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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:6038646..6046659- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00977.0 ID=Blg00977.0|Name=Blg00977.0|organism=Branchiostoma lanceolatum|type=mRNA|length=8014bp|location=Sequence derived from alignment at Sc0000003:6038646..6046659- (Branchiostoma lanceolatum)
CTTTAACAAGTGTTACCAAAAGGACGACTGAGAGAACCAAGGCGTCAACT
ATGTCTCTGGATTCCTCTTTGGAATTTTTCTCCCGTCGGTACTCATTAAA
ACCAGAGTTTCCACTTGATCACGTGACTTCTCTTCTATTGTGATAATTGG
TGGAGATAAGCTGAATCGTTTGCCATAAACTTTGGAAATTGTCAAATTGG
AATGTATTGCACCAATTTGGCAAAATTGGCCTCGTGTGGGCAGTCGGACA
TTTCCCTCGCAGATTTGGACAAACGGCAAATGATCAACTGGTTTTGACCA
ATTAGCACAGTAGAATTAGAGTTGTGGACACTTAAACTATAACTGTTATG
AGTAGAAGCCATGTGATCAAGTGAAAACGGGAGTTTTACCGAGCAGGTGA
TATTTCCCAAGAATACTAAAGCGATTTTCGCGCTAACAAAAATATATTGT
CCATACAGCCGCCATAGATACAAGTTATGTGACTGGGTGAAAACAGTAAT
GTCGACAAATCTGAAGACAGCAGTGCTAACAACAACAATTAAAAATATAT
TGCCCTCTGGGGAAGTGAATTAGGAACCATTACGTCCCGCCCAACTAGTA
TAATTACGCCCACCACTCGAAAACAATATAAGTCAGGCGACTCAGGTAAA
ATCTTCAGTGGAACAGGTGATCTGCGGACGACAACAGCTGGCAACATCTT
CAACAAGTGTTACCAAAAGGACGACTGAGAGAAGCAAGGCGTCAACTATG
TCTAAGGTAGAATTTGACTTTTCACATTGCTGGTCATGCACAGGCTCTGA
AGAGGAACAGTGTTAGGTATCGAGATAAAACTATGAATATTCCGGCGCTA
GATTCTTCAACTAGAACAACATTACCGATCGATTTAACCCTGTAAAAGAA
CGATCTGAATCCGTTTAATACGCAGGACACTGGTTTGTCGTGCGGTAAAA
AAGTTTATTTGCCAAAAGACAAAATGCCAATAAGCATAATTGTTGTTTCC
TTATCAGTGCACAGTTAGGATCATAGTAGACTAGACTTATGTTTTTTTGT
TAAGGATAAGCTAGTCCATTCCATGATAGCTCAAATATGATGTTCAATAT
GTGGATTCCCAGAAGATCTAAGTTTGTTTTAGTATATGTAGATGTTTTGC
CGTGTTCGTCACGGATGAGAACAAGATTGAAACCTATTATCAACACGCAT
GCTTTAGCTTGAAAGTCCAGTTGTCGACGATGGACGCCCATTTTAAGATG
TAGTCTATTCAGCTTAGATTACCACTCAGAGTTTAATGTATCCTCCGGAC
TTCGTGACAGAATTCCTCTTACTTTCTTTGCTTTTTTGCTCCTTGCAAAC
ATCTTAATATATGCTCACTTTGCAATCGAAATTAACCCTCTCTTAAACTT
AGACATATGAAAAAAAGAAGGGTGATGCCTTTGTTTAACAAGCACCATTA
TGTCTAGGGTAGGGTTTGACTTATCAAATTACTGGTTATGCACAGGCACT
GAAGAGGAACAGCGTTAGGTATCGAGATAAAACTATGAATATTCCGGCGC
TAGATTCTTCAACTAGAACAACATTACCGATCGATTTGACCCTGTAAAAG
AACGATCCAAATCCGTTTAATACGCAGGACACTGGTTTATCGTGGCGTAG
AAAAGTTTATTTGCCAAAATACAAAATGCCAATAAGCCTAACTGTTGTTT
CCTTATTCGTGATCATAGTAGACTAGACTTGTATTTCTTTGTTAAGGACA
AGCTAGTCCATTCCATGATAGCTCAAATATGATGTTCATTATGTGGATTC
CCAGAAGATCTAAGTTTGTTTTAGTATATGTAGATGTTTTGCCGTGTTCG
TCACGGATGAGAACAAGATTGAAACCGATTATCAACACGCATGCTTTAGC
TTGAAAGTCCAGTTGTCGACGATGCATGTCGATGAAACATGGCACGCCCA
TTTTAAGATGTAGTCTATTCAGCATAGATTACCGCTCAGGGCTTAATGTA
CCCTACGGACTTCGCGACAGAATTCCTCTTACTTTCCTCTTACTTTCTTT
GCTTTTCTGCTCCTTGGAAACATGTTGATATATGCTCTCTTTGCAATCGA
AATCAACCCTTTCTTAAACTTAGACACATGAAAAAAAAGAAGGGTGATGC
CTTTGTTTAACAAGCACCATTAGTTGTATCTTTAAACTTTTAATAAACGT
GTACTGATATTTTTTATTCTGTAATTGCAGGAGAAGTTTGTGCGTACCAA
GCCCCACTTGAATGTTGGAACCATCGGCCACGCGGATCATGGAAAGACCA
CGCTTACTGCTGCCATATGCACAACACGTAAGGGACTTTTAAAACAAGGG
TCCATAATGATTGTTAATTATTATTTCTATAACGGTGAGACTACATGTAT
CTATTCCGTTGTCTAACTTAAGAAGTCTATTCTTAAACTCACACTGGATT
TCGTTCGAACGCCTACCTATAAGTAAGTTCTAGCTTGGCAAAAACTAAAA
AAAGACCGTTCTCTCTCTTCCTAACTTTCCATATCCCTATTTATAATTAG
TTTGTTGAAAATAGGTCACAGTTCGTAACACAGTACATCGATTTTTTTGT
TCATCTAGTGGCTAAACGGTATGGTGGCCAGGCAAGAGACTTTGATTCCA
TTGATAACTCTCCCGAAGAAAGAGCTCGAGGAATAACCATCAACACTGCA
CATGTAGACTACAACACTCCAACAAGGCATTATGCTCATATTGACTGTCC
GGGACACGAAGACTACGTCAAGGTAATAACCCCTTGTTTCATGCATAGAA
TTACGTCATACGTGTAGTGCAGGTTAGTGTCAGCACACATGGTAGACATT
CTTATCGGACAGTCATGAATGTTTCGTGCAGACTATACCTTTCTTTTGAC
GGAAAATGTTGTCTGAGAGACTTGTCGTTTTTTAAAAAATGGCAAAAAAT
ACGTCGTACGTATATGTACACGCGCGCGGCTTACGTTTTTTATGCTTTTT
GTGTCTAACACACCAACATCAGAGACTGAACGTCATCGTCATGCTAACGA
CCAGGTATCTGCCTTGAACTTTAGCCGTTATAGGTCGTAAACTTGCATAT
TCTATTAAATGACCTATGACTATGTACAGTACTGTTAAACATCCAACACT
ATCATATTTCCAAGAACATGATCACTGGCGCAGCAAAGATGAACGGGGCT
ATTCTGGTTGTATCCGCTGCGGACGGACCCATGCCGCAGACCAGGGAACA
CATCCTACTGGCCAGACAGGTGAGTTGAAACACAACTTGGCAACTGTAAA
AGCCTTTATGAATACCGTTCCTAATTAGTATCTGAATCTTTGAAACCTTT
AATAGAAATTAAACATGTAGCAACTTTAATTACCTTCGATGCAAGTGGGA
GTTCGTACATACTGGTGTTCATGAATATGTGTGACATGGTTTCAGGTGGG
CGTTCCGTACATAGTGGTGTTCATGAATATGTGTGACATGGTTTCAGGTG
GGCGTTCCGTACATAGTGGTGTTCATGAATATGTGTGACATGGTTTCAGG
TGGGCGTTCCGAACATAGTGGTGTTCATGAATATGTGTGACATGGTGGAC
GATGAAGAACAACTGAAGCTGGTGGAGATGGAAGTTAGGGAACTTCTCAG
CGATTATGACTTCCCTGGGGACAGCCTCCCGGTCATACAAGGATCTGCAT
TAAAAGCCCTTGAGGTAAGTACATACAAACATACACTGCTGAATTACGTT
GATCTTACGAAACAAATCGTTACACACAATATTACACATCGTTCATGATA
CGCACAACAACTATGACGCAGTCTGCAATTGTCTGTTGTACAGACGGATA
GTTTAGGGTAGAAATGAATTGTACAGTCTATTTGTCCTAGCTAATTCAGT
TATTTCACTTCGGAATGTTCGTTACCCTTGGTAAGCACGTATGTGGTGAG
TTGAAAGACCAGACTGTTGTTGGAACAAATTAGAACACATGTGTGACACC
ACGTATACTCTAGGGTGTGCAAGAGTGGGAGGAGAAGATCGTTGAGCTGG
CGGCGGCTCTTGACCGCTACATCCCTGAACCTGAGCGGGCGGTAGACAAA
CCGTTCCTGATGCCAGTCGAGGACGTCTTCTCCATCCAAGGTAAGTGTAT
TAGTAAGTGCCTAATAGTATGTTCAATTCAATTCAATGTTGAGTAATATG
TGAAATAAGATGCATAAAAGCACTGACGAAAACATACAAATTGCTTGGAT
ATCAATAGAAAATATCCAAAACTTAAGAGAAGCTTGTGGCTTTGTATGTG
TTTATTTGAATATCCTATCAAGCCACATTCTGTTAGCTAATGTCGTTGGG
TGCCATAAACAGAATTAACACGTTACTAATAGGACTGAACCACTTTTTGA
GTTGACTTTGTATGCCTCCTATGCCATCATCACTGGCAAGAACACAAAAC
ATTAAGCATTCTCACGTGAAACCAGATTTTGAGATGCTGTTCGTCTGTAG
ATTGGGTAATAAATTTAGTGCACTACATCTAGAAACAAACATATTTTGTT
TTACAGGTCGCGGCACAGTTGCGACAGGCAGGATTGAACGTGGGATCATC
AAAGTTGGAGAAGAAGTGGAAATAGTTGGGATCAAGGAAACAACTTCAAC
GGTTTGCACAGGTTAGTAAAGCAACCATGACATNTGTACGACTTGCACAG
GTTAGTAAAGCAACCATGACATTCTCATTCGTCACTGAGAACCTTCCTGT
CACATTGTTTTGCTTTTTTAAAAGAGTGAGATGAATTACTGTTCGCAGGC
GTTGAAATATTTCGGAAACTGCTGGATGACTGCAGTTGCTCCACCATACC
AAGCAACCATTCATCAAAACGATGTCCTTGTCACAGAACCTACCTGTCAA
ATTTTTCTGTTTTTCTTTTTCGTAGAGAGTAAGTTAATTCAATTACTGTT
CCCAGGTGTTGAGATGTTTCGCAAACTGCTGGACGAAGGCAGGGCTGGTG
AAAACGTCGGTGTTCTGCTGAGAGGTACGAAAAGGGATGAAGTGGAACGA
GGTCAGGTGTTGGCCAAGCCTGGAAGCATCACTCCTCATACCAAATTTGA
AGCTGAGGTGAGGTGTAGTGAGTGTGGCTTTCAGATAAGGGATATCGCCT
TGTACTAACACATTGTGAATCCGTGCTCGCGCTGTGCCACCATGTTGGCA
TACAGAAGTAATTTAAAGGAACAGCTTTCTTACCTAGGGCAAGTCATAAA
AGAAATGTTCCTACTGTGACATGTCCAACAGTTTGAGGGGTGGATTGATC
CCCATAACCACATAAATTCATAAAAGGATTAGACTGTCTTCCCAGCCAAG
AATAATGGCAGGGACAGATTACCATAATAACTATCAGAAAATTCAATTTT
TCTAGATCTCTGTACTGGTTTCCATAGGAACATTGCCAAACCATGCAGAA
TAGATTAATTTTTTATATAGTTTTACTGGGGTCTTTGAATTAAGTTATAC
ACTGAATCAGGTTCAACGAGTTGTGAAGATGACATCTTAAATCTACGTTG
TTGTTCATGTACTGACACAGGTGTACGTTCTGAGTAAAAAGGAAGGCGGA
CGTCATACGCCGTTTTTCAAAGGATACCGACCTCAGTTCTATTTCCGGAC
CACGGACGTCACAGGAGACATTTCGCTTCCCGAGGGGGTGGTAAGTTGTG
CAAACATAAGTCGTCATGTTTACCTCTATTTAAGCAAAGCGCCGTTTCTT
CCGTTGCTTCTCTCTCATAGTCATAGTTTGAGCTTTTGTCCTTAAGATAT
AGATTGAAGCCGTGACCTCGTGACCCAATAGTCACATTGTGGCAAATCTT
AAGACGAAAACATACAATTTTATCTTACATTACAAGCATACTAGACGTGT
CGACGGGGGCCCATTGAGGTACAGACAATCCTATTAAGTATTAAAAAAGC
CTTACAAATCGGTTTTCCCGACCTTTCTTACTGAGATACAAACCTAAACC
ACTAACAAGTAATCATGCAAACCGTCTCAAGACCTGTCTCAACTTCTGAC
GAAAAGTTCAGATATGAATAGAGTGACGAGTTACTGACACTGTTCTTGCT
ATATCTAATGGAAACGATATGGCATAATCTACTTCGCTGTATATAACTTC
GTGAAGATTGGTTTTTGTTTGAAAGATAATCTGAGATTGTTACTGAAATG
CGGAAATATACCATCTTGTACTATGCCCATGATGCTCCGGCACCCTACAT
GTTAGAAAATAATTAATAAGTTTGCCTTTCTCTGGCTTTCCACAGGAAAT
GGTGATGCCGGGAGATAACGTCCCGATGACTGTAGAGCTGATCGCCCCCA
TCGCCATGGAAAAAGGCCTGCGGTTCGCCGTCCGTGAGGGGGGCCGGACA
GTCGGTGTCGGGACCGTGGCTAAGATATTCGACTAGGATTAAAGGTACTT
AGAGCCTTATATCGATCTATCATTTCTAATCTTCACCTTTTTTTATACAT
GCTTAGCTGTATGCATTTGCGTATATGCTATTCTTAAGCCACGTGTAAGC
ATGCTTAAACGGTGAAATATATAGGAAAGAAGACAATGTTGCCTCTTATG
TATAAAGCCATAAGATTAATTCAATATTTGCACAAAGGCTGAAAATGTGT
GCAGACAAATCTTAATGAATTCTAATGAAGTCTTTCCTACTAATGTAAAC
GTTGTTGAAATATTCTCCCTGGACCCATACCAAAATTGAAGCACAACATG
AAACTCAAAGCACACAAAANTGAAACTCAAAACACACAAAATTGAAGCAC
AACAAGAAAACTCAACATGTAGTTCGACGATGCCCCTTCAGTTATAAAAA
TGACACCTGTATTGTTCAGTAACATTTGTAACATTTTTCATTTATGGACA
TATGTGCTGTATCCGACCGACAAATCTATGTACNGCTATGTACAGATAGT
TCCTTAAATTACTTGAAATCTGCTGTTCTGATTTTTCAGGCTTTTCGGGT
GACAGAGGACTCCCTCCGGCCGGTAGCTGCCTCGACTGCTGAGCTGTTTG
ATCCCAGTAACTAGTAGTAAAGTAGAGTGGCATGTAGTCAGTTGGGTTAT
GGGTGCTTTCTAGCCAGATATCATCTATATTATGAGCGTGTTCATTCGTT
ACTATCGTCTCCATGCATATCTTTTTCTAAGATTTAAGCTTTGTACTTTG
TGGTAAACAGAATAATACAATGTTCTTCACCACTGACATTGTCTATCAGA
ATGTCTTTGATTGCAGTAGTCAAATAGTCTCTGCGGTCTCTATCATTAAA
GTACATATTTACAGCAGAAAGTTGTGTCACATTACATTATGTTTAATGTG
AGTACTTGTCTTTTTAGCCTATTCATTGAGATAAGCTTTACAAAGAGTCA
ACAGGGGTCAGGTCATCAAAGAAAGCAACAACTGTTAAAACGAAAGCTTA
GCTTACATTAATCTTCTTTCTTTTACGGATCTGTTCTTATGCTGAAGTAA
ATCATGAAAAAAAAACTATCTGCAATCCAAATGTCAAGACCCGATTCTTC
AGGACAACAGATACATTGAAAAAACTGCTACGATAGAATTTTCTCTTAAA
TCATGCTTATGTGCTCCTATTTTGCATATGTCATTGTGTGCATCTTTGTC
TAAGCTACCTACATGCCTAAAATCATGAAAATCAGTTGTTCCTTTCTTCA
CTTATCCTCTTCCTACATTTCTTACAAAAACACCCTTGCAACTCCAGAAA
TAGCCGCTAGGGGGTAAAACGTATGTCACTCCTTTCCGACCACAAGAGCT
ATCTACTACCCAAAAAGTATGACTATGATAGGTCCAGAACGCCAGATATC
AAAACCAAAGGTTCCGCTGCAGTACCTAGGGAACCAACGAGGGGGCCCAA
ACTCGAGTCATTTCCAGTGTTTACCACATCACACCAAATATGAAACCAGT
ACATTTAGACGATCTCGAGTTATCTTCTTGACCAACACACACACACACAC
ACACACACACACAC Coding sequence (CDS) from alignment at Sc0000003:6038646..6046659- >Blg00977.0 ID=Blg00977.0|Name=Blg00977.0|organism=Branchiostoma lanceolatum|type=CDS|length=1185bp|location=Sequence derived from alignment at Sc0000003:6038646..6046659- (Branchiostoma lanceolatum)
ATGTCTAAGGAGAAGTTTGTGCGTACCAAGCCCCACTTGAATGTTGGAAC
CATCGGCCACGCGGATCATGGAAAGACCACGCTTACTGCTGCCATATGCA
CAACACTGGCTAAACGGTATGGTGGCCAGGCAAGAGACTTTGATTCCATT
GATAACTCTCCCGAAGAAAGAGCTCGAGGAATAACCATCAACACTGCACA
TGTAGACTACAACACTCCAACAAGGCATTATGCTCATATTGACTGTCCGG
GACACGAAGACTACGTCAAGAACATGATCACTGGCGCAGCAAAGATGAAC
GGGGCTATTCTGGTTGTATCCGCTGCGGACGGACCCATGCCGCAGACCAG
GGAACACATCCTACTGGCCAGACAGGTGGGCGTTCCGTACATAGTGGTGT
TCATGAATATGTGTGACATGGTGGACGATGAAGAACAACTGAAGCTGGTG
GAGATGGAAGTTAGGGAACTTCTCAGCGATTATGACTTCCCTGGGGACAG
CCTCCCGGTCATACAAGGATCTGCATTAAAAGCCCTTGAGGGTGTGCAAG
AGTGGGAGGAGAAGATCGTTGAGCTGGCGGCGGCTCTTGACCGCTACATC
CCTGAACCTGAGCGGGCGGTAGACAAACCGTTCCTGATGCCAGTCGAGGA
CGTCTTCTCCATCCAAGGTCGCGGCACAGTTGCGACAGGCAGGATTGAAC
GTGGGATCATCAAAGTTGGAGAAGAAGTGGAAATAGTTGGGATCAAGGAA
ACAACTTCAACGGTTTGCACAGGTGTTGAGATGTTTCGCAAACTGCTGGA
CGAAGGCAGGGCTGGTGAAAACGTCGGTGTTCTGCTGAGAGGTACGAAAA
GGGATGAAGTGGAACGAGGTCAGGTGTTGGCCAAGCCTGGAAGCATCACT
CCTCATACCAAATTTGAAGCTGAGGTGTACGTTCTGAGTAAAAAGGAAGG
CGGACGTCATACGCCGTTTTTCAAAGGATACCGACCTCAGTTCTATTTCC
GGACCACGGACGTCACAGGAGACATTTCGCTTCCCGAGGGGGTGGAAATG
GTGATGCCGGGAGATAACGTCCCGATGACTGTAGAGCTGATCGCCCCCAT
CGCCATGGAAAAAGGCCTGCGGTTCGCCGTCCGTGAGGGGGGCCGGACAG
TCGGTGTCGGGACCGTGGCTAAGATATTCGACTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00977.0-exon-Sc0000003-1570713199:6046619..6046659 | Blg00977.0-exon-Sc0000003-1570713199:6046619..6046659 | Branchiostoma lanceolatum | exon |
| Blg00977.0-exon-Sc0000003-1570713199:6045904..6045925 | Blg00977.0-exon-Sc0000003-1570713199:6045904..6045925 | Branchiostoma lanceolatum | exon |
| Blg00977.0-exon-Sc0000003-1570713199:6044333..6044429 | Blg00977.0-exon-Sc0000003-1570713199:6044333..6044429 | Branchiostoma lanceolatum | exon |
| Blg00977.0-exon-Sc0000003-1570713199:6043888..6044051 | Blg00977.0-exon-Sc0000003-1570713199:6043888..6044051 | Branchiostoma lanceolatum | exon |
| Blg00977.0-exon-Sc0000003-1570713199:6043391..6043495 | Blg00977.0-exon-Sc0000003-1570713199:6043391..6043495 | Branchiostoma lanceolatum | exon |
| Blg00977.0-exon-Sc0000003-1570713199:6043121..6043162 | Blg00977.0-exon-Sc0000003-1570713199:6043121..6043162 | Branchiostoma lanceolatum | exon |
| Blg00977.0-exon-Sc0000003-1570713199:6042946..6043068 | Blg00977.0-exon-Sc0000003-1570713199:6042946..6043068 | Branchiostoma lanceolatum | exon |
| Blg00977.0-exon-Sc0000003-1570713199:6042520..6042646 | Blg00977.0-exon-Sc0000003-1570713199:6042520..6042646 | Branchiostoma lanceolatum | exon |
| Blg00977.0-exon-Sc0000003-1570713199:6041999..6042103 | Blg00977.0-exon-Sc0000003-1570713199:6041999..6042103 | Branchiostoma lanceolatum | exon |
| Blg00977.0-exon-Sc0000003-1570713199:6041553..6041704 | Blg00977.0-exon-Sc0000003-1570713199:6041553..6041704 | Branchiostoma lanceolatum | exon |
| Blg00977.0-exon-Sc0000003-1570713199:6040970..6041089 | Blg00977.0-exon-Sc0000003-1570713199:6040970..6041089 | Branchiostoma lanceolatum | exon |
| Blg00977.0-exon-Sc0000003-1570713199:6040216..6040364 | Blg00977.0-exon-Sc0000003-1570713199:6040216..6040364 | Branchiostoma lanceolatum | exon |
| Blg00977.0-exon-Sc0000003-1570713199:6038646..6039670 | Blg00977.0-exon-Sc0000003-1570713199:6038646..6039670 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:6038646..6046659 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00977 |
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