTGTTAAA
TACCTGTTCTGAAATAGCAATCTTGAACACAATGATGTTGAAACAAACAG
GCAACAAAAGTAAGACCGAAATCGTCAATGGAGCTACATATTTCATAAAA
GAAAAAAATGAAAGACATAGAATGGCGAATGGAACCGAATACGAAGTGAA
ATGATATAAGACATTTTTATCTCTTGCAATATTTGTTTAGAGTGTAAACG
TTGTCATTCTAAATCTGGATCTAATGCTAACATAAGGTTTAAGATTATGA
TACCATATTGAAATTCTTACGTTTTTTTGTCGTTCTTTTGTTACCAGGGT
GGTGGTGACCCCTACACTGACCCGTACATCTACAGAGGCAACGCACCTCC
CAACTACGCCCCTCCCGGCCGTCCGGGGTACTTCAACTCACGACCTCCAC
CGTACGTTACAAGTTCTATATCTCACTACACGAGATCTGATTTTAAACAC
ATGCGAAGCATCTGTAAAGTATGTTTGATTTCATACAGACCTATCTTAGC
ACGACAACTAGAAATGTGACTTTCAATGTGACTTACAATGTACCAATGTT
CCGTCCAATGAAAACAACACATTGCTGTCAGAAAGTGTCTGGTCGATATA
TCCTGAATCGTAACGTTACATATTTGTCTAAAACAACTTGCGCCATATGC
TTTTATTATGGATGGAGTTGATATATCACAGTCACCTGTCAATAGCAGAA
GGGGACTTTTCTTGGTTATCATATCAGTTATCATGATTTGGAAACAAACC
TTCAACATTTCAATAATAAACATCCACCTTATCTTTCCGTTCTAGGAGTA
TCGATGAAGAGTCGCCTCCGTCCTTCACCAGCGGCTCGGAAATCAAGATT
CCGCGCCCGAAAGTCTACCGGTGA Coding sequence (CDS) from alignment at Sc0000003:5158211..5163284- >Blg00940.0 ID=Blg00940.0|Name=Blg00940.0|organism=Branchiostoma lanceolatum|type=CDS|length=687bp|location=Sequence derived from alignment at Sc0000003:5158211..5163284- (Branchiostoma lanceolatum)
ATGGAGACGTATGCTGATAGGGGAGGGGATAGTGTAACAGCCGTTTTCAA
CGCTGGCGTTGCATTCTGGGAGTGGACAAATATAAACAGATTGCGTGAAC
TTAACTCCACTGCCAATGAAGACTTGATCACACCTTCTATCTATGGCATG
TACTGTGAGATCGCAGTACTCGGAGTAGTGGGACTCCTATCAATCGTGCT
TCTCTTCACTAATATATTGAACAAGCGAGGCGCCATGTTCCTGTGGATTT
TCGGCGTCTCTGTACAGATTATAGTGGAATTCTGGCTGGTGACCATCATG
TACGTCTTCTTCCTGGAGAGGACGGTAGACTGGAAACCGATTCCACTTGT
AGACAACAAGATTCTGTCTTTCATCGGCGGTGGGTTCGCCCGTGGGATTC
TTCTCGTTATCAAGTGTTACTGTCTCTTGTGCGTGTCGTGGCGAACGGGG
GAGCTGAAGAGAAGACAAAAGTACCTGGAGGAAAACCAGATCCACTTCAG
ACCGGGTGGTGGTGACCCCTACACTGACCCGTACATCTACAGAGGCAACG
CACCTCCCAACTACGCCCCTCCCGGCCGTCCGGGGTACTTCAACTCACGA
CCTCCACCGAGTATCGATGAAGAGTCGCCTCCGTCCTTCACCAGCGGCTC
GGAAATCAAGATTCCGCGCCCGAAAGTCTACCGGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00940.0-exon-Sc0000003-1570713199:5163243..5163284 | Blg00940.0-exon-Sc0000003-1570713199:5163243..5163284 | Branchiostoma lanceolatum | exon |
| Blg00940.0-exon-Sc0000003-1570713199:5162784..5162865 | Blg00940.0-exon-Sc0000003-1570713199:5162784..5162865 | Branchiostoma lanceolatum | exon |
| Blg00940.0-exon-Sc0000003-1570713199:5162215..5162309 | Blg00940.0-exon-Sc0000003-1570713199:5162215..5162309 | Branchiostoma lanceolatum | exon |
| Blg00940.0-exon-Sc0000003-1570713199:5161519..5161620 | Blg00940.0-exon-Sc0000003-1570713199:5161519..5161620 | Branchiostoma lanceolatum | exon |
| Blg00940.0-exon-Sc0000003-1570713199:5160096..5160188 | Blg00940.0-exon-Sc0000003-1570713199:5160096..5160188 | Branchiostoma lanceolatum | exon |
| Blg00940.0-exon-Sc0000003-1570713199:5159143..5159232 | Blg00940.0-exon-Sc0000003-1570713199:5159143..5159232 | Branchiostoma lanceolatum | exon |
| Blg00940.0-exon-Sc0000003-1570713199:5158684..5158787 | Blg00940.0-exon-Sc0000003-1570713199:5158684..5158787 | Branchiostoma lanceolatum | exon |
| Blg00940.0-exon-Sc0000003-1570713199:5158211..5158289 | Blg00940.0-exon-Sc0000003-1570713199:5158211..5158289 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:5158211..5163284 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00940 |
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