Blg01013.0 (mRNA) - B. lanceolatum

Overview
NameBlg01013.0
Unique NameBlg01013.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:3093394..3096225-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01013.0 ID=Blg01013.0|Name=Blg01013.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2832bp|location=Sequence derived from alignment at Sc0000003:3093394..3096225- (Branchiostoma lanceolatum)
ATGGATCCCAAACCACCAGGATTGCTGCTGTTACTTGTAATCATCGGTGC AGCCTCTGCAGCTGAGCTGGTGCAGTATGGACAGTGTTCCCTCAACTTCA CAGAAGGCAAGATCATCAACTTGAGAAAGTCCAAGGAGTTGGGCGGGGCC GTCTTCCTTAGCTCCTTCTCGTCGGACAGTCTTGAGGACTGTTCTCACAG CTGCTGTAACGACACTGCAGGTGAGACAAGCACACCTGTGAAGAAAGGGT CATACTTTATATGATATATTCAAAATAGTTTTCTTTGGCACTGATTATCG TCAGTGGTGACATTCTACATACAAAACATTTATCATAGGTCATATACCAA CATAAAACCTTAACATTGCTAATCACTTTTTTCTAGCAATCTTAAGATCA AAACTACTATTATTTCTCTTAATGGCGGCCCTCATCCCTCATACTGTGAA GATATACTCTCATATCAACCAGTGGAGACATTACTATAATCGTTAGTAAT AATCTAATACTGGATATCCGATACTACTACTAATATTCTGGTTAGCTCCC CACACAGACCTGGTTTATTGGGCAGCGTGTTCATTCAGAGTGAAAGGTGC AAAGTAACTATAGACAATATAACAGCAAATTATGATTAAGTCTTCAAACA GTTTACAACATTCATGTCTCTTTTCCAGGCCAGTGTTCTGTAGCTGTTTA CCACAATGACAAGAACATGGACAACTGCTACCACATCAACTGCCCCGACC CCCAGACCTGTGTGTATCAGGACCTGGCAGGCTACACGCTGGCCATCATC AGCAGGGTGATACCACAGGCGGAGGCACTGGGGGGGACTGCCACAGGTTT GTTGCCTTCGTCAAGAATGTTATGTTTTGGCGCTGTGTGTCTGTTTGTGT GTCTGTTTGTTTAATTTGTGTGTGGACAGCATATCTTGAGAAGTTGTGAA TGAATTTTTATGATATTTGGTATGTTGGTAGGGGTAAGCAAAAGAAAGAA ATGATCAGAGCCCCCTAGCAGCTTTCTACAGTAATGCAGCAGAACTTTTT GTATCTCATGAAATGGACATGCTACGGTTTTGATTTTGGTTGGTAGATAA CTCTTATTTGTTAACAAAACATCAACAAGTATAATGATGACTAATAACAA ACATGATCAACTTGACAAAATATGCTAGTGAACATTGTTTGATTTAAGAA TTGATATATAGTGTAAAAGAAGATTTTAAAGAAGTTGATGGAAAGATATG CCAAGGTAACGAAGAACATAAGTCAACTTGTTTTTCCAGAAAAAAACCAT CACCATTTTACAAACTCTGAGACTCTGTCCATGAATCTGTCCATGACTAC AATGTATTCCATTTCCTGTTCTGTTACTCTGTTTGAATTAGCAAAGAGAG GAATCAAAGAATCAACTTCAAGCTATTAAAGGAATGTGCATAGATGTACT CATCATTCATGCCTTAGAATTTCTAAGACATGAAGCCATTTTATTCATAA CATTTTAGTTGTAACGTCAGAAAAGTACAATGTACACTGTTTGTTTGTTT GTTTTATTGGGATCTCCATTAGTGTTCAATTATTACAATCTTACACTATT CTTTCTGGAGTCCATTCACATTGATACATTAAAATCAAAGTACAAGAAGA AAACATATACAAATGATGGACAGTCATAACCAAGATCAAATTTGATCAAC TGTAACAACATGTTCAATAATAGCTTTCAATATTTCCCCACTTCTTTACC ACCTTACAGAAAAACCTGTCGTGACCACTAAAACAGCCAGTACCAAGTCC CCAGAGGTAGATGTAATTCCACAGGAGAGGGTGTTCCCCGAGAAGCAGGA AGAACCCACTACAACAAAACTAACCACTAAACAGCCTAGTACCGCTGCAC AGCAAGAAACAACAGCTGCAGAACAACCTGTCACAGAACAAAAGATATCA GCTACTGAACAATCCAACCCTGGCTCAGAACAACACACGACGGAACAAGC TGTTCCCGGTACACAACGGCAAACCGATAAACCTAACCCAGCTACACAAC AACAGCAGACGTCAACCAAACTGACCACCATCACTAGAACCACCACCACA CCCAAACCACTGGCAACTCACACCTTCACGCAGAAGCAAACCACCAAAAC CGTCACGACCACCGTTGTTGGTAAGACCGCAACGAAAGTCGACGAGATCG TGCCAACTACACAAGCAAGCAAAACGTCAGAAGTAGCTGCACAGGAAGTC AAGCAAACCACGCCACCTACGGTTGCTCCTACGCAAAAACCGACAACTAA AGTCCAAACCGTACCACCTACGAATCCACCACCATCAGAGAAGCCTTCTC CTAGCCCTGTGCCTAGTACTAAACCAAGCGCCACTACATCCAGGAAAACG CAAGCTGTTACTGTCAACACCAACCCAGCTCCTGAAGCAACTTCAGCTCA AACAAAAGCAAGCAGCACTGGTAAGAGCCCTGATGTTACAGCAGCTGATA CACAGCCTCATACAACCCCTACATCTAAACCTGCAGCAGCTACAACTAAA CAGTTGATGCCTGGAAATGCATCTAATGATGATGAAGCAACAACACAAGC TAGCCTGGTTCCGCAGGGCTCTTTAGGCCCTCAAGTCGCCCATAGAAATG AGTCAATGTCAGCAGCCGACAAGTTGGGAAAGTCGTCTTACGGCTCTCTC ATCGTGGCCATGTGTTTTGGACTGCTGTTCCTGTTTGCGGTGGTTGTTGT TGTCGGAAAGAGATGGTATGAAAGCTGGCAGAGACGGCATTACTCGAAAA TTGACTATTTAATCAACGGCATGTACAACTAA

Coding sequence (CDS) from alignment at Sc0000003:3093394..3096225-

>Blg01013.0 ID=Blg01013.0|Name=Blg01013.0|organism=Branchiostoma lanceolatum|type=CDS|length=966bp|location=Sequence derived from alignment at Sc0000003:3093394..3096225- (Branchiostoma lanceolatum)
ATGGATCCCAAACCACCAGGATTGCTGCTGTTACTTGTAATCATCGGTGC
AGCCTCTGCAGCTGAGCTGGTGCAGTATGGACAGTGTTCCCTCAACTTCA
CAGAAGGCAAGATCATCAACTTGAGAAAGTCCAAGGAGTTGGGCGGGGCC
GTCTTCCTTAGCTCCTTCTCGTCGGACAGTCTTGAGGACTGTTCTCACAG
CTGCTGTAACGACACTGCAGGCCAGTGTTCTGTAGCTGTTTACCACAATG
ACAAGAACATGGACAACTGCTACCACATCAACTGCCCCGACCCCCAGACC
TGTGTGTATCAGGACCTGGCAGGCTACACGCTGGCCATCATCAGCAGGGT
GATACCACAGGCGGAGGCACTGGGGGGGACTGCCACAGAAAAACCTGTCG
TGACCACTAAAACAGCCAGTACCAAGTCCCCAGAGGTAGATGTAATTCCA
CAGGAGAGGGTGTTCCCCGAGAAGCAGGAAGAACCCACTACAACAAAACT
AACCACTAAACAGCCTAGTACCGCTGCACAGCAAGAAACAACAGCTGCAG
AACAACCTGTCACAGAACAAAAGATATCAGCTACTGAACAATCCAACCCT
GGCTCAGAACAACACACGACGGAACAAGCTGTTCCCGGTACACAACGGCA
AACCGATAAACCTAACCCAGCTACACAACAACAGCAGACGTCAACCAAAC
TGACCACCATCACTAGAACCACCACCACACCCAAACCACTGGCAACTCAC
ACCTTCACGCAGAAGCAAACCACCAAAACCGTCACGACCACCGTTGTTGC
CGACAAGTTGGGAAAGTCGTCTTACGGCTCTCTCATCGTGGCCATGTGTT
TTGGACTGCTGTTCCTGTTTGCGGTGGTTGTTGTTGTCGGAAAGAGATGG
TATGAAAGCTGGCAGAGACGGCATTACTCGAAAATTGACTATTTAATCAA
CGGCATGTACAACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01013.0Blg01013.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01013.0-exon-Sc0000003-1570713199:3096006..3096225Blg01013.0-exon-Sc0000003-1570713199:3096006..3096225Branchiostoma lanceolatumexon
Blg01013.0-exon-Sc0000003-1570713199:3095380..3095547Blg01013.0-exon-Sc0000003-1570713199:3095380..3095547Branchiostoma lanceolatumexon
Blg01013.0-exon-Sc0000003-1570713199:3094056..3094466Blg01013.0-exon-Sc0000003-1570713199:3094056..3094466Branchiostoma lanceolatumexon
Blg01013.0-exon-Sc0000003-1570713199:3093394..3093560Blg01013.0-exon-Sc0000003-1570713199:3093394..3093560Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:3093394..3096225 -
Properties
Property NameValue
GeneIDBlg01013