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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:3603164..3612546+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01012.4 ID=Blg01012.4|Name=Blg01012.4|organism=Branchiostoma lanceolatum|type=mRNA|length=9383bp|location=Sequence derived from alignment at Sc0000003:3603164..3612546+ (Branchiostoma lanceolatum)
CGTAATCATACCAAGCCTTAAGGTGCTGGCATTGTTTTCGACTGCATACC
AGAGCTGGAACCCTGCACAGACGGTCGGCACTTGAAGTTGGTCTCTGTTG
GAGTCGGACGCAAAAGATTGAAAAAAAGCCATCATGGATCAGAAACCTGA
AGTCAAAGTAAGTGTTCATTTTTCTGTTATCAGTATTGCGTCACAATCTG
ACGCCATATCGTGGGTGCTTTAGTTTACCAGTGCTCCCATACTCGCTCTC
CCGATTGAGCACCCGGGCTAGTAGACTCGCTGAAGAGTACAAAATGTCTT
CAAGCCACCGCTTTAATAGGCTCCACGAAACGGAGAGAAAGAAGGTAAAG
AAGGTCACGAGGAAACTAGGGATCTTTGCGGATCACTAGAAATCCAAAAT
GTGGCATACTTGTCCACACTAGTACTGTGCATAGGTTCATCGCACACCCC
TTTCTTTCTACCACATTCTAGCATGTAGCATATAAGGAAAAGCATGTCGT
AGACTTATTCATCGAGCTCATTCTCGTTAAAGGCTCCTCCCTTATTTCAG
AGAGCTTTAAAGCTGTGAGATTATTTGACATAAAAACTTTTTTTCTACAA
AATTCAATTGAAAATTTTGTTTATCATCACTGAATTGATGACATGTCTAA
GAGGTATGTCTGACTGGATACCTCACACATAGAAAACAGCGAAATAAGAA
GCACTGTTTTCAACCTGATGTATGCGAGCAGCTAGCTAGCAGTTGTGAAT
CATCCCAGTCTTTACTTGGTTGTTTTTCTCAAAGATTGGCAGAAAGGGGC
GTGTACAAATATTAATGGTGGCAACTGTTACACTGCCGTTGACAGATAGA
ACCCGAGGCCAAGAAAACCGGAACGACCTGGTCCCAGCCTCGTTTCAGGC
TCGCCGTGGGATTGGCTGTAGCCTTGCTTCTTGTGACCTGCGCAGTGGCC
GCCGCTGGACTGATGATGTACTTTCGGGGGAAATGCGGAAATAAACGGGT
GTGACTTTTTGTTTGTTTGTTTATCATATGTTTGTTCATTTTTGATGCTG
CTTCTTCAGAAATGTTACGCACTAAATAATGAGGAACGCGGTTTGAATGT
GGATGGTTGATACAGTTGCTCTTTGTTTTTGTAAGTTCACAGCCAGTAAA
TGAAAGTTTACTGTGTCATCGGACCTTTTGTTTGGACAGAATTGTGAAAT
CAAAACAACATGCCTACTTTGTGGCTACATAAGAAATACACAAGGTAACA
ATAACAAGGAACTTTTGAATTCCAAAATCTAACCAGTTGCTTGAGTAACA
GTTACCTTGCTTGTTCCTTAATACTTGGATGTCTAAGCTTCATCGACGTG
AATATGGATTTTAAAAAAAATTGCTATTATTGTTATTGTGCGCACAGTAC
ACCATAAAGACCTCCGTGAATGGCCGGACGTTCACAGAGGAGGTGGAAGT
GGACCGGGAGAACGGCATGGTGGTGTACCGGGATGACGTCAGTACTGAGG
ACGGGGAGATCATACAAACCAAAGAGGGGAAGATAACTGTCATGCATCAG
TTAAAGTCTGGGGCTTCAAGTAACATGTTTCTGTTATACAAATGTTCTTT
CAATGAAATCGCTTAACTACAGATAAAGGGGCACAACATATTAAATGGAA
ATGTAATTGGAAAAGGGCTACATTGCAAACCATGAGCTGAAGACAAACTT
TGTTAGGTACTAGGCTATTACATTATCGTAATAGGGATTTCATAAGGTTT
ACATCGTTACAGGGGTTGTCAGTGCTCTACCAGAGAGGCAACTGTTATCT
GCTGGAGGATAAAAACAACAACCAGACGGGCGACTTGGACATTGACGCGG
CAGAGGCTGCGATGGAGGCCTTAGCAGTGAGTATTATTTTGAAAAAATCA
ATGTTTGGTGTCTGTTTTGCTTTCATTACCTGTTAACGATAAAGATCTAC
ATTTTACTGAAAAGAACGATAATAGTCCTCATTCATGTTACCAATTGCAA
CCACTATCATTTTACTGAAGTTGAAAAGTTAAGGACAAGAAATTCTTTCA
TCGGAAAGATAAACATAATTTCCCTAGCGGCACAGGCAAGGAAAAAAAGG
TGAAAAGAATAACGTCCAGAGTATAAAATAGCTTGTCATTTGATTTTTTC
CTCCATTGGCCATACGTTCCCTACTAGATTGTACTAAATGCTATGTTGAA
ACGAGCACATTATACTCGCACACCATTCATCAATTGGAGAACACCAGTCA
AGGACAAGAAATTGTATTATTCATTCAACTTTTTTTTCGACAGAATGCCG
GTGACTTGCCGAGTTTTCATGTTGACCAAGTCGTGTTCCTGAACCGGTCA
GTTCCAGTTGGCCCTGAAGATGACGTCATCTTACGATCACAGCTGCCGCC
CGTGTGTCGTGACGCCACTCTGTACCGGGTACAGGAGGAGGACGCTCGAG
GTAAACCTCTTCGACCAACTTGTTCTAAACTCGATACCAATTGTAGATTA
CAGTGCTGGTACATAACTGAATAATGCTGTGTTCGCCGGCCATAAAGTAG
TTTTCGTTGGCACTTTTGGTCTGAACTAAAAATGTTCTGTCCTCCCATCC
TTCCTGTGCCAATCATTGGATAAACATGTCTGCAGGAACATAGAATAACC
CTGTAAATTGTACTGAATTTCAGATTACTTGGGGCAGGAAATTGACGACG
AAGAGAGGGTGGAAACGTCCCACAGTCGTGTTAGACGGTCTTATGAGAAT
TATTGCGGTATCGGAGGGACAAGAATCACGCTTGTGCATGTAGGACGATG
CCCATGGAGATGGGGCTGGTGCCGTAGATGTCGATTTAATTGCTGGTGGT
GCAATTGCTATAAATTTGAGCTTTCTTGTGGTGGAGGTGCATATGGCTAT
GAAGGTTTACCCTGACGTTGTGTAGTCTGCGTATGTCTTTTTTATTCTTT
GTTCATTGTTTATTATGCATGATATTATTCAAATCTTTCAATGCACAGTT
CTGAGCTTTTGATATTGTAAAAAATAACATGTTTACTTCAATTTCAAAGC
AAAGCTTGCTGTAAAATGGATTAATGACTGTTTTGATTTTAGAAATGCCA
AAAGCATCATGTATACAGTGGAATGGTAACATAGTATCCCTTTGCTTTAT
TATATCTTACTAAACATTTTATGCATTGTGTATTATGGGGTATCTAAGGA
TCTAATATCTACAAAGTTTTTCAGCCCTAGCCTACCTAACAGATTTAATA
GAACATTTATAATAGCAACAGCTTGACATCTTTTTATGTTTTGTTTGCAT
TCTGATAAGCATTTTCGTTGTATCAACAAGTTCTGTTTCTGTTTTATTTT
ACTTCAATGTATTGATAACCCAATGATGGTGTTTTGTCGTTGAATAAAGG
TCAAAAGAACTGATTTTGGATTTCTTTTTTCCATCTTACCATACTACCTA
TATGGAACTAGTGATACAACATCACCAAATGCATGATTTCATGATAATAT
TGTGTTTTTGTGTGCGTCTGAAGTGGTCGAAGTGTGGATATTGTAGATCA
TCTTTTCCTTATTACTACTACCTTTTCAAAACCCCTACTGAGTTATCATT
GAGGGATATCATATCTGGTTTATAATTGTATGATTATGTAACGTTTTATT
TCTAGATTGACTTTATACACAAACATTTAAAACAGCTTAATGTGTTGTTA
AAGTGACGCATAAACAAACCAGGGAAACATATTAAGTAACTGTGTATATT
TGTGAATATGTACATTTGTAATTTGCATTACACACATGCAAACAAAACGT
TATTATCAGGCATAAACTCTACTATTAGCCCTTAAGTGTGTCGGACAAAC
TTGGCGCTACATGCATGTCAACAGTTGAACCAACAGAAAAACAAGATATC
GAAGATCGCATACCTCTGTGAAATATTGACAAAATTTAATAATCTCCAAG
CAGATCTACACGGTGCACCGAAAATCATGTATGCTAGCCAGAGAAGCTCC
AGTCAGCCAGATAAGCTCCAGTCGGTAGGTGCGAACTAGAGCTTATCTGT
CTGACTGGAGCTTTTCTGGCTAGCATATACGATTTTCGGTGCACCGTGTA
GATCTGCTTAGAGATTACTGACTGGCAAAAGGTATCTGTATCTATATCTA
TATCTTTATAGCCGGTATAACCGCCATTAGGTGTAACACACCAGCTGACA
CACCACACACTAGGTACCATCAAAGAGCGCTATCTTCGACGTAAGAGTCG
TCCCACTAAACTGCCATATATTGTTAACTACATGATACATTTTATGATGA
AGCATCTAGGAAATTCCCATGTCTCAGTTCCATCTTTGCACTTGGAAAAA
ATGGGAGTGACATACCCTGCGTTTGCTTGCAAATGCTGTTTTTTTCCAGT
GATGTTCTTTTGCTGTAATAGACGATCTAGGTTGCTAATCGACTATTTCT
TAAATTCTGACAGCTTCGATTTGACGTGAAAACCTGTCAAAACTAGTATC
CTTTACCTTCAGATCACGTTTAGACTTCGTTGGCTTTAAGAACCTCATAT
CTGGGGTAGTATGTTTACAATTTCCGCTTCAGTGCTTTCAGGAACGAACA
TTTGGATGATACTTGTGGCATGCATACAGAAAGCCTCTCATGTTTTTAAT
GTTTGCCTTTAACTTAGTGATGTCAGTGCTATTGATTTTGTAACCAAATA
GATTAACACTGTGGCGAATTGCCTACATTTTTCATGTCTTGAATGATTTG
AAAACACATTGGCACACCTAATAAGGTACCATCGCAACATGACCTTTGTA
AAGGCCAAAAATGGAATTCGTAGGTCACAGTATCTCAGCAACAGGTTTGA
GCCCATTGGCATTTTTCACAGAGACGACAAAGAGACTACCTTCTTGTCAT
GTTGTGTAATGCATGATTTTATGTTCTGCATTGTTTACGTTAAAACTTTT
GTCATTAAGATTCTCTTAGCAAACGTCCATAATCATGACGTTAGCGTAGG
TCAAGACAGAAATCAGAAATGAGCTAGGGGCTATTCAAGTCTATGATCCT
CAGAACAAAGAAATTTTTCAATCATGTGAAATAATTATGCAAGCCTTAGG
ATAATAGGTGCAGTTATTGTTCTCGACTGTGCATACCACAGTTATAACCC
CGTGCAGGCGGTCTGAACTTAAAGTTTGTCGCTGTCTGAATCAGACGCAA
CAGATCTAAAAGAAGCCATCATGGATCAGAAACCTGAAATCAAAGTAAGT
GTATATTTTGTTTGTTTTCAGTACTGCGTCACAATCCAGCCGCACGTTCG
CTCGTCGTCACGTCGGTTGTGTAGAATCGTTGGCTTGGCGCCATTCTTTT
TAGTTTACCGGGCTCCTATACTCGCTCCCTCACTTGAGAGCCGGTAAATT
AAATATCAACAGGGTGGCATCCGGGCTAGTAGAATCACAGTGTCTATCTA
GCAGGCTAGCCGCCACATTATGATTTGTCCCACAAAAGACAGGGTAGGGG
GTTAAAAGCCACTAGGGATCTATGCGTTACAATAGAGGTTAAAAGTTGAC
ATACTCTTTGACGCTGTGCATATGTCAGCCGTCGCTTTCTATAGCTAGAC
AAATCTATTCCTTCCACAGTTATACCACCTAATTTAGATGATGTCTCAAC
CTGACTTATTATACACTCATTTAAGTCTCCTCACTACAAGCTGCCTTAGT
TTAAATTCACTTAAATTACCACAGCTTTCAGAAATTCAATTACAAAGTTT
TCGGGACTTTGAGTTATGTCTGACTACAGCTGGTTAACGTTACATCACAC
CTTGAAAGGAGCTAAATAAGAAGCAATATAATCTATTTTCAGACTGATAT
TTACAATAGGTAGCTAGCAGTTGAGAAGTATCTGTAGTATTTACTTGGTT
GTTTTTGTGAAAGATAGTCAAAAAGGGCGTGCACAAAAATTCATAGCTGC
TATTGTTCCACTGTTGTTGACAGATAGACCCAGAGGACAAGAAAACCGGA
AAGACCAGGTCCCAGCCTCGTTTCAGGCTCGCCGTGGGATTGGCTGTAGC
CTTGCTGCTTGTGACCTGCGCAGTGGCCGCTGGTGGACTGATGACGTACT
TCCGGGGGAAATGCGGACGTAAGGTAGAAAAACACAGTTTTCGCCTGCGG
GGATTTCTATAGACTATTAGTTGACTGATTGCCATCGATGCGGAATAAAT
TATAGTAGGGTACCCTAGAGAAGTACGATAAACGAATGTGTGGAAGTTGA
TGGCAAAATTTACAAAAACATTGAAAACAACTAACCATGCTATCTGTGAC
GTCAAAATATCATCCGCAAATCAAGTTCAACCATTCATTTCCCTAAACGC
GATTCAAAGGCTTTAAACAGTCATCTATTCCTGTTTTGGTCGCTGGAAAC
TTTTTTTTCCAAACAGATAGCAAAAATAAAAAACACACACAAACACACAG
TATTTATCCGCGACCCCCGGAGTCTTTGACATAGCGGCAAAAACGTCGCG
CCCCTAAATCTTGAACCGTACATATGTAAGCCCTTTAACGTGAAAGCCAG
CGAGACACGAACTTTATTGTATGGTAGTTTCGACCCATAAATGTGCGTGA
CCTTTACAGCTGATGGCCGGGGTGAGACGGCTGCACTTCCGCAAGACCCC
GCATGACTCCATTTAAATGTCGTCGTCAAAATGTATAATATGAAAATAAT
TATCGGTCTATTCAAAATAGAATTGAAACTACCGAAAATAATTTCATCAG
GTTGGTAGAATATAGGATATAGGAGATTCTTATTACACAACCAGGTAATC
TCACCTGCTAACATTTCGATGTCTGTTAGACACCTTCTTCAGAGCTTCTG
ACTGGAGTAACTGCTTCTCACCGCTATAAGTAGCCGATGTAGGTGGCGCT
TTTGCGGTGAGAACACTGTCCCAAAAGCGCCACCTACATTGGCTACTTAT
AGCGGTGAGAAGCAGTACTCCAGTCAGAAGCTCTGAAGAAGGTGTCTCAT
AGACATCGAAACGTCAGCAAGTGAGATTACCTGGTTATGAAAAAAGAATC
TCCTCGAATTGAAACTAATGTTGGCTAGATAGTGATTTCTAAATAAATGT
TGATTTTTTTTTGTTGTTGTTACTGTTGCACAAACAGTTCACCATTAAGG
CCTCCGTGAATGGTCAGACGTTCACAGAGGAGGTGGAAGTGGACCGGGAG
AACGGCATGGTGGTGTACCGGGATGACGTCAGTACTGAGGACGGGGAGAT
CATACAAACCAAAGAGGTAGAGCAAAGGATATGTTCTAGTAATACATAGG
TCTTAAAATTATATGAGTCTATTTTTGCACAAGAAAGTTTGTGTAACGCT
GCAATTAAACAATCAATGGGCAATGAATTGAAAAAAAATAATTTTTTTGT
CCTGAAAAAGCTAAGAGCCGCTCGAATACCGTTCAAATCAAACTTTAAAA
ACAGGTAACAACAAGTTTACAGCTCATATGCAATCTTATAGGGATAATTC
AAAGTTTAATTTGCTTCTTCACAGGGAGTAACTGTGCTCTACCGCCGAGG
TACCTGCTACGTGTTGGAGGACGAAAATAACAACCAAACAACCGACATCG
ATGTGGTAGAGGCTGCGACAGAGTCCTTAGCTGTGAGTTTAAATCTATGT
ATCTCGTAATTTTTTTTGTCTACTCGTTACCTAGAATATTACTTCCCACC
ATACCAAACTCATGATAGTGTTAGTGAGGTCGTATGGGTACGGCAGGGGT
TTCGGCCCAGAACTCAGCGTTCCCGGGTTCGACCCCCCCCCTTCCCCTCC
GCCCGACGCCACCGATGTTGTGCCCGTAGGAAAGTCACTGTACAGGATAT
TCCCTCACTCCATCCAGGTGTAAAAAGTGGGTATGATGTTTATGTACGTG
GCACTGTTAAGAGATGTTATGAAAAACTCAAGTGTGATGTCACGTCGTCC
TTGTCTGTCTTAAAGCGAAGTAAACAACAACAAAGAAATATAGTGTCTAT
CAAACCTTCTGTACCACAGAATGCCGGTGATGTTCCGAGTTTTGACGTTG
ACCGAGTCGTCTTCCTGAATCGGTCTGTTCCGGTTAGCCCTGAAGATGAC
GTCATCCTGCGAGCACAACTGCCACCCGTGTGTCGTGATGCTGCTCTGTA
CCGGGTACAAGAGGAGGACGCTGGAGGTAAGGTTACACATATTTAGCTTC
AGGTTATGCTGATAAATATTACTTTTGCAAGTATCCGCATACCAATCAAA
AAGAAGCAAGAACACTTACTAAGAAACTACCATGCTTGCCTACCACGTTT
TCGGAAGTCAAGAATTGACTTGCGTTAATTCAGCTCTATTGTCAACCAGC
ACACTCTGACTTTGGCTTTTAACTTTATTTGAGTTGCACCAACACAATGC
AACGTGGAGCACCAGGCAGTGAATGCTGGTATCGTGCACTACACATAATA
AAACATGTTCTATACAACTCCAAATACAAAGCAACAAATACAATATAACA
CAATTAGTACACTGTAACTACATGCCGCCTTGTAAAAAAGAACAATTAAT
CAATCATTTACTCAAATCCTTACATCAAATAACCAAAGGCATTACTATAT
CAATACTGGTCTGCAACAAGTCAAAATGATATAGGCGTCGAAGAACGTGA
ATAATTACAATCAAGATTCGACAGAAATTGATATTGTTCATGGATTTATC
TAGATTATTGGGGTCAAGAGCTGGACACTGAAGAAAGCACGGAGACATCA
TACAAAAGCCGTGTCAGACGACGTATACGATTTGGACCTGGTCGCGAGAA
TCTCCCAGATGGCTGTGCAAGGATAGGCTTCGATATCATTCATGGAGAAT
CTTGTTCGTATTCGTGCGGTGGGGGTCATTCTGTATGTCCTAACAAGTTT
ACGTGTGGGGGTCCGGATTACCATTGTACGTGTATACAATTACGTGGCTG
GTGGTGCTAGTAAACACGTAACACACAGCTTAGTATAACTGCCCCTTAAC
GTAACGCACCAGCTTCTGTCATCGGTATAGCCTGTATAGCTGTCGTTAAA
CGATCAATTTATTTATTGATAGTGATAGGAATATTGTTACTGTTTGTTTA
TCCGCTAATGGTCATAACTTTATTTCATGCTATTACTTCTTTACCAGCAA
GTGTTTTGTTATTATGGGTTGGGTGCATATGCATTGTGAATTTAGAACGT
TTGAATATGAGATAAAAGTAACCACGTTGGTTTCAATATAATAAAAAATG
TTTATATTTGCGTATTCCATTCAGATCTGTTAGAATTACAAAAAAATTCT
TCAATATCACAAACTAATGTCGAAAATATATCGCGGTGTTTTAGTGCGTT
AAGTACAGTGCATCGAGATTTGGTACATCGATA Coding sequence (CDS) from alignment at Sc0000003:3603164..3612546+ >Blg01012.4 ID=Blg01012.4|Name=Blg01012.4|organism=Branchiostoma lanceolatum|type=CDS|length=828bp|location=Sequence derived from alignment at Sc0000003:3603164..3612546+ (Branchiostoma lanceolatum)
ATGGATCAGAAACCTGAAGTCAAAATAGAACCCGAGGCCAAGAAAACCGG
AACGACCTGGTCCCAGCCTCGTTTCAGGCTCGCCGTGGGATTGGCTGTAG
CCTTGCTTCTTGTGACCTGCGCAGTGGCCGCCGCTGGACTGATGATGTAC
TTTCGGGGGAAATGCGGAAATAAACGGTACACCATAAAGACCTCCGTGAA
TGGCCGGACGTTCACAGAGGAGGTGGAAGTGGACCGGGAGAACGGCATGG
TGGTGTACCGGGATGACGTCAGTACTGAGGACGGGGAGATCATACAAACC
AAAGAGGGAGTAACTGTGCTCTACCGCCGAGGTACCTGCTACGTGTTGGA
GGACGAAAATAACAACCAAACAACCGACATCGATGTGGTAGAGGCTGCGA
CAGAGTCCTTAGCTAATGCCGGTGATGTTCCGAGTTTTGACGTTGACCGA
GTCGTCTTCCTGAATCGGTCTGTTCCGGTTAGCCCTGAAGATGACGTCAT
CCTGCGAGCACAACTGCCACCCGTGTGTCGTGATGCTGCTCTGTACCGGG
TACAAGAGGAGGACGCTGGAGATTATTGGGGTCAAGAGCTGGACACTGAA
GAAAGCACGGAGACATCATACAAAAGCCGTGTCAGACGACGTATACGATT
TGGACCTGGTCGCGAGAATCTCCCAGATGGCTGTGCAAGGATAGGCTTCG
ATATCATTCATGGAGAATCTTGTTCGTATTCGTGCGGTGGGGGTCATTCT
GTATGTCCTAACAAGTTTACGTGTGGGGGTCCGGATTACCATTGTACGTG
TATACAATTACGTGGCTGGTGGTGCTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01012.4-exon-Sc0000003-1570713199:3603164..3603320 | Blg01012.4-exon-Sc0000003-1570713199:3603164..3603320 | Branchiostoma lanceolatum | exon |
| Blg01012.4-exon-Sc0000003-1570713199:3604009..3604161 | Blg01012.4-exon-Sc0000003-1570713199:3604009..3604161 | Branchiostoma lanceolatum | exon |
| Blg01012.4-exon-Sc0000003-1570713199:3604561..3604605 | Blg01012.4-exon-Sc0000003-1570713199:3604561..3604605 | Branchiostoma lanceolatum | exon |
| Blg01012.4-exon-Sc0000003-1570713199:3610346..3610429 | Blg01012.4-exon-Sc0000003-1570713199:3610346..3610429 | Branchiostoma lanceolatum | exon |
| Blg01012.4-exon-Sc0000003-1570713199:3610688..3610795 | Blg01012.4-exon-Sc0000003-1570713199:3610688..3610795 | Branchiostoma lanceolatum | exon |
| Blg01012.4-exon-Sc0000003-1570713199:3611183..3611339 | Blg01012.4-exon-Sc0000003-1570713199:3611183..3611339 | Branchiostoma lanceolatum | exon |
| Blg01012.4-exon-Sc0000003-1570713199:3611867..3612546 | Blg01012.4-exon-Sc0000003-1570713199:3611867..3612546 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:3603164..3612546 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01012 |
|
