|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:5586478..5590025+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00973.1 ID=Blg00973.1|Name=Blg00973.1|organism=Branchiostoma lanceolatum|type=mRNA|length=3548bp|location=Sequence derived from alignment at Sc0000003:5586478..5590025+ (Branchiostoma lanceolatum)
CAAAAACTAAGTGCAGCTGGTGATGACGTCATCGTCAAGATGGCGGTCCC
GGCACGAATTTTGCGCCAGAAAAACTTTATTTTCCAGTTCGCAGCGGCAC
TTAGCTTCGCACCGCGCATTGTACTCACTAACCAGGTAGGTTCGAGACTT
AGATATTCATCTAAGCTCGTTTCATAGGATGCCAACCGCCAGTTTTGATG
TGAAGTCGTGCTTTCGAAGGTAGCTTTCGGTCAAGGGGGAGGGGGGCGTG
GCACCTAACTTAACTTTTCTTCTTTCAATCCTATCTTGTTGAAAACTTAT
GTTATACCTAGGTGTGTACATCAGGATCACATGGCTGTGATGAGGTGAGT
AAAGCCCAGGCAGCAGCCGAAGCCAGACAGAAGTACGGGAACCCGGAGCC
CACCATCTTCAGTAAGATCCTGGATGGGTCCATACCAGCAGACATCATAC
ATAAGGATGACAAGGTAAAAACAACAGTGATGACATTTTTTGTCATTTTT
GTGTTGACAACCATGCACTGAGTGTGTGTGCATGACAAGTTCTCTAGATC
TGCTTTTGAAAAATGTTATGATGTAGAGGAAGGTGTGATCTTGCAAATAC
CGTAAATACTTTTGAATTTGTGCTGATTTGATTTTGCAGTGGGGAGAAAA
TGGAATGTTCATAGTTTTTTAGTCAGCGGTTGAAACAAGCATTTTTGCAG
TGGTTTCAAGTTTGCGGTGAAGTGGTTACCATGGAAACGGTGAACATTAA
ACCACCAACTGAGTGTTTTCCTCTGCAGTGCATTGCCTTCCGTGATGTGA
GCCCGCAGGCACCAAAACACTTCCTGGTCATCCCTAGAGCACCCATCCCA
CAGCTGAGCATGGCACAGGACGACGACTCACAGGTTTGGGCTGTGTGTTT
GTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAGTCCATGTGT
GTGTGTGTGTGTGTGTTGCTGTATGTGTGTGTGTATGTTTGTGTGTGTGT
GTGTTCATGATTTGATGTATGTTTTTGATATGTGTGTGTGTATATGCTTC
TGAATGTATTGGTTACTTGCAAAATTAATTGGAGTAATGAATTCATCACT
GTGGCACCCTCATGTATTGCCCTGTTCTTAAGATGCTAAGATATGCACCA
TGCAATGATGCCACCTTGTGTCAATGGATGGCACTGCATGACACTGTTTC
TGTATTTCCAGCTTCTTGGCCACCTACTGAATGTTGCAAGGAAGACAGCA
GTGAAGGAAGGGCTGGACAATGGGTACAGAGTAGGTAAGTTACAGACATA
TATCAGTGATTGTTTTATTGTAGTAAAATGCAATAGATGTATACTATAAA
AAGTTTGTGTTACACAGACTACAGCAGGGCTCGAAATTCATTTTTGGAAA
TAGGTGCACTGGTGCACCCATCCCAAAAAATTAGGTGCACAGAAAGAATT
TTGGGTGCACCACATAGAATAAAGTTGAATGTCAGCAAAACATACTTACA
ATGTTTAACGTTCTTAAGAACTTCAATCTGTAATACTATAGCTAACCTTA
AAATTTCAAACAAGTGATACATCAAATAAAGTACAACAAAAGGTTATATT
ACTTTTTCTGGTAGAACATTCTGTATACCTAGTGTACACTAGTACCCTTA
TCTTATAGCCTACAAAAATATCTAGGTGCACTGGTGCGCCCACAGTCAAA
AATTAGGTGCACAGCTCCAATTTTGGGTGCACACAGGTGCACATGCACAC
ACTATTTCGAGCCCTGCTACAGTGACACCTAGCTGCAGTGCAAGGTGGAA
CCAGTCATTATTGCCTTGAGAAAGGTGACAGATGATCACTAAAATGTTGA
CTGTTATAAATATTTGGTTATTAATGAAACATTTTGTCATTTGGTTAGCA
TATCTCTTCTTTTGCTCCCCCCAGTTGGCAATGGTGGCTCTTTGATTCAC
CCCATTTGTCCCTTACAAAACGGTTACAGTAAGTCTTCTTCTTCCTCTTC
TCCCCTCAGTTATCAATGACGGCAAAGACGGGTCCCAGTCCGTGTACCAC
CTACACGTCCACGTCCTGGGCGGCAGACAGATGGGCTGGCCACCAGGCTA
GGCTTCCGCTGTTACCATGGGAACCGGAGGGATTGTACCAACGAAGGTCA
ACATTTTGAAGTTGACAGAGTCTAGCTGCAAGACTGTAAAATTGTAAAGT
TTATGACACACCATTGATGGGGGTAAGATTGGTGACATTACACAGGTATG
AAATAATGTATTGTAAATCGATGAATGTTAGACATCCAGGTAGTAAGATA
CACAAAATAACAGTTACTGCAGCCAAATTTTTCAAATCTATCCAGTTGCT
TAGGTAACTGTTGTCTTGAATGATATATTGTAAGATACAGTAAAACCTAT
ACAAGTGAACACCACTACATAAGGACCACCTGGCCAATACAGTGACCACT
TTTTGGTGGTCCCTTTGACACAAGTCCTGTCTATAGTGACCACCTGTCCA
CATAGACCATATTTTATCGGTCCTGAGTGGTCTTCTTGGGCAGGTTTGGC
TGTATGTTGACTTGTAAGATGAGGATCATCTCGTAGTGTGACTCTGTTAG
ATCATCCATGACTTCCGTAATCTAAATCATTCTTACATATTTGCCATTCA
AATATGTGCTCTTTGTATTAGTGAGGACTTATATGTATGTCTGTGTACAC
CTGAAAAGCTCACCTGTGTTTGGACAGGTCTGTGTTTGTAAAGGATGATT
TCAGATTAGCTACCAGTCGGCCAAGCAGATGTGAAGGGGCTAGACTGCAG
TGTCAAACTTCTTTGTAAATGTTACTGTGCTCTTGGACATTTCAAACAAA
GAGGAGTCAGAGAAAGGTTGCTACTTATATCTGCTTGGAGATTATAAGAT
TGCATGTAGACTATATAGCAGTTCCTCAAGGTGTATTTTTTGTGTCTTGG
GTTCCAATAAACTCTTTGGTGACAAAGACAGGAAGGTTGATCGATTCTAA
TGCAGCTATTGTTGTGTGGATTGAGTAACCATAGTCTACAACAATAAACT
CAATACAAAACTTACTCAAGCTACTGAATAAGTTTTAACTTTTGTAAATG
GTCAGATGTCTATCTTTTGTCGCAATCCACAGCAAAAAGATTAGGTACAT
ATTTTCCCTGGGTGGTTCCAGAAAATCGTGTATAGTCTATTACAAACATG
TTTGTGCCAGCCTCCTTTGCAGACCACACTTTGAAAGTTTGCAAAGGCCG
CTGTGTTTGTGGTCTGCCAGCAGGAGACATGGAGGCCTTAGATACTATGT
ATTCTGTCTGATCTATGTCAAACAGAATTTTCTATACACTACCTGTATCA
AGTGTGGAAAAGATCTGACTCTATCATCAGTAGATTTTACGGTCACCGCC
CAAGAATATGCGGAACTAAGCCAGTTTAAGTCGCTATCAAATAAATCTTC
ATGGCTGTTATCAGGTGTGGTGTGTGGAGTATAATTGAGTGGGTTGGTTT
TCTTCTGTTGATATTGGATTTCTGACCTCTAAAAGGTGAAGAATTTAG Coding sequence (CDS) from alignment at Sc0000003:5586478..5590025+ >Blg00973.1 ID=Blg00973.1|Name=Blg00973.1|organism=Branchiostoma lanceolatum|type=CDS|length=519bp|location=Sequence derived from alignment at Sc0000003:5586478..5590025+ (Branchiostoma lanceolatum)
ATGGCGGTCCCGGCACGAATTTTGCGCCAGAAAAACTTTATTTTCCAGTT
CGCAGCGGCACTTAGCTTCGCACCGCGCATTGTACTCACTAACCAGGTGT
GTACATCAGGATCACATGGCTGTGATGAGGTGAGTAAAGCCCAGGCAGCA
GCCGAAGCCAGACAGAAGTACGGGAACCCGGAGCCCACCATCTTCAGTAA
GATCCTGGATGGGTCCATACCAGCAGACATCATACATAAGGATGACAAGT
GCATTGCCTTCCGTGATGTGAGCCCGCAGGCACCAAAACACTTCCTGGTC
ATCCCTAGAGCACCCATCCCACAGCTGAGCATGGCACAGGACGACGACTC
ACAGCTTCTTGGCCACCTACTGAATGTTGCAAGGAAGACAGCAGTGAAGG
AAGGGCTGGACAATGGGTACAGAGTAGTTATCAATGACGGCAAAGACGGG
TCCCAGTCCGTGTACCACCTACACGTCCACGTCCTGGGCGGCAGACAGAT
GGGCTGGCCACCAGGCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00973.1-exon-Sc0000003-1570713199:5586478..5586612 | Blg00973.1-exon-Sc0000003-1570713199:5586478..5586612 | Branchiostoma lanceolatum | exon |
| Blg00973.1-exon-Sc0000003-1570713199:5586789..5586941 | Blg00973.1-exon-Sc0000003-1570713199:5586789..5586941 | Branchiostoma lanceolatum | exon |
| Blg00973.1-exon-Sc0000003-1570713199:5587256..5587360 | Blg00973.1-exon-Sc0000003-1570713199:5587256..5587360 | Branchiostoma lanceolatum | exon |
| Blg00973.1-exon-Sc0000003-1570713199:5587689..5587761 | Blg00973.1-exon-Sc0000003-1570713199:5587689..5587761 | Branchiostoma lanceolatum | exon |
| Blg00973.1-exon-Sc0000003-1570713199:5588487..5590025 | Blg00973.1-exon-Sc0000003-1570713199:5588487..5590025 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:5586478..5590025 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00973 |
|
