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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:5088504..5096606+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00986.2 ID=Blg00986.2|Name=Blg00986.2|organism=Branchiostoma lanceolatum|type=mRNA|length=8103bp|location=Sequence derived from alignment at Sc0000003:5088504..5096606+ (Branchiostoma lanceolatum)
CTAGTTACGTTTTCATGTGAACATTAGAAACTTTGTTTCGACATATACCT
TATCATGTTACATAAGAAAATGTTAAATAAAAAAAAGACAGAGATCAAAC
GGAAAGAGTGGTAAAAGGTATATCTTAGTTTATTTGACTTCAAGAATTTT
TCATTAGTCAAAAAGCGTTTGGTGCGCGCATCGCTACACGCCGGTGCAAA
GAAAAGTCTAGAACCATCTACCAGCACCGTTACCAGCTAGCAAAATGGTA
CGTTTGAAGAAGTATTTGCAACATTCCTCACTACAAGATCCTTAAGTTGT
TCCTAGTGCATGGCTCTGTGTCCCCAGATTTTGAGATTATTGGGATTCTA
CTCTATTTTTCCGTGTGAAGCTAAGTGCACTGCACGTGGGATTTCTGCAT
GTCTTTCTCTGATGTCATGGTGTGCCCCCCCTCCCCATCACCTTTTCTCT
TCTGTAAAATCATTATGTGCCGACTTTTCTTCACATTTCCCATCTCTTGA
TTATGTTCCTATGCATAGGTAAAAGCTGTCCAAATTTGGGCACAAACATT
ATGGTACTAAAGATATGCAAACAATTATGTCTTTGTACTGTGAATTTGTT
TAAGTTTGCAGTAATTAGATTCTAGGCAAGGTGAAAATCCAGATTTAGCG
GTGTCTTTGAGTTTGCAGTTAAAACAGCTGTAGTAACGGAAATTATGCTA
GAGAGAGCATGTTCACCGTGTGCCCACCACAAGTATTTCACAATTTACAG
TAGTAAGGCATGTAAATTTGTTCGATTGAAACTTCGAATTCTCAGACTCA
GATCTTCCTTGACACAACTTAAAGCATTTAACCAGGGTTTAATGTAATCC
ACAAGATTCATGTATGCTGGACACAAAATGGACATTTCGGATGGTGACTT
AAAGCTGGCGGCCCGTGTATGAGGGAGCTTCGGGCATAAGCCTCAAGCGT
CAAACCTCTGCACATAAACGGACCCAACACACTTATCGTGAAGAGTAGGG
GTGTCTCTTAGGTGACCCGGTGTGCTTAGCCTTGGTAAAAAACGCAAGCC
GTGGCAAAGAGGCATTGCACTACCACTAGCTACTTGAAAAAGCATCATGC
TTCCCCCAATTGAGGATGACTGCTTTACCTTTTTACAATTCTCTACAAGA
CATTTTTTTGTGGCCCTTTTTTCCAGGCGGGAATGGCGCTGAACCCCATC
CAGATCCTGAAGCAGCAGGCGGAGGAGGAGCGCGGCGAGACCGCTCGTCT
GTCGTCCTTCGTCGGCGCCATCGCTATCGGCGATCTCATCAAGAGTACAC
TGGGACCAAAAGGCATGGTGCGTTGCATGGACGGAGTTATTTTCAAGATG
ACTTAGCCTCTGTTGCTGACTTTGCAGCCCTTTCTTGTTAACTATGCACA
TTTTTCTGATGCTAGTGATAGCTACAGGGATCTGATTGCTTGCCATCTCT
GATTAAGAATCATTTGATTCATAGAGAAACATGAAAATTGGTTATGAAAA
TAATGTTCTTATTCATATTCATCCAGCAAAATAGTAGTAAAATAAAGGTT
TACTACTACTACTACTAGCATGAGAGGAAAATATCAACCTGTCCTTGATA
TTGAGATGCATACTTACAGTCCCTGCTTAGTTCAATTGGTCAAAATTAAT
CTCCAAGTACATGTAGATCTATCAGTGGCAAGGCAGTATCAAAAAGGCCA
ACCAGTGGTCTTGGATAATCGTTGGCCCTTTTGATACTGTCCTGCCACCA
ATAGATCTGCTTGGAGATTAGTTTAAACAAGAAAACTAGATTGCTTACTT
ATGTTCCCTTTTGTCTTGTTTTAGGACAAGATTCTTCAGTCCTCCAACCC
TGCCCATGAGAACATTCAGGTGACCAATGACGGAGCTACAATCCTGAAGT
CTATAGGTGTGGACAACCCTGCAGCAAAGGTGCTCGTAGGTGAGTTCCAC
AAACAGCCTTTCTGGCAATGCCTCATGGATGGTAAGATGTTTTGTTGTGG
CATTGAAAGGCCAAATAGCTAGGCTAGCAGACATGAGATTGAGAGTTCCC
AGGTATGATTCGTGGCATTCCTGGTTAGACGTCATGTCCCTGGGAAAGGC
ACTTAACTTGATTTTCCTCACTCCTGACTTCGGTGAGGAGGTAAAAGGCA
GTGAAAGTAGAGGGAGGGCCAGATAGGCACCCCTTTCCAATACCGCTCAC
TAGACCCACTGCCACTACAGCCTTAAAAAGGCAATGGGACCTTTATCTTT
ACCATGGGTAGAGTTTATAGAGCCTTATTAATTAGACAGTGAGAGAGTAA
GTGTTACATGGAGTCCCTTCCTGCACAACCGTGCCTTACTGTAATCACTC
CTACAGGGTTGGGTTCAGCCCAGCCTGGTAGTGTGAACATGTCAGTGTAG
GTGGTGCAAAGGAAGGAGAGAAACTGTCCAGTCGCTCCAGACATGGGAAC
GAGGACCTCTTTCTTAATGTCCACTGACTGTACCTGTCTGGAGAAGGCAC
AGATTTTCATTCCCTTTTAAGAACCCAGCACACTTATCAAGAAGAGTAGG
GGTGACCCTCAGGGCCTGTGTGCTTGGCTAAAAACACCAGCCGTATGCTT
TGAAGTACTGCTAGCTACTTGAAAAAGCAATACGCTCCAACTCAATTGAG
GATGACTGCTTTATTTCTTACTTTGTACCCTTATCACTTGAAATCTTCTG
TCTTCTCCAGAAATTTCCAAGGTCCAAGACGATGAGGTTGGTGACGGGAC
CACGTCCGTGACCGTGCTTGCCTGCGAGCTTCTTAAGGAAGCGGAGAAAC
TGGTCTCACAGAAGATCCATCCGCAAACGATAGTCGCTGGATTTCGCCGG
GCTACGGACGTCGCTAGGGCAGCACTACAAGATGCTTCAATAGACCATGG
GTCAGTCAGAGAAATGATCTTTTAGCTTGATATATGTTTGGAGAGTTGAC
AGGGTTTCTTCTAACCAAGGGTGCTACACCCTTTTAGTTTCAGCACACCC
TCTAACCCTTGGAGTAGCTTTTGCCAAAACAAAAGTGGAAAATTCAGATT
GACCAGTACTGACCATACCAGACTATATGTGACCACAGTCTTCAACTGTA
ACTTGTCTGACCATAGGTTTGCCCTAATGAAGCCTTAGAATTTGCCATTT
TCATATCGAATTCATTAAAACTCAGCAGTATTCCCCCAGCTTGGTTGCTT
TACTCTCTTGCATTGTTCTTATAGTCAATTGTTTCTTGGTTAATTTATTA
TGAAGTAATTTCATAGAAAATACAGTATGTCTCTAATTTGTTCATCATAG
TTGTGATATCAGTGTTTTCTAATAATTAACCTTTCATCTCTAGGAATGAA
CCCGACAAGTTCCGTGAGGACCTTATGAACATCGCCCGTACTACCCTCGG
CTCCAAGATCCTGACTCAGTACAAGGAACACTTCTCCAAGTTATCTGTGG
ATGCTGTTCTTAGACTTAAGGTAGGTTAGATCTTCTTCAAAATGTCTGTT
CTTATTTCTACTAATACTATGTGAATAGCTTAAGCCCCGGTCTCATAGAA
CTGACCATGGCCTCCCAATCTTCTCCAGTCCATGGTTTGGAGTAGAGCCC
CTGTCAAACATAGGCGACCATGGCTTCCTGACCTTCTCCAGACTATGATT
GGGAGTTAATCGTGAGCACAGTCATCTGTGGTTGGGAGTTGGTTGGCTCA
AGTTCTTCTAGATGTCTGCGCCACCCGACAATGAATTCTGAAAACTCAGG
AAAGTCATATTCTGTTCTGATGCGATCAGAGGAGCAAACTGGAGCTAGAA
TAGGATGGATTTCAGGCTACCCCCAACCCAGCACTAACCTTGGTTGGAGA
GTGGTCAGGAGCAAAGAAGTGGGAAGGTCCTGAATGTGTGATAGTGTTAA
GCCAGTTGTTGGGTAATTAGAATTACATATGAAAAAGTTCTGTACGAGTG
TGTTTTTGATGACATTTTGTTTTGTCTGTTTTCAGGGTTCCACATCTCTT
GATGCCATTAAGATCATCAAGATCCCCGGTGGTGGATTGGTTGACTCATA
CCTTGATGAAGGTGAGAATATTTATGTTTTTTGTGTCCTTTGATCCACTG
AAAGGGATGTCCCTGTAGCTCAACTGGTAGCAGCCTCACAGTTGAGCCCC
TAGTTCCAATTAGTTGCAAACTGGGAGACCCTGGTTCAAATCCTGGGAAG
GACATCTCAGTTGGGGCTGCACCCGTCTATCAGAAGAGATGTAAAATGGG
GGGTCCCGTGTTCAAGCATGTTCAAGGGGAAGGGCTTGCAACTGTGGGCA
GTGGGCCTGTAACTAGTGTAAGACTTAAGCATACCCTGTTACTGCAACAG
CAAGGAAACAGGCTGACCTATGTGCCACTAGCTTGTTCCACTGAAATCCA
ACAAACAGTCCTTTCCTGCACAACCGTGTTTTACTGTAATCATGTAAAAG
GTATACGTAGCAAATTTCCTAAGGCAGCAGACCTAAATTCGAGGGGAGCC
ACAGCTTGAGCTACAAAGAACCCAACACACTTATCCATAAAACTTAAATA
AACTACCGGTAAAACCAAAGCAAACGATCNGAGTTAATGTCACACGGACT
ACCTTCCTGCACAACCGTGCCTTACTGTAATCACTCCTACAGGGTTGGGT
TCAGCCCAGCCTGGTAGTGTGAACATGTCAGTGTAGGTGGTGCAAAGGAA
GGAGAGAAACTGTCCAGTCGCTCCAGACATGGGAACGAGGACCTCTTTCT
TAATGTCCACTGACTGTACCTGTCTGGAGAAGGCACAGATTTTATTTAAA
TCTAGACCCTGTGGAGTATTTGCTTAAGAAATGCTAGATTTCCAAAATAG
AGATACAGCTACAGTGAAAGCTGAAATACATTTTTACGATGCATTTGGTA
TATCTGCAAATTGATCTATTTGCTAGTATGGTGGTAATGTAAAAAGGTAC
AAAATTGGTAGTGAAATTCCTTGGCAATCCATCGCAATTTCGCAAATCAT
TTCACTCTACAACAGAATCTTTTCAACCATGAAGTTGAAACACAGGGAAG
TTCTTCTTTCCCCTTCTACTGGCTGTGAAAGAAAGTTTCTGTGATTCAGT
ATGTGAAAATAAATGCACGTACAACTTACACTTCTGTTGATGTTTTTCCC
ATTCCAGGGTTCCTGTTACAGAAGAAGCCTGGTGTGAACCAACCCAAACG
GATAGAGAACGCACGAATCCTCATCGGTAACACCTCCATGGATGCCGACA
AGATCAAGGTTAGACTCTTAGTCAAGTCAAGTCAAAATTTATTGCACAAC
GATTATAACAGGTACAATGTATGGCAAAATACTACTGGCTACTTATATTA
AACTAGTACAAACTGCAGGTTCTAGGCTCTTATACCCTTTGAAATGTCAT
TCGTATTATCGTTGAGTCTATGTTTTCTTTTAACATTTGGAAGTTGGAGT
TTATACGTAACTTTGATATTGGTTGATATAGTGTAACTGTAAATGCAGAA
ATGTTCGTGGTGGCTTGATGTTCGCAGTTTTCTTGGTGACTGTTTCTTCA
GTTTATCTGCCAATCTTTATTTCTGAACTCGCAACAGTTCCTCTTTTACA
GATTCAAACTTGTATTATCTGTCTTTAGGTGTTTGGTTCTCGCGTGCGTG
TGGACTCAGTCGCTAAGGTTGCTGAACTTGAGCTGGCAGAGAAGGAGAAG
ATGAAGGAGAAAGTCGGTCGGATCCTCAAGCACAACATTAACGTCTTCAT
CAATAGGTCAGTCACAAGACAAGTTTGTTTTCGATCCCAATCTTTGATGA
CATTTGTCAGTAGAGATTTCAATCTGGTTGATTTGTCAATGCTGTTGGTA
GAGATGCTGATTGGAGTCTGTAATGTATTCCCTAAAAGGCAGTCAGAACT
TTTCAACATCGATTCATTTCACTGTAGATCAATGGATTGACCTGCAATTT
AGGATTTATAAACGGGAGATACTCAAACACATTCTTAGCATCCTGAATAG
CTAGCTGCCCTAGCATCCGAAATCTTTGGGATCTGTACCAGCAGAATCAT
CTTTTCTGCAAAATCGCAGTCTCTACCCTGACAAATATAACATTTGCTGT
TTGTTCATGTACTATGGAATTCTGCATATGATGGTAACTCCAATAGATCC
TTCTGACCTTCAAATTGTACCTTGGAGGAGATGAGGACACTAGTTTTACT
GATGCAGCATCTAGATTACTGTCATTTCATCATCATCATGATTACCATCA
TTTATCATCATTTCTTCTCATTTACCAGTTGTCAAATCAGGAAGTTTGTG
TCACCATTTAATTATCGGTTCTAAGAAATCTGTGTTGTTTTCCAGGCAAC
TGATCTACAACTACCCCGAGCAGCTGTTTGCGGATGCCGGTGTGATGGCG
ATCGAACATGCAGACTTCGAGGGAGTGGAGAGACTGGCTCTGGTCACAGG
TCAGAAACTTCAAAGTTTCTGATTTTTTAAAGCTTATTAACCTTCTCAAT
GCTGAGGCAATCTGTTGGTACTAAATTTGCCTAGGTTATTGGATTTAGAT
AGCAGGGGAGACTGTTAAAGCACCAGAATAAAAAGTAGAAATTACTAGAA
TAACTGATACTGTATGTTGTATGTTAGGTTAAATATCTAATGTGTGTTTT
TTTAGAAAAAGTGTCTTATTGCTTCGTTGATGAAGGTTAGACAGCCAGAT
AATTTTGTAAACGGTCAGACATTTCAGATAGCATCTTCTATCTTCCATCA
GTGACAATATCAAGTAGACATCTGAAATGTCTGTCCATTTACAAAATCAA
TCCAGGTGCTTGAGTATACTTTTGTATTATGTATCTTATGCTTTATCCCG
AATACCCACTTCCATCCCTGTACAGGAGGGGAGATCGTGTCCACGTTTGG
CAATCCTGAACTGGTGAAGCTGGGTCGCTGTGACCTCATCGAGGAGGTCA
TGATAGGGGAGGAGAAACTGCTGCACTTCTCAGGTCAGTTGTCATTGGTC
AGTTTCTCAGGTGAGATCTCATTGGTCAGCTACGCTTCTCAGGTAAGTTG
TCATTGGTTAGCTTCTCTTCTCACCTGAGATCTCATTGGCCAGTTACACT
TTGCAGGTACTTTGAGTCCTTCATTTGGTCTTTGATCACTTTAATTTGCA
AATCCCTGAAAAAGTGATTTGATCTACGATAAGAGATAAAAAAGGTAAAG
CGGCCGAATCTCAGACTGAGGACAAAGCATGACGCTTTTTCGTTAGCTAG
TAGTGTAATGCGGCTTTGCTTCGACTGGCGTATTTAGCCAAGCACAGCGG
GTCACACTTACTCTTCTTGATAAGTGCGCCGGGTTCTTTTACGTGCAGAG
GCTTGAGGCTTACACCTGAAGGTCCCTCATACACAGGGCCGTCAGCTTTA
CGTCTCCATCCAAAATGACTAGATCACAATTAAGTCACTAATGCCTTGGT
CATCTCCGATTGGTTGGTTCTTACAGGTGTTCCACTAGGAGAAGCCTGTA
CCGTTATCCTGCGCGGTGCCACACAGCAGATTCTGGACGAGGCGGAACGC
TCGCTACACGACGCTCTCTGCGTGCTGTCACAGACCGTCAAGGAGACCAA
GACCATATTTGGAGGAGGTACGTAAATCTATAGTACAGGAGCCAAGGTCT
GCAAAAAATGATTTCGTTCAACCCATCTTACAGAAAAGGTTTGACCTGAT
ATTTTGGTAGAGGGTGTCCTTCTTCATCGCACATGATGATTTTTTTCTCA
AATTGTGGTATCACGTTCCTGCTAGCATGATATAGACCAGATATTATCCA
TCCCCTGAAGCGTCTTCTTGGGCATGTTTGATCGCACATACATGTATTTG
TTGTTAACTCTTGTACTGCACATGATGGTAACTCCAATAGATCCTTCTGA
CCTTCAACTTGTACCTTGGAGGAGATGAGGACTCTAGTTTTACTGATGCA
GAATCTGTTCAACAAAGTTCTTTCTTTACAACATTTTTATACCTAGCTGT
TATTTCGATGACTATCTGTCACAAGAATTAAGAATCCTGTCTTTAGTGAC
CACCTGTCCTTGTAGACTAGATTTTATTGGTTCCCCTGAGTGGTCTTCTT
GGG Coding sequence (CDS) from alignment at Sc0000003:5088504..5096606+ >Blg00986.2 ID=Blg00986.2|Name=Blg00986.2|organism=Branchiostoma lanceolatum|type=CDS|length=1188bp|location=Sequence derived from alignment at Sc0000003:5088504..5096606+ (Branchiostoma lanceolatum)
ATGGCGGGAATGGCGCTGAACCCCATCCAGATCCTGAAGCAGCAGGCGGA
GGAGGAGCGCGGCGAGACCGCTCGTCTGTCGTCCTTCGTCGGCGCCATCG
CTATCGGCGATCTCATCAAGAGTACACTGGGACCAAAAGGCATGGACAAG
ATTCTTCAGTCCTCCAACCCTGCCCATGAGAACATTCAGGTGACCAATGA
CGGAGCTACAATCCTGAAGTCTATAGGTGTGGACAACCCTGCAGCAAAGG
TGCTCGTAGAAATTTCCAAGGTCCAAGACGATGAGGTTGGTGACGGGACC
ACGTCCGTGACCGTGCTTGCCTGCGAGCTTCTTAAGGAAGCGGAGAAACT
GGTCTCACAGAAGATCCATCCGCAAACGATAGTCGCTGGATTTCGCCGGG
CTACGGACGTCGCTAGGGCAGCACTACAAGATGCTTCAATAGACCATGGG
AATGAACCCGACAAGTTCCGTGAGGACCTTATGAACATCGCCCGTACTAC
CCTCGGCTCCAAGATCCTGACTCAGTACAAGGAACACTTCTCCAAGTTAT
CTGTGGATGCTGTTCTTAGACTTAAGGGTTCCACATCTCTTGATGCCATT
AAGATCATCAAGATCCCCGGTGGTGGATTGGTTGACTCATACCTTGATGA
AGGGTTCCTGTTACAGAAGAAGCCTGGTGTGAACCAACCCAAACGGATAG
AGAACGCACGAATCCTCATCGGTAACACCTCCATGGATGCCGACAAGATC
AAGGTGTTTGGTTCTCGCGTGCGTGTGGACTCAGTCGCTAAGGTTGCTGA
ACTTGAGCTGGCAGAGAAGGAGAAGATGAAGGAGAAAGTCGGTCGGATCC
TCAAGCACAACATTAACGTCTTCATCAATAGGCAACTGATCTACAACTAC
CCCGAGCAGCTGTTTGCGGATGCCGGTGTGATGGCGATCGAACATGCAGA
CTTCGAGGGAGTGGAGAGACTGGCTCTGGTCACAGGAGGGGAGATCGTGT
CCACGTTTGGCAATCCTGAACTGGTGAAGCTGGGTCGCTGTGACCTCATC
GAGGAGGTCATGATAGGGGAGGAGAAACTGCTGCACTTCTCAGGTCAGTT
GTCATTGGTCAGTTTCTCAGGTGAGATCTCATTGGTCAGCTACGCTTCTC
AGGTAAGTTGTCATTGGTTAGCTTCTCTTCTCACCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00986.2-exon-Sc0000003-1570713199:5088504..5088750 | Blg00986.2-exon-Sc0000003-1570713199:5088504..5088750 | Branchiostoma lanceolatum | exon |
| Blg00986.2-exon-Sc0000003-1570713199:5089680..5089820 | Blg00986.2-exon-Sc0000003-1570713199:5089680..5089820 | Branchiostoma lanceolatum | exon |
| Blg00986.2-exon-Sc0000003-1570713199:5090328..5090442 | Blg00986.2-exon-Sc0000003-1570713199:5090328..5090442 | Branchiostoma lanceolatum | exon |
| Blg00986.2-exon-Sc0000003-1570713199:5091214..5091403 | Blg00986.2-exon-Sc0000003-1570713199:5091214..5091403 | Branchiostoma lanceolatum | exon |
| Blg00986.2-exon-Sc0000003-1570713199:5091847..5091973 | Blg00986.2-exon-Sc0000003-1570713199:5091847..5091973 | Branchiostoma lanceolatum | exon |
| Blg00986.2-exon-Sc0000003-1570713199:5092489..5092564 | Blg00986.2-exon-Sc0000003-1570713199:5092489..5092564 | Branchiostoma lanceolatum | exon |
| Blg00986.2-exon-Sc0000003-1570713199:5093661..5093761 | Blg00986.2-exon-Sc0000003-1570713199:5093661..5093761 | Branchiostoma lanceolatum | exon |
| Blg00986.2-exon-Sc0000003-1570713199:5094132..5094259 | Blg00986.2-exon-Sc0000003-1570713199:5094132..5094259 | Branchiostoma lanceolatum | exon |
| Blg00986.2-exon-Sc0000003-1570713199:5094849..5094952 | Blg00986.2-exon-Sc0000003-1570713199:5094849..5094952 | Branchiostoma lanceolatum | exon |
| Blg00986.2-exon-Sc0000003-1570713199:5095379..5096606 | Blg00986.2-exon-Sc0000003-1570713199:5095379..5096606 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:5088504..5096606 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00986 |
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