Blg01012.1 (mRNA) - B. lanceolatum

Overview
NameBlg01012.1
Unique NameBlg01012.1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:3596813..3606573+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01012.1 ID=Blg01012.1|Name=Blg01012.1|organism=Branchiostoma lanceolatum|type=mRNA|length=9761bp|location=Sequence derived from alignment at Sc0000003:3596813..3606573+ (Branchiostoma lanceolatum)
GAAAAGAGCGAAATAAGAAGCAATATAATCTATTTTCAACCTGATATTTA CAATAGGTAGCTAGCAGTTGAGAAGTATCTGTAGTATTTACTTGGTTGTT TTTGTGAAAGATAGTCAAAAAGGGCGTGCACAAAAATTCATAGCTGCCAT TGTTCCACTGTTGTTGACAGATAGACCCCGAGGACAAGAAAACCGGAAAG ACCAGGTCCCAGCCTCGTTTCAGGCTCGCCGTGGGATTGGCTGTAGCCGT TCTGCTTGTGATCTGCGCAGTGGCGGCCGGTGGACTGATGACGTACTTCC GGGGGAAATGCGGACGTAAGGTAGAAAAACACAGTTTTCGCCTATGGGGA TGTCTATAGTTGAGGACAGTGATTGCCATCGATGCGGATAAGATTATAGT AGGGTACCTTAGAGAAGCACGATAAACGAACGTGTTCAAGTTGAGGGCAC AATTTACAAAAAAATTGAAAACAACTAACCATGCTATCTGTGACGTAAAA ATATCATCGTCAAAGTTCAACCATTCATGTCCCTAAACGCGATTCAAAGG CTTTAGAAAGCCAACAGTCATCTGTTCCTGTTTTGGTAGTGGGAAACTTT TTTCCAAACAGATAGCAAAACAAACAAACACACACACACACACACACACA CACACACACACACACACACACACACACACACACACACACACANNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACACACACACACACACA CACACACACACACACACACACACACACACACAAACAAACACAGTATTTAT CCGCGACCCCCGGACGGTCGGGGTGAGCTACAATTCCGCAAGACCCCATT TAAATGTCGTCGTCAAAATGTATAATATAAAAATAATTATCGGCCATTCT GAATAGAATTGAAACTAGAAAACTACTTGTTGGCTAGATAGTGATTTCTA AATAAATGTTGATTTTGTTGTTGTTGTTACTGTTGTACACACAGTACACC ATAAAGGCCTCCGTGAATGGCCAGACGTTCACAGAGGAGGTGGAAGTGGA CAGGGAGAACGGCATGGTGGTGTACCGGGATGACGTCAGCACGGAGGACG GGGAGATCATACAAACTAAAGAGGTAGGGTAGAAACATTACCCATCAGTT AAAGATTGGGGCTTCAGATCTAAGATAAAAGTCTGTATATTTCTGTTACT TGAATGGAGTTGATCGAATCAATAGATCACTTTTAAAAAAAAAGGCAAAA CAACAAACGACAAGGGTCCCACTGTAAGGCAGTGTCTCATACTGAGTTGG GCCACCCTGGGTAATTAAAACAGAAAGTAAGAAATTAAAAAAAAAATGTA ATTGGAAAAGGGGCACATTGCAAACTACGGGCTGTAGACCAAAAAACTTT GTTATGTACTAGGCTATTGAATCATCGTAATAGGAATGTCATCTGGTTGA CTTTGTGACAGGGATTGTCCGTGCTCTACCAGAGAGGCAACTGTTATCTG TTGGAGGACAAAAAGAACAACCAGACGAGCGACTTTGACATTGACGCGGC GGAGGTGGCCATGGAGTCTTTAGCTGTAGGTATAGCATGCCTGTCTTATG TGTGTGCTCTTGTTTTTACTTTCATAACTTGTTGATGATCCACGTATATA TATATAATATATGTAATATATATATATATATATATATATTACATTTTACA GCAATGCCTCATACATGCTTGCCATCACTAGTATTTTACTTCAACATAGA AAAGATTGCAACAAGAAATGCTTCTGTCGAAAAGATGAATCTCTTAAGTT ATGCGTCGCAAAAGACGAAAACGACGATTGTGACTTGAAGATAAACTGGT AATATGTCACTGATCGATTCAAATTGTCGTCGACAGAATGCCGGTGACGT GCCGAGTTTTCACCTTGACCGAGTCGTCTTCCTGAACCGGTCAGTTCCCG TTAGCCCTGAAGATGACGTCACCCTGCGACCACAGCTGTCACCTGTGTGT CTTGACGCCACTCTGTACCGGGTCCAAGAAGAGGACGCTCCAGGTAAAGC CGTTGCACCTATCCTACCTTGTTCTAAACTTCATTGCAATTCTATATTTT TGTGCAGGTCTCAGTGAAAAAAGACCTGTAATCGGGTTAATGTCGAAATC ACTTTTGAATGCTCTGTTGGGGGACCGATGCAAAGTAGTTCTCCTTGGCA ATTTTTTGGCCTTAACCTATCATTCATCCGTTCTTTTTTGCAACATCTAT TAGCATGTGATTAACAGTTAATGGAATATGATCTGCAGGAACATGAGATA ACTTTGTAAATTGTACTGAATTTCAGATCATATGGGACAAGAAATTGATG ATGGAGGGAGGATAGAAACACCGCACAGTCGTGTCAGGCGGTCTGGTGGG GATATGTGTAAATTTCCAAAAATAATCATTATGTATGTTGAACCATGTTC CAAGCAATGGCTCTGGTGTAGATGTCAATTTCATTGCTGGTGGTGCGGAT GCTATAAGATAGAGATTGTCTTCGGAAAGTGTAGCTGATTCCTTTTATCA TCGATGATTACGTCTTTTCTGTGTATTTCTTATTTCTTATCATTTATTCA TCCCTCACGTGAATGGTATTATTCTCATCTAATGATGTCACCATTATGCA AAAGAGATATGCTTTTTCATGTATCATGAAATAATGCAGATTTTTTCAAC GTGAAAATAAATCTTATACAGTATGTTGTAGAATTACTTTATGCCTGTTT CGATTTTAGAAATGACAATGATTATATGTATGTAATAGGATCACAATATC CACTGTAACATTCTTAATAATCACCAAATGTGTTTGTGTATTATGTATAT CTATGCATTGTGTATTACGGGGTATAACAAAAGCAAGAACAAGAACACAT AGGAATGACTTATGCAAGTAAGCAATTATGGGGTTATAGAGTAAAGGAGT CCTAAACTCCAGAAGGGGGTGTTATTTTCCACTAGACTATGTATCAATAG ATACATAATCAGGCGACTTTTTACAGAATTCTGCTTGTGGTGAATTACAC AAGGTGTGTTTTTTAAAACAATATGATACTCACTAAACCCGTACAGACCC TACCCATGTATTCCCTATGCGTAAACATACATCTTTAATCGCAAATGATT TTATCATAAATGAGGGGGTCAAGCACAATAAGAAGGCCAATTGTTGAGAA GATATAAAAGAACATATAGCAAGACGAGTTTTTCTTAACCACCCTGACAT TCTTTTTGTAATCTGAATTTTGTCAGGCCTTGCCAGGCACATTGTATTAA GCGATAGGCTGAGGTTGTTTAATTTAATTAATTAGAAAATAGAGGGTCAC CTGGGAAATTTAGTAGAATACTGGATGCTTTTTGATGCGCTCGGAACTAG TGGGTACTTTATCGTATACTGTAAAGAATATAAATTTTTACTTCCTAAAA TTATCATCTATTGGAACATAGCTCCTCCTCTGGAGTTTAAGACTCCTTTA AGTGACAAATCCAAACTCTCCGCCAAGAGGAATTTTCTCAAACATAGGTC AACCCTTGATAGTAGCCCGATGCTGTTTGGGCAACCTTGGATGTACATGT ATGTCAGTAGCGGAACCCTTACATAAGTAAACAAGACTGATAAAGAACAC TGCTACTTTGTTCAAAATTCAACATGCATAATCTCGCGACTACTAGCAGA CGACATGCCAAATAACATACAAATGCATCAAGGGGATCGTGAGCTATAGC TGTGAACACACAGACACAACCAACCGCAGTACCCCAGTAGGGGTGAACTT ACTTCACGGAGGCAATAAAGAATACCGGCTTCCTGATGCCTAGAACTATT TTATTTAGTTGCACTATAAAAGACACGGGGCATTGTTGCAGCTACATGTG CTGCTACAAGACGCAAGCGACAGAAACCCAGATACTACAGATTCAGGTCG GTAGACAGACCTTTGAACCTGCATTAATTGTCATGCCACTTGATTTGACG TGAAAATCCGTTAAAAAGTATCATATTCCACCACCCTCAGAGACTCCCAC CACGTTTAGACTTCGTTCACTTTAAACCTGAGATAGTGTTTACACTTTCC GCTTCAGCGCTCTCGTTGGCTTAATACCTAATACTTCTTACGCATACGCA CAACAAGCATTCCATTTCTTCACATCAACATTTGTCTCTAATTAGGGTAA TCACTATATTTTTCAATAATCAAGGAGATAGACTGCGTGGTGAATTTTCA TGTCTTGAATTGAAGGTATTTGGTTCCCCTAATGAGGGACCGTCGCAACA TGACATTTGTTAAGGTCAAAAATGGAATTCGAAGGTCATTGTATCTTACC AACAATTTCGAGCAAATTGGCTTTTTTTACAAAGAAGACAAAGAGACTAC CTCGTTGTCATGTTGAGTAATTCATATCTTGATGTTTTGCATTGTTTAAG TTTAATCATTAAAGATTTTCTTAGAAAACTGCCATAATCATGACGTTAGC GAGGGTGAAGGGAGAAATTAGTAGGTCGTGGTATCCTGCCAGCAAGCTCA GGGCTATTGAAATTTTGATCTACAGAACAAAGAGATTCCCTTCCCCTCCG CTGACTGACGTAGTCATACCAAACCTCATAGAAAGCTGATGACGTTACTT TGGATGACACGTATGTCACAAAGATACTTATGGTGACGAAATTCTCATGC CTCAGATGCATTTTTGTATCGACAATCCGTTAAAATATCTATCATATACC CTCTATATACGTTTAGACTTCGCTCGATTTAAAACCCTCCTGAGATAGTA TGTTTACAATTTCCGCTTCAGCGCTCTCATGAGCTTAATATCTGATACCT CTTACTTATGCACAGAGGTATCATGTACATGTGTAGGTCATGGTATCTTA GCAACAGATTCGAGTATATTGGCGTTTATATCAGAAAAGACAAAGCGACT ACCATGTTGTCATGTTACGTCTTGATGTTTTTCATTGTTTAAGTTTAGTC ATTAAAGATTTTCTTAGAAAACTGCAATCACTCTGACGTTAGCGTAGGTC AAAAGAGCAATTAGTAGGTCGTGGTATTCTGCCAACAAGCTTCTGGCTAT TGAAATTTTGATCCACGGAACAAAAAGATTCCCTTCCCCTCCGCCGACCG ACGTAATCATACCAAGCCTTAAGGTGCTGGCATTGTTTTCGACTGCATAC CAGAGCTGGAACCCTGCACAGACGGTCGGCACTTGAAGTTGGTCTCTGTT GGAGTCGGACGCAAAAGATTGAAAAAAAGCCATCATGGATCAGAAACCTG AAGTCAAAGTAAGTGTTCATTTTTCTGTTATCAGTATTGCGTCACAATCT GACGCCATATCGTGGGTGCTTTAGTTTACCAGTGCTCCCATACTCGCTCT CCCGATTGAGCACCCGGGCTAGTAGACTCGCTGAAGAGTACAAAATGTCT TCAAGCCACCGCTTTAATAGGCTCCACGAAACGGAGAGAAAGAAGGTAAA GAAGGTCACGAGGAAACTAGGGATCTTTGCGGATCACTAGAAATCCAAAA TGTGGCATACTTGTCCACACTAGTACTGTGCATAGGTTCATCGCACACCC CTTTCTTTCTACCACATTCTAGCATGTAGCATATAAGGAAAAGCATGTCG TAGACTTATTCATCGAGCTCATTCTCGTTAAAGGCTCCTCCCTTATTTCA GAGAGCTTTAAAGCTGTGAGATTATTTGACATAAAAACTTTTTTTCTACA AAATTCAATTGAAAATTTTGTTTATCATCACTGAATTGATGACATGTCTA AGAGGTATGTCTGACTGGATACCTCACACATAGAAAACAGCGAAATAAGA AGCACTGTTTTCAACCTGATGTATGCGAGCAGCTAGCTAGCAGTTGTGAA TCATCCCAGTCTTTACTTGGTTGTTTTTCTCAAAGATTGGCAGAAAGGGG CGTGTACAAATATTAATGGTGGCAACTGTTACACTGCCGTTGACAGATAG AACCCGAGGCCAAGAAAACCGGAACGACCTGGTCCCAGCCTCGTTTCAGG CTCGCCGTGGGATTGGCTGTAGCCTTGCTTCTTGTGACCTGCGCAGTGGC CGCCGCTGGACTGATGATGTACTTTCGGGGGAAATGCGGAAATAAACGGG TGTGACTTTTTGTTTGTTTGTTTATCATATGTTTGTTCATTTTTGATGCT GCTTCTTCAGAAATGTTACGCACTAAATAATGAGGAACGCGGTTTGAATG TGGATGGTTGATACAGTTGCTCTTTGTTTTTGTAAGTTCACAGCCAGTAA ATGAAAGTTTACTGTGTCATCGGACCTTTTGTTTGGACAGAATTGTGAAA TCAAAACAACATGCCTACTTTGTGGCTACATAAGAAATACACAAGGTAAC AATAACAAGGAACTTTTGAATTCCAAAATCTAACCAGTTGCTTGAGTAAC AGTTACCTTGCTTGTTCCTTAATACTTGGATGTCTAAGCTTCATCGACGT GAATATGGATTTTAAAAAAAATTGCTATTATTGTTATTGTGCGCACAGTA CACCATAAAGACCTCCGTGAATGGCCGGACGTTCACAGAGGAGGTGGAAG TGGACCGGGAGAACGGCATGGTGGTGTACCGGGATGACGTCAGTACTGAG GACGGGGAGATCATACAAACCAAAGAGGGGAAGATAACTGTCATGCATCA GTTAAAGTCTGGGGCTTCAAGTAACATGTTTCTGTTATACAAATGTTCTT TCAATGAAATCGCTTAACTACAGATAAAGGGGCACAACATATTAAATGGA AATGTAATTGGAAAAGGGCTACATTGCAAACCATGAGCTGAAGACAAACT TTGTTAGGTACTAGGCTATTACATTATCGTAATAGGGATTTCATAAGGTT TACATCGTTACAGGGGTTGTCAGTGCTCTACCAGAGAGGCAACTGTTATC TGCTGGAGGATAAAAACAACAACCAGACGGGCGACTTGGACATTGACGCG GCAGAGGCTGCGATGGAGGCCTTAGCAGTGAGTATTATTTTGAAAAAATC AATGTTTGGTGTCTGTTTTGCTTTCATTACCTGTTAACGATAAAGATCTA CATTTTACTGAAAAGAACGATAATAGTCCTCATTCATGTTACCAATTGCA ACCACTATCATTTTACTGAAGTTGAAAAGTTAAGGACAAGAAATTCTTTC ATCGGAAAGATAAACATAATTTCCCTAGCGGCACAGGCAAGGAAAAAAAG GTGAAAAGAATAACGTCCAGAGTATAAAATAGCTTGTCATTTGATTTTTT CCTCCATTGGCCATACGTTCCCTACTAGATTGTACTAAATGCTATGTTGA AACGAGCACATTATACTCGCACACCATTCATCAATTGGAGAACACCAGTC AAGGACAAGAAATTGTATTATTCATTCAACTTTTTTTTCGACAGAATGCC GGTGACTTGCCGAGTTTTCATGTTGACCAAGTCGTGTTCCTGAACCGGTC AGTTCCAGTTGGCCCTGAAGATGACGTCATCTTACGATCACAGCTGCCGC CCGTGTGTCGTGACGCCACTCTGTACCGGGTACAGGAGGAGGACGCTCGA GGTAAACCTCTTCGACCAACTTGTTCTAAACTCGATACCAATTGTAGATT ACAGTGCTGGTACATAACTGAATAATGCTGTGTTCGCCGGCCATAAAGTA GTTTTCGTTGGCACTTTTGGTCTGAACTAAAAATGTTCTGTCCTCCCATC CTTCCTGTGCCAATCATTGGATAAACATGTCTGCAGGAACATAGAATAAC CCTGTAAATTGTACTGAATTTCAGATTACTTGGGGCAGGAAATTGACGAC GAAGAGAGGGTGGAAACGTCCCACAGTCGTGTTAGACGGTCTTATGAGAA TTATTGCGGTATCGGAGGGACAAGAATCACGCTTGTGCATGTAGGACGAT GCCCATGGAGATGGGGCTGGTGCCGTAGATGTCGATTTAATTGCTGGTGG TGCAATTGCTATAAATTTGAGCTTTCTTGTGGTGGAGGTGCATATGGCTA TGAAGGTTTACCCTGACGTTGTGTAGTCTGCGTATGTCTTTTTTATTCTT TGTTCATTGTTTATTATGCATGATATTATTCAAATCTTTCAATGCACAGT TCTGAGCTTTTGATATTGTAAAAAATAACATGTTTACTTCAATTTCAAAG CAAAGCTTGCTGTAAAATGGATTAATGACTGTTTTGATTTTAGAAATGCC AAAAGCATCATGTATACAGTGGAATGGTAACATAGTATCCCTTTGCTTTA TTATATCTTACTAAACATTTTATGCATTGTGTATTATGGGGTATCTAAGG ATCTAATATCTACAAAGTTTTTCAGCCCTAGCCTACCTAACAGATTTAAT AGAACATTTATAATAGCAACAGCTTGACATCTTTTTATGTTTTGTTTGCA TTCTGATAAGCATTTTCGTTGTATCAACAAGTTCTGTTTCTGTTTTATTT TACTTCAATGTATTGATAACCCAATGATGGTGTTTTGTCGTTGAATAAAG GTCAAAAGAAC

Coding sequence (CDS) from alignment at Sc0000003:3596813..3606573+

>Blg01012.1 ID=Blg01012.1|Name=Blg01012.1|organism=Branchiostoma lanceolatum|type=CDS|length=675bp|location=Sequence derived from alignment at Sc0000003:3596813..3606573+ (Branchiostoma lanceolatum)
ATGACGTACTTCCGGGGGAAATGCGGACGTAAGTACACCATAAAGGCCTC
CGTGAATGGCCAGACGTTCACAGAGGAGGTGGAAGTGGACAGGGAGAACG
GCATGGTGGTGTACCGGGATGACGTCAGCACGGAGGACGGGGAGATCATA
CAAACTAAAGAGGGGTTGTCAGTGCTCTACCAGAGAGGCAACTGTTATCT
GCTGGAGGATAAAAACAACAACCAGACGGGCGACTTGGACATTGACGCGG
CAGAGGCTGCGATGGAGGCCTTAGCAAATGCCGGTGACTTGCCGAGTTTT
CATGTTGACCAAGTCGTGTTCCTGAACCGGTCAGTTCCAGTTGGCCCTGA
AGATGACGTCATCTTACGATCACAGCTGCCGCCCGTGTGTCGTGACGCCA
CTCTGTACCGGGTACAGGAGGAGGACGCTCGAGATTACTTGGGGCAGGAA
ATTGACGACGAAGAGAGGGTGGAAACGTCCCACAGTCGTGTTAGACGGTC
TTATGAGAATTATTGCGGTATCGGAGGGACAAGAATCACGCTTGTGCATG
TAGGACGATGCCCATGGAGATGGGGCTGGTGCCGTAGATGTCGATTTAAT
TGCTGGTGGTGCAATTGCTATAAATTTGAGCTTTCTTGTGGTGGAGGTGC
ATATGGCTATGAAGGTTTACCCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01012.1Blg01012.1-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01012.1-exon-Sc0000003-1570713199:3596813..3597132Blg01012.1-exon-Sc0000003-1570713199:3596813..3597132Branchiostoma lanceolatumexon
Blg01012.1-exon-Sc0000003-1570713199:3599007..3599135Blg01012.1-exon-Sc0000003-1570713199:3599007..3599135Branchiostoma lanceolatumexon
Blg01012.1-exon-Sc0000003-1570713199:3604926..3605039Blg01012.1-exon-Sc0000003-1570713199:3604926..3605039Branchiostoma lanceolatumexon
Blg01012.1-exon-Sc0000003-1570713199:3605457..3605613Blg01012.1-exon-Sc0000003-1570713199:3605457..3605613Branchiostoma lanceolatumexon
Blg01012.1-exon-Sc0000003-1570713199:3605837..3606573Blg01012.1-exon-Sc0000003-1570713199:3605837..3606573Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:3596813..3606573 +
Properties
Property NameValue
GeneIDBlg01012