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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:7044457..7050558- Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00985.0 ID=Blg00985.0|Name=Blg00985.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6102bp|location=Sequence derived from alignment at Sc0000003:7044457..7050558- (Branchiostoma lanceolatum)
ATGATGACGCCAGGGGATGTAGACAGTTTTGAACTGACAGATCTGGTTCC
TGGCACTCAGTATGACATCAGCTTGGTGGCCGTTAGCAGTGTGGGGAAGA
GCATCGCCATCGGTATAAGTGTTGTAACAGGTAAGTGATAGATGGTCATT
AGTACAGCATTAGTTGGAATACTGGGGCCATGAAATTACAATGTGTTTGA
AGTATTATTTATTACCTGGATGTCTACACTTCATCAACGTGTAAATATCC
TTGAGAACAAAATCTGTATATTTTCTTTAATATTTTAGATATCTAATATT
TCAAGCTCAGACTTGTTCTGTTGTTTCTGGTTGGACTTAATTTTCACTGT
TTAATATAATAGGATTGGAATATTGGATGGTTTACCTCGTCTATGACTTT
CAACTTTGTCTGTGCTCTAGATCTGCTGGTAGTGAATTGTATACTTTTAT
ATTAAATACCATGTATATAACTTGCATATTGTATCTTTAGGCACAGATCC
TCCCTCCAGTCTAAGAGTCACCAAGTCCTCCATGACATGGATGTTCCTGG
AATGGACGCCACCTGTGGCAAACATTCTGTCCTACGACTTGGATGTTTCA
GACGAATATGGCGGAGAAGGAACATTGCTGAGGTAAAATAAGTGTTGCAA
ACATCTTGTAATGTCTTCGCAACAATTTTCAAAAACGATGTGTCATGTAA
ACATTATAATAGCTCATAATATCCAGTGAGTTGAACGTGTGCAGGAATGC
CCCATTTTGAAATCAAGTTTGTCTTGCTAATTTTCTTTGAGTCGATCACA
TGTTGATTCAGATGTAGCAAGTTAAACAATAAGCGCCAAACGATTATTAG
CGTATTTACTAGTATGCGGAATGCATTTCTTCTTTTAGAATATTTGCAAC
ATCTTTGTAGACATATGTAGAATAGACTTGTCTCTGATAAATATCTCAAA
GTACGTTATGCCATAATTTGAACCTTTAACAAATGCTTTCCAACATTTGT
TTATCTTTATATCAAATATTTTAAAACAGGCTTGGTGGACACGAAACGTC
CTACAACATCACAGGTCTTGTACCAGAAACCACATACGTCATCAAGATGG
CGGCCTACAGCGAGCATGGTCGTAGTGTGGACAGTACTTATTCAAATATT
ACAGGTATAGTGCATGTTTTTGTTTCAGATACGGAGACATTGTGTATTAT
CATAAGCATCTTAAGAGAATTAGTTTCCCATACATTAATTTCAATAGGAA
CTATCATTATTATGGACAGTTTATCCAGCTGTTTGACCTTGCAATTCATG
TTCCAAAGAATTGTTTTTATACTTAAGTGAATTTTATGCTGAACTTTGAT
TTACATTGATGCTTTAATTAGGTTAATTATTGTACGATTGAGTGTCACAT
AAATACATAACTATCCTTTGCCCATATAGGGTCTTTGTCATCAATGGAGG
TCAGCACTGTTGAATCGTCACAAACAACGACGATAGCTTCCACAGCGGAT
AGAGTGATAACTACTCCAACAGCCACTTCTCCGTTTTGGACAGAGTCGAC
AACAGCACAGAATATCGAAGGTACAATATGTATAAAAATATAAATGTTAA
GTTAACAGTACATACAAATTGATTTTGTATAACTGTCATTTCGCAATTGA
CTGTCACACGTAACTACGATGTCAGCAAAAACTATCGGTGAGTTCCGGAC
GTAAAGAATATGCAAAATTCGCGTGAAGTTCTACGTCGTAAAAAGGTTAA
GTGATCATCAGTATTTATGTCTTCGAATATATTGTTCGGGAAAACAAATC
TTTATTTTTTTCTGCAAATATTTTAGTAGATCATTGACAAAACATTCAGT
AGTTGTTTGAAAACTTAAAATTTAGATTCTTAACGGAAAATTGGAAACTT
GGAGATGCCCTTATGATCGATACGCAGTGAATTACAAATGTCCAAGTAGC
AAATGAAGAAATAATTGTACACTGTTTACTTGCGTCCTGACAGCTATGTT
TATTTCACAAATTTGTAGCAACCTCTTCAAAAGCAATAAAATCAACGACT
GTCTTGGCTGGCGACACAACAGCAGCCCATCGGACAACTGAAAACTATAG
TAAGATTGTTCAACAGTGTTATCTACTTACTTTTGGAATACGTACACATC
CCTAATTGCTTGTGGATACGTTATAAGCTTCTGACAAAGATGATTTATCG
TGAATAGTACACAAAATTACATACGGTATTATTTGTTCACAGGTCCATTA
ACAGGGAAATCAACGAAGCCTCCCCGTATCCCACAGACATCGCGGGCTGG
TAAGTGTTTCTTTTAGGGGTTCTTGTAATTTGTTTACAATATGTTTTCAG
AAAACAGGCGATCTGCTGTTTCACAAACGTATGTGTGTTGCCACAATTTT
AACATATTAAAGTGATTGAATAGAGACAAACAATATCTGAGTATGTTTCA
GACATTAAAGAACATACAACATCTCCCAAACGGACTACGGAAGACCCAGG
TGAAAAGGTACGACGCCTTTTGAACATTACTACCCGATGTTTTCACGTCT
TAACGATGTTTTCGCATCTTATCAACATCTGCGTCCAAAGTAAATTTAAT
TTTTTTTATGCAGCAATATTTCTCTCACCTCTGTATGGGCTGGCAAAATG
TCAAAATACTCTATTACTGATACTATATTCCCTTGAATACTTGATAGCTC
AAGCAGCTCGCACAAGGCCTGGAACAAAGTTTACCAGAAGTAATGGGACC
AGAGGACATTCTTGCAGTGACGTCCAACATCAACGAGATCATCAAACCTG
GTGATGGCTTTGAGTCAGATATACCACTCTCAGTGTTGGTGAGCTTAGCT
CTACTTTGTCTCGAATGATCTGTAATTGTATCCATGGTAGTAAGAAACTT
ACGCTATTCCTAAAGAGGAATGCGCCGACCTCTTCATTGTGAAAGCTTTT
CTTTTCATTTACTTTGTATCTTTTCTGGACAGCAAACTACTGCAGGGATC
ATCGAGAAGCTCGCTTCTGCCGCTAGAGGCTCACAAGACATGTCTATAGA
AAACATGGAGGCCATAGCCAACGGTGAGGAGTTTTTTTATGTTACATGTA
GCTGTACAGAAATGCTCATACTGGAGTAAAGCTCATTCAAAGACTTGATG
CCTTTACTTTATTTTACATCATCTCACCATTGTTGCTTAACAGTATCTAT
TAATGTTTTGCTGTTAATAAAAGAACATTGCGACTCGACTCCACTCCACC
CCACTCTACTCAATTGATTTTCTTCTCTTTGTTTTCCAGCCTTGTTGCAG
GCGACTTCAGCAGTTATTGATGTGCTACCCAAACAGAAAACACAGACTGA
CAGTAACTCCGACAATGTGTTTGAAAGTGATCTTATCGACACGAGTTCCA
CTGACCTCTCCCCCAAGCAGCAGCTAAAGATGTTAAAAGAGAAGGAGAAG
GAAAAAGAAGACATGGTAAGAATTCAAATGACAGGTGAAGTTGCGTAATA
AACACGGATTGTGATATCATAACATTGCACCGAGATTAAATCTCTTACTA
CGAGATTGAAATTGTCTTTTTTTCACCATTTACCTTGTATGTCTTTCTAT
CTAATTCAGCAACGAAAAGCGTCGCAGTCTATTGTGGCATCTTTGGACCA
GGTTGCTGAAACACTGCTGGCGTTGCAACCCGAGGATGTAGAGTATCACT
CAAGTTTTAAAACAGAAAGCGTCGCTGTCGATGTGGCGAGGTTTCCCTCT
GACGAAGAATTTCTCCTCGACTCAGGGGATATTGTGGCAAATATCCCGCC
AACACCTGGGTCTAAGACACGTGACATGCTGGATGTCAAGGTAAGAAAGA
CACAAGTCACATTACCTTTTTTCATTATTCTAGTATGTTGTAAAATCGTT
GAAAATAAAGTGATATGCATGCGTGAGCCCTTACTGCTCAACAAATGATC
AAGCTACTTTATGTCTGGGGATAATCGACCTTACATTGTTTAGAAATTCT
CAACAATGAATTGTTGCATTGTGGGTTACAGATGTCAGTGTTCAAGAAGA
ACCCATATTCCTGGAGCAAATCGACAGGAGGACAAAACATCTCATCAGTG
ACGTTTCTGACCATCAATTCAAAGGGCTCCGGAAACGAAAGCAAAGAACA
AAAAGTAAAGCTGGATATGCCATTTGTACCGCCCCAAGAGAGAGGACAGT
CAGCTGGCCGGCCGTCATATGTAGCGACAGAAAGACCGAGCGCGACAGAA
GATGACACCAACGGTACAACTATGGCGTACCACGCCTTCAATGTTCAGTA
CGATAACGTCATCCCTGTTGTCCGTATGAAATGGTGGGATGTAGAAGCGA
CATTTCACGTCTACATCTCGTACGGATCGCCTCCGACTGAAGAAAAGTAT
GACGAGAAAAGAGTTGTCAAGGAGACTGGATATGAAGCCTGGCTCCATTG
GACAAATTTTTCAGCATCCTTCACTCCCAACACGACTAACCATGGCGGAC
GGATTCTGTATGTTGGCGTACAGAAGTTAGGTGTGTTTTAGACATGAAAC
ATGCTTTATCCATGTTGTTCGTTTATATACAATTGATAATTCAACTTGTA
GCAATGGTGATAATTCTATATACATATACAATTCCCAGGATCGGTCAGCT
CTGCCCAAGGCCATCAACAGCAGCCTACCGTGCAGATCCTGAGCAAGGAT
GACTACACACTGTCGATATCAGCTGTAGGCTGCTCCTCTTGGAAGGATAG
TGAGGAGCAATGGAAGCTGGAGGGCTGTGACGTGAGAACATTTATGGCTA
TTATCACCTACGTACCTAATTAGGCCTACATTGACCTTACTTGGTCGGCG
GGGGGGTGCAAAGTTGGTCACTTGCTGCCAGGCGTCTAATTAAAGACGGC
AAAAGACTGCTAGCAAGCTTAGGCATTCCTACTCGTTACCTTCTGTGCCT
GATCGCACTTGGCTTGCTTTAGTATCCTGTCTCAGAGGCTTATATTACAT
GATGTTAAAGTCTACATATGGAGACTGCATCATTGCAATAAAAGAAAAAT
ACATATAAGAACAAAAAAGGAACAACTTCTGGGAGCAATCTGAAAGAAAA
ATTAGAAAGAAGCAAAAGCAAGAAGCAGGCAATGAGACGATGTACTTTGA
CCCTGAAAACACTATCATAATGTAGGAACACAAACGATAGAGGTTGCCAT
TACTTTTTCTGTACTGTTGAGATACATAACACGGATTCCTGCCTCACTCA
TTTTCATCGTGTAACCTTGAACCCACGACAGGCTGACATTGATCTGGACC
ATGGGACCATCAGCTGCCGGTGTCACATGACGGAGAGGAAGGTCTCTGTG
GGGACCATGACTCTTCCACTTCCCAACTCCATCAACTTCATCAACGCGTT
CAAGAACTTCCGCAATCTGAGCGAAAACTCCGTAGTGTTCTCCATCGTGG
TGTCCGAGTACATTCTGTACATCCTAATCATGGTTGTCCTGTGCGTGGAC
TTTCATCATGTATGGGTAAGCTTAAAGTTGGTCAATTCTAGATCTTCAGC
AATCTTCCATGATCCAACGGTTGTTACGCTTTTCGTTGCACAAGTCATCT
TACCCTTAACTTGTAAGAAATACCAAAAATCTGAAATATACCAAGCAAAT
GCATCAGTTGGACATGAGGAACTGGTAGTTCTGTATTTGTAAGTGTATAC
GGTGCAAATCATTTGATTGTATTTTGTTGACCTTTTAGGTCAATGTCAAT
CTTTCTTACTTAAGGGTATTGATAAAAACAAATTAACGTAGCTGAATGAA
CTCAGGGATGAGAGTTTTTCTTACATCCTCAGATGACTCTTCGTCGTCGT
TTCACCTCCCGGATAAGCCCCATTTCTGGACAGAGTGGAGAAGATAACAA
TCAAAGAAAGCCGCTGGACAAAGTGACACTGCTCCCTCCTGACAGGATGC
CTGCACCTCACGTCTATCAAATCACGGTCACCACCGGGTCCATGTTCGGG
GCAGGGACCACGTCACGGGTCGGCTTCCAACTCTTCGGGTCAGAGGGCAC
ATCTCCAGTCAAGATGCTGAACCCAGAAGGAGAGGTCGGTGTTGTAGCTT
AA Coding sequence (CDS) from alignment at Sc0000003:7044457..7050558- >Blg00985.0 ID=Blg00985.0|Name=Blg00985.0|organism=Branchiostoma lanceolatum|type=CDS|length=2190bp|location=Sequence derived from alignment at Sc0000003:7044457..7050558- (Branchiostoma lanceolatum)
ATGATGACGCCAGGGGATGTAGACAGTTTTGAACTGACAGATCTGGTTCC
TGGCACTCAGTATGACATCAGCTTGGTGGCCGTTAGCAGTGTGGGGAAGA
GCATCGCCATCGGTATAAGTGTTGTAACAGGCACAGATCCTCCCTCCAGT
CTAAGAGTCACCAAGTCCTCCATGACATGGATGTTCCTGGAATGGACGCC
ACCTGTGGCAAACATTCTGTCCTACGACTTGGATGTTTCAGACGAATATG
GCGGAGAAGGAACATTGCTGAGGGTCTTTGTCATCAATGGAGGTCCATTA
ACAGGGAAATCAACGAAGCCTCCCCGTATCCCACAGACATCGCGGGCTGA
CATTAAAGAACATACAACATCTCCCAAACGGACTACGGAAGACCCAGGTG
AAAAGCTCAAGCAGCTCGCACAAGGCCTGGAACAAAGTTTACCAGAAGTA
ATGGGACCAGAGGACATTCTTGCAGTGACGTCCAACATCAACGAGATCAT
CAAACCTGGTGATGGCTTTGAGTCAGATATACCACTCTCAGTGTTGCAAA
CTACTGCAGGGATCATCGAGAAGCTCGCTTCTGCCGCTAGAGGCTCACAA
GACATGTCTATAGAAAACATGGAGGCCATAGCCAACGCCTTGTTGCAGGC
GACTTCAGCAGTTATTGATGTGCTACCCAAACAGAAAACACAGACTGACA
GTAACTCCGACAATGTGTTTGAAAGTGATCTTATCGACACGAGTTCCACT
GACCTCTCCCCCAAGCAGCAGCTAAAGATGTTAAAAGAGAAGGAGAAGGA
AAAAGAAGACATGCAACGAAAAGCGTCGCAGTCTATTGTGGCATCTTTGG
ACCAGGTTGCTGAAACACTGCTGGCGTTGCAACCCGAGGATGTAGAGTAT
CACTCAAGTTTTAAAACAGAAAGCGTCGCTGTCGATGTGGCGAGGTTTCC
CTCTGACGAAGAATTTCTCCTCGACTCAGGGGATATTGTGGCAAATATCC
CGCCAACACCTGGGTCTAAGACACGTGACATGCTGGATGTCAAGATGTCA
GTGTTCAAGAAGAACCCATATTCCTGGAGCAAATCGACAGGAGGACAAAA
CATCTCATCAGTGACGTTTCTGACCATCAATTCAAAGGGCTCCGGAAACG
AAAGCAAAGAACAAAAAGTAAAGCTGGATATGCCATTTGTACCGCCCCAA
GAGAGAGGACAGTCAGCTGGCCGGCCGTCATATGTAGCGACAGAAAGACC
GAGCGCGACAGAAGATGACACCAACGGTACAACTATGGCGTACCACGCCT
TCAATGTTCAGTACGATAACGTCATCCCTGTTGTCCGTATGAAATGGTGG
GATGTAGAAGCGACATTTCACGTCTACATCTCGTACGGATCGCCTCCGAC
TGAAGAAAAGTATGACGAGAAAAGAGTTGTCAAGGAGACTGGATATGAAG
CCTGGCTCCATTGGACAAATTTTTCAGCATCCTTCACTCCCAACACGACT
AACCATGGCGGACGGATTCTGTATGTTGGCGTACAGAAGTTAGGATCGGT
CAGCTCTGCCCAAGGCCATCAACAGCAGCCTACCGTGCAGATCCTGAGCA
AGGATGACTACACACTGTCGATATCAGCTGTAGGCTGCTCCTCTTGGAAG
GATAGTGAGGAGCAATGGAAGCTGGAGGGCTGTGACGCTGACATTGATCT
GGACCATGGGACCATCAGCTGCCGGTGTCACATGACGGAGAGGAAGGTCT
CTGTGGGGACCATGACTCTTCCACTTCCCAACTCCATCAACTTCATCAAC
GCGTTCAAGAACTTCCGCAATCTGAGCGAAAACTCCGTAGTGTTCTCCAT
CGTGGTGTCCGAGTACATTCTGTACATCCTAATCATGGTTGTCCTGTGCG
TGGACTTTCATCATGTATGGATGACTCTTCGTCGTCGTTTCACCTCCCGG
ATAAGCCCCATTTCTGGACAGAGTGGAGAAGATAACAATCAAAGAAAGCC
GCTGGACAAAGTGACACTGCTCCCTCCTGACAGGATGCCTGCACCTCACG
TCTATCAAATCACGGTCACCACCGGGTCCATGTTCGGGGCAGGGACCACG
TCACGGGTCGGCTTCCAACTCTTCGGGTCAGAGGGCACATCTCCAGTCAA
GATGCTGAACCCAGAAGGAGAGGTCGGTGTTGTAGCTTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00985.0-exon-Sc0000003-1570713199:7050429..7050558 | Blg00985.0-exon-Sc0000003-1570713199:7050429..7050558 | Branchiostoma lanceolatum | exon |
| Blg00985.0-exon-Sc0000003-1570713199:7049927..7050068 | Blg00985.0-exon-Sc0000003-1570713199:7049927..7050068 | Branchiostoma lanceolatum | exon |
| Blg00985.0-exon-Sc0000003-1570713199:7049110..7049129 | Blg00985.0-exon-Sc0000003-1570713199:7049110..7049129 | Branchiostoma lanceolatum | exon |
| Blg00985.0-exon-Sc0000003-1570713199:7048260..7048316 | Blg00985.0-exon-Sc0000003-1570713199:7048260..7048316 | Branchiostoma lanceolatum | exon |
| Blg00985.0-exon-Sc0000003-1570713199:7048052..7048107 | Blg00985.0-exon-Sc0000003-1570713199:7048052..7048107 | Branchiostoma lanceolatum | exon |
| Blg00985.0-exon-Sc0000003-1570713199:7047721..7047861 | Blg00985.0-exon-Sc0000003-1570713199:7047721..7047861 | Branchiostoma lanceolatum | exon |
| Blg00985.0-exon-Sc0000003-1570713199:7047486..7047576 | Blg00985.0-exon-Sc0000003-1570713199:7047486..7047576 | Branchiostoma lanceolatum | exon |
| Blg00985.0-exon-Sc0000003-1570713199:7047094..7047269 | Blg00985.0-exon-Sc0000003-1570713199:7047094..7047269 | Branchiostoma lanceolatum | exon |
| Blg00985.0-exon-Sc0000003-1570713199:7046719..7046949 | Blg00985.0-exon-Sc0000003-1570713199:7046719..7046949 | Branchiostoma lanceolatum | exon |
| Blg00985.0-exon-Sc0000003-1570713199:7046029..7046527 | Blg00985.0-exon-Sc0000003-1570713199:7046029..7046527 | Branchiostoma lanceolatum | exon |
| Blg00985.0-exon-Sc0000003-1570713199:7045778..7045920 | Blg00985.0-exon-Sc0000003-1570713199:7045778..7045920 | Branchiostoma lanceolatum | exon |
| Blg00985.0-exon-Sc0000003-1570713199:7045044..7045277 | Blg00985.0-exon-Sc0000003-1570713199:7045044..7045277 | Branchiostoma lanceolatum | exon |
| Blg00985.0-exon-Sc0000003-1570713199:7044457..7044726 | Blg00985.0-exon-Sc0000003-1570713199:7044457..7044726 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:7044457..7050558 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00985 |
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