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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:2236438..2241725+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00944.0 ID=Blg00944.0|Name=Blg00944.0|organism=Branchiostoma lanceolatum|type=mRNA|length=5288bp|location=Sequence derived from alignment at Sc0000003:2236438..2241725+ (Branchiostoma lanceolatum)
ATGGTTGGTGCCACAGCAAGCCTGCCACCATCAGTGAACCCGAAGCCTGG
CCAAGTTCTGGTGTACCGCAACGTACAGATAGAGAACTGCAAGTTTGTGC
AAGTTGGGGACAACAACAGCGTGATAATAGAGAAAGTGACACCACAGGAA
GATGGTCAGTACTGTTTCTAACTTGATTCATGTCACCAGCACATAATTAT
GTTCCTAATAGGTGTTGCTTTATTGGGAAAGAAAATATAATTTGTAATTT
GTGTTTTTGTGCACACATTGTGGGTGGGTGTTTGACAGGGAGGTCACATT
GATATCAAAACTTTGGCTTTGACATATGACAAAATAAAATAAATTGATGC
TCCTGCATCAAAGCTAAAATCCCTTCAATCATTTTGATGTACATGTATCC
TTATAGTATATAAGTCTGAGAGAAACTCTTTTTCTGTTTTCCAGCATTTG
TGAAAGCCTGCTGCGAACTTGACATCAATCCCAAGACAGCAGATGACATC
AGAGAGAAACTAAGTAACAAGGAAGTTCTGGAGCAGTTTGCTAAGAAAAT
GGAAACATATCAAGTGACATGCAAGATACAAGCTGCTACCAAAGGGTGCA
TCCTGTTGGAGCTGGAGGTTCCTACAGAAGAGGACCGGCTGCAGCTCCTC
CGCATGGCCAGAGACGGGACGTTCCAGCAGGTTCTCCTGGAGACGTTCCT
GCCGGAGTTTGCGGCCGAGGGGAGGGCCGTGAACATGAACCTGGCCATCG
GCGTGAGGAACCCGTCACGGGACATGGTGGACAAACTGCAGCGAGCCGTG
GCGTCAAGTGGTGGGTGGAGATTTCTTACATACAATTATCCCAGGTCTGT
ATAAATATATACTTATAAGATTTCCAGCTGCAAAATTTGAGTCAAGACAC
CATTTTTTTCATTCCTCTTGATAACAGATACTGTATGTTTGTGTAGCAAC
ATGTACATTGAAGAAAAACTTTGTCAATAGGACAGGACCGTAAATGTATT
CCTCTGAATTGGTGATGACGTGTTCTACAATACAAATGAAAATACCATCA
TGGCAATGTTTGAGTTGCCTTTTTTGTTTTCATTATAGACCAGGAGGATG
TTGTTGTGGTGGACATTCCAGCAGCTACACACAACAGCCCTCCAGTTACC
TCAGACCAAGACCAACCAGACTCAGCTGAAGGCCAGACTTCAAAGCAGTC
TGATGACCCAGAAGACATGGCAGAAGGTTCTTAGGACTTTTTGTGTGTGT
TTATTGTTATGTTCGAAATGTGATCAACACTGAAGTGTAGTTTTATTGCT
ATATGTTAATTTAAGGTAAAAGCTGCAATCTAGCTAATCTATATAGCTCT
CCTGTATATGGTTTTAGACCTACCTTCTTGTAACATGATTTTATTCACAG
ACTCCTTATAGTAACAGACAAAAAGCATGCATGTTATACAATGTCATGTA
CAAAAAATGTATTTTTAAGTTATAACAAACATCCTTCCTATTTATTTGTT
ATTAGATCATAAGAACTTTTCAGGTGGAGAACTTTCAGATGCGGCTCCAA
GCAAAGCTGCCTTTGACACAGACGTGACCCAAAAACTCGCGTCAGAGGAT
GATGACAGAGAGGGCGAGATAACTGTCTCTGTTGAAGGTACTTTTAATTT
TTGAGAATAAAGACCTACCAAATCTTACATGTAGATTCATTGCACAAGAT
CAGTTAGATTAGATTTACTTTAGAATAAAGTTACAGTGGCAGTACTGGCA
GTCGGTAACTTTCCTTCAAATCATGCAGAAACAAATGAATGATGATGATG
ATATGCAGAATTGAAACTGTTACAGTAATTACTACATTATGTATAATCAT
CATCTACACGTATGCCTTACAGACAAAGACATGCCATACAATCATGACTT
GTCATCAAAAGGTTACAGAATATAATTTACTGGTTTTCCCTTCAAGGCTA
TGCAGAGGCAGTGCCACTGGGTACCGGGGCGGCTGCAACAAACGTCCCAC
AAGGAGATTTTGACGACAAGTTCCTCACGTGTGACATTTGCCAGAACATC
TTCGAGGACCCCCGAATCCTTCCATGTCACCACACCTTTTGTACCAGGTG
TCTGAAAAAATGGTGCAAGGGAAAAAGCGAGTTTACCTGTCCTACCTGTC
GGCACCAGGTTACCCTGCAGGAAACAGGTGTCATGGGTCTTCCTTCTGAT
TTCTACAAAAAGAACTTGCTAGATTTCAGGGCCGCCCAAAAGAGCAAGGA
AGCTCGTGCCCAGTGTCAGATGTGTGAATCAGGGGCCAGAGTTGAAGGGT
CATGTAGGGACTGTCACTTCTTCCTCTGTAAAAACTGCATCATAATACAT
GACAAAACTCCAGTACTGAGGGACCATCATATCACAATACTTGACAGCCC
TGGGGAGTACTGTCCCAAACACACCAACCAGTCCCTGACCTTCTACTGCC
AGCTCTGCGCCAAGCTCGTGTGCCAAGACTGTATCACAACAGAGCACCCA
CTTGGGCCAAACCACGACCCACAGGAGGTTGGTATGGTTGCAATGAAGTA
CAAGGTTGCATTAGTGGCATTAGTGGAGGAAAATGAGACCAAATTGAAGG
AAACAGACAACATTTTCAGAACAGACTTAATCTGTATCAAAACAAACAGT
GAACTACAGAAAAAGAAAATCCAATCACATTTTGCACAGCTGAGAGCAAA
ACTGGACAAGGAGGAGCAGGACATGACCTCCAGGCTAAGGGAAATGGAAG
GGGAACAACAAAAGTCCCTTCTAGAAAGAAGAAAAGATTTTGAGAAAACT
TTAAAACCTGCTGAAGACAAACTTAAGTTCTGTAGAGACATTCTTGTTGG
AGGGAGCGATGTAGACATTCTCACATTAGGGCAGCAACTAGTAGACAACC
TAAACCATTTGAAAACAAAAGAGATCAAACATATGGGATTAAGAAACAAA
GTAGCATTTTCAAGTCGCACAGATTTTGAGAGGTTCACATGTAGTCCAGC
AACTCTCTCATGGGATAATGATAGTATCATGGTCACAGAACTCCCTGTAG
AAAGCCTGCCAACTAACATTATCTACCGACAACATAACCTTTGGAGAGCA
TTCCAAGTCACAGTAATTCCTCTAGCCAGTCTAGGGGGCCCAGATACTCC
TTATGATGAGTATTCTTTCAAAACGATGATAATGAGGCACCAATATGAGT
TTCCAGAGGAGCAGTGTGCTAGATTAACCCCCATCAGAATCAGTGAGGGG
GTATTTGAAGCAGTCTGGAGGCCACAAAAATCAGGGAACCATGTGGTGGG
GTTAACAGAAAGTTTCGGAAGGCAGGGATATGTTGTATGGGACAGATCTA
GCGGTTTTCTCCCTGTAGATGTGGGTAGTAACAACCCTGTACTGAGGTTT
GGGCAGAAGGGCAGCCAGCTGGGGCAGTTTGACAGACCTAGGGATGTAGC
AGTCAGTGGGGACAGGCTGTATGTAGCTGATGCTGGGAACAATCGTGTTC
AGGTGTTTGATCTGAGTGGGAACTTTTGCTTCTCATTCCCAACAACTGCT
AGCCTTGCATGTCTTGCAGTTCAGACTGATGACACCATAGTGGTGAATTG
TCATGAGGAAGTGATGAAATTTTCCCCATCAGGAGAACTGATGAACAAAT
TTTCTCTGGGTGAACATTGCATCAGCCCCTATGGCCTGGCAGTACAGAGG
GATGGGAGGGTTGTTGTAGCTGAACCAGGCAAACACAGCATCTTCCTGTT
TGAGGCAGATGGAACACTGGTGAAACAGGTAGGAGGGCTGGGGGACAGAG
AAGGGCAGCTTAACCGACCGTGTTTTATCTGTGTGGATGAAGAAGACAAC
ATCATTGTGGCAGATACAGGGAACAGTCGTGTTCAGGTGTTTGACAAGGA
CCTACATTTCCAACATAAGTTTGGGGTTAAAGGTACGCAGCCACAGGACA
TGAGCTACCCTATGGGGTTGTCAGCTGACAGCAGCGGGAACATAGTTCTG
GCAAACATTGGGGAGACAATAGATGAAACTGTACAAGGTGTAAACCTTCA
GGTGTTCCGCCTAGATGGTACCTGGGTGTCAACCATCAGCAGTGATGGAG
ACAAACTAAATCGACCCCACGGAATGGCTGTGACAGAGGATGGACATGTG
TTTGTAGCTGATACTAAGGACCACTGTATGAGGAAGTACAGATATATGTA
AGGGACTAAAGCTTGCTCTTTCAAAAATATTCAAGTCTTAGTCCTTCTCC
ATGCCGAAAAACAACCTTTCGCCACCAAATGTGATTAAGTAGTTACTTAC
ACAGGCCTAGCTACAGGGTTAGGCAGCAGGGCACTTACAATGTAGATACT
ACATTTTGTACATTTAAATTTGGTTTTTAGCCATAGGCGATGCTGTAGGG
CTGATGTGAATAAGGATTTGCACATATGGCAGGCACCAAAAAGTTCAACT
CATAAGCCTGATAATAAGGATGCTATGTCACCTCTATGATTGTATTGTTA
TAGTAATGGACCGTTATGTTAACAAGCTATGATGATGATGTTAACTGTTA
CCACTTAAGTTTAATATTTGACCATTTTCAGTTGTCCTATCGAAGATAGC
ACCTGCCTTGAGGCACTGAGCCCAAATACTCAATTGGATTGTAGACTTTG
ATTGAAGAATTTGATATCATAAATACCAGTATTTTTTTTTTAAACCTTTT
TTTCTTTACTGAATGAGATTTGAATACTGAGAGATGTTAGTGTGTTGTAT
ACAGCTGATTCAAGTGTTTTGAATTGTACTACTCTTGTTGTAGTCTAAAG
CTAGTAAAAGTACCCCCAAAAATAGTATTGGAAATTCTAATGCTTTTGAA
CAGTTTGTCCTAGTGTTATGAGAACAGTAAAACTGTACAGCTGGATTATA
TGACAGATAGCTTAGTATAATGCATTTATATATTCAAAATTGTATGATAC
TGTTTCTGTGTGACTGTACCAATACAGGCTTGAAAATTCTGACTTTAGCT
TGTTGAAAACATGAAGATCTGATTGAATCAATCATTATACAATGTGATGC
TGTACAGAGAATTGGGCTTTCAAATACGTTTAATAGTGTATCTTTCCTTC
ATACATTACTTAAAATGTACCAGTATTTGTACCAAGCATAGTGACAGGTC
CTAGTCTCATTTAGACTGACTGATATATGATTAAGTGTACATTGATATTG
TTGATTCTAGATTGTATATGTTTTTTGTGATTTGATCCTGTGCTGTGTTC
AAGTTGATAGGATTTAATAAATGGTTGATGGTGATGAA Coding sequence (CDS) from alignment at Sc0000003:2236438..2241725+ >Blg00944.0 ID=Blg00944.0|Name=Blg00944.0|organism=Branchiostoma lanceolatum|type=CDS|length=1272bp|location=Sequence derived from alignment at Sc0000003:2236438..2241725+ (Branchiostoma lanceolatum)
ATGGTTGGTGCCACAGCAAGCCTGCCACCATCAGTGAACCCGAAGCCTGG
CCAAGTTCTGGTGTACCGCAACGTACAGATAGAGAACTGCAAGTTTGTGC
AAGTTGGGGACAACAACAGCGTGATAATAGAGAAAGTGACACCACAGGAA
GATGCATTTGTGAAAGCCTGCTGCGAACTTGACATCAATCCCAAGACAGC
AGATGACATCAGAGAGAAACTAAGTAACAAGGAAGTTCTGGAGCAGTTTG
CTAAGAAAATGGAAACATATCAAGTGACATGCAAGATACAAGCTGCTACC
AAAGGGTGCATCCTGTTGGAGCTGGAGGTTCCTACAGAAGAGGACCGGCT
GCAGCTCCTCCGCATGGCCAGAGACGGGACGTTCCAGCAGGTTCTCCTGG
AGACGTTCCTGCCGGAGTTTGCGGCCGAGGGGAGGGCCGTGAACATGAAC
CTGGCCATCGGCGTGAGGAACCCGTCACGGGACATGGTGGACAAACTGCA
GCGAGCCGTGGCGTCAAGTGACCAGGAGGATGTTGTTGTGGTGGACATTC
CAGCAGCTACACACAACAGCCCTCCAGTTACCTCAGACCAAGACCAACCA
GACTCAGCTGAAGGCCAGACTTCAAAGCAGTCTGATGACCCAGAAGACAT
GGCAGAAGGCTATGCAGAGGCAGTGCCACTGGGTACCGGGGCGGCTGCAA
CAAACGTCCCACAAGGAGATTTTGACGACAAGTTCCTCACGTGTGACATT
TGCCAGAACATCTTCGAGGACCCCCGAATCCTTCCATGTCACCACACCTT
TTGTACCAGCCCTGGGGAGTACTGTCCCAAACACACCAACCAGTCCCTGA
CCTTCTACTGCCAGCTCTGCGCCAAGCTCGTGTGCCAAGACTGTATCACA
ACAGAGCACCCACTTGGGCCAAACCACGACCCACAGGAGGTTGGAGAACT
GATGAACAAATTTTCTCTGGGTGAACATTGCATCAGCCCCTATGGCCTGG
CAGTACAGAGGGATGGGAGGGTTGTTGTAGCTGAACCAGGCAAACACAGC
ATCTTCCTGTTTGAGGCAGATGGAACACTGGTGAAACAGGTAGGAGGGCT
GGGGGACAGAGAAGGGCAGCTTAACCGACCGTGTTTTATCTGTGTGGATG
AAGAAGACAACATCATTGTGGCAGATACAGGGAACAGTCGTGTTCAGGTG
TTTGACAAGGACCTACATTTCCAACATAAGTTTGGGGTTAAAGGTACGCA
GCCACAGGACATGTGTTTGTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00944.0-exon-Sc0000003-1570713199:2236438..2236591 | Blg00944.0-exon-Sc0000003-1570713199:2236438..2236591 | Branchiostoma lanceolatum | exon |
| Blg00944.0-exon-Sc0000003-1570713199:2236882..2237247 | Blg00944.0-exon-Sc0000003-1570713199:2236882..2237247 | Branchiostoma lanceolatum | exon |
| Blg00944.0-exon-Sc0000003-1570713199:2237526..2237663 | Blg00944.0-exon-Sc0000003-1570713199:2237526..2237663 | Branchiostoma lanceolatum | exon |
| Blg00944.0-exon-Sc0000003-1570713199:2238384..2238534 | Blg00944.0-exon-Sc0000003-1570713199:2238384..2238534 | Branchiostoma lanceolatum | exon |
| Blg00944.0-exon-Sc0000003-1570713199:2238835..2238968 | Blg00944.0-exon-Sc0000003-1570713199:2238835..2238968 | Branchiostoma lanceolatum | exon |
| Blg00944.0-exon-Sc0000003-1570713199:2240070..2240386 | Blg00944.0-exon-Sc0000003-1570713199:2240070..2240386 | Branchiostoma lanceolatum | exon |
| Blg00944.0-exon-Sc0000003-1570713199:2240583..2241725 | Blg00944.0-exon-Sc0000003-1570713199:2240583..2241725 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:2236438..2241725 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00944 |
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