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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:4475215..4481465- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01021.1 ID=Blg01021.1|Name=Blg01021.1|organism=Branchiostoma lanceolatum|type=mRNA|length=6251bp|location=Sequence derived from alignment at Sc0000003:4475215..4481465- (Branchiostoma lanceolatum)
TTATAATACTAATAAGAAGAAGACAAATGGAAATTTCTGCCCCCAAGAAT
GAGCTAGAGGATGAATAGCTTATATAAGGGGAGGGTTGCATACATGTATT
TTCAATGGCCTCACCTCACACTTTTTTGTATGCTCTTGCAGAATGTGATT
GACAAGACAGTTGAGAAGTACGGCAGGATAGACTGTCTGGTTAACAATGC
AGGCTCGCGTAAGTTGTGACTCTATGGCTAATGTTTTCTCTTAAGATTAC
TGTAAGTTGCAACCGTGAATATCTTATACAGTATGTATGTCAGAATAGAG
ATTACAATCTGGCATAATCAACGACTCTACCAGACTGAGTAGAGATCGCG
ATAGTGAAAGTCTCAGTCTAATGATAGAGATCGTTCTTGATTAGGATCTC
TGGCAGTACAATCGGTGATTCTACTGGTAGAGATCCAGATCGGAGTCTGT
CAACAGAAACTCTGATCGCTATCTCTAAGGTTCCGGGTCGGAGTTCAATT
GTGACCGGGGGTTGGGTCATGACCCGGTAATCTGCCGGAAGTGCGTGGTC
GTCACCCTGATTTCTGCCCGAGATTGCTTGGTGATGGTTTTAGCTGTGTA
TGAATATTTTGAATCTTCTGAAAAGCCCGTGAGTTGTAGTATTTTTGGGC
GCGGTGCAGTTGGTTCGCTATCGAAGCCTTTTTTGTATTAGTCCGCGGGA
ACGGTGATGCGGTTTTCTCGCCTGATGACCCAAATAGCATCGTTTTTAAT
GCATTTTCACCGAATTTGCGTCATCGGAGATTGCGAAAAAGTTATCACAT
GACTTTTTTATTTTTTTCATTTTTCAGAGACACCATTTACTAAGCTTTCT
CAGCATATATGCCGTGACCCCAGGAAAACTCGTTTTTTCCGAGCAGGTTC
GATCAAAAAAATGTAAAAAAATGATAATTTTCGGGTGCCAAATTTACCTT
TTACTATGGTTTCTACCCAAAATGAAGGGACAACGGACAAAACCGATAAA
TACATCGGAAAACAGCAGAAAACCGCTTTTCGACCATGTGATTACATTTT
CCGTCCTACTTTTCTCGGCGGAATTGTAGCCCGTCGACCTGAGGGTGTCG
GCCTACATACGAAATCGCAAAAAAACTCCGGTCCGAGACCTTAAAAGGAC
GGCAGCGGCTACGTCGANAAAAAAACTCCGGTCCTAGACCCTAATGGTAA
AATGGTCAATTTTGCCAGATCGCAAGCTCTACCCTAACATACATTATACT
ATGACCACTTTTTGAAGTTTAATTTTTCATTTATTGAAGATAATAGTTTA
CTCTTTTCACGTGTCCTGATCTAGATCCCCCTGAACAAACCATAGATGAC
ACATCAGTGGAAGACTTCAGGTCGCTTCTCAACTTGAACTTGGTCAGCTA
CTTCATCGCTTCCAAGGTGATACATTGTGTTTTACTGAATCAAAGTTGAA
CTGTAATTTCCAACACAATAAATAGGACTTACCCAAATTTCGACTGATTA
GCTACAGTCTTTGTCAAGGAATGAGCTGTCCACTGCTTCTGTGACGTCAC
GTTATGCAGGTAGGACACGTGACTCGGTGAGCAGTTAGATCATATGTTGC
AGAATTAGTGTTTACAATTGTGTTATACTGTTGGATTCACTGGAGGGTGT
GTTTAAAGATTTAGTTTCAAAAGTTGCCATTCCAAGATTCACTCAATATA
GATGAAATTAAAAATGTTTGCAGTGGCTTTAATTTTGCTCTGACCTTTCC
AGTGCAAAATCATAACACCGAGAATGTGCGATGTAACATTACAAGGTAAT
ACAGTACTATAGAGCTGTTTCAACGTTAATCTGAAATACAACTAAAACCT
CCTTCCCTCTTCAACCAAAAAAGTTACTAAGTCCCTGTGAAAATAAAAGA
TCTTACAGTATAAATATACATTAAAACTTAAATAGATCTTTGCTTTGCTA
TTTTTCAGTTTGCCCTTCCACATCTGAGAAAGACCCAGGGCAACATCATC
AACATGTCCAGTCTGGTCGGGGTGATAGGGCAAACACATGCATGTGCCTA
TGTCACAACTAAGGTAGGCTGGAAATATGTTCTCAACTATATAATTGATA
TGCGCATTTCAATCATCCGTGAATAGTTTCATCAGGCTGGTAAATCACTG
ATAACAATTTGAAAGTTATTTGCACACAACCAAGTGTTAATACCTAGCTG
ACATTTCAGTGCTGATTTGCTGAATCATCACCACATTCTTCACACTGCAG
CAGCGACACTTACATGTAGCTGCAGTGCAAAGTGGAACCAGTTAATACTA
TAATGCTCGGAGGAAGGTGACACACGGTCACCAAAATGTCGGCCACTCTC
TGGTTGTGAACAATGAACTTAAGTTGTCCTGTATTTCTTGTAGGCTGTTA
CTTAAGATTGTTTTAGATTGTGTTGGCAATCAAAATAGGAGAAAACAGCC
CATTTATAGTTACAGAGGGCTACAAAACAGACAATCTAAGAAATTCAAAG
AATGGGAAAAATAACATTGTTTTCAGAGATGTGATCAACATCATGTAACT
TCTGCATCTAGAAATTTAAGATTTCCCTTTTTGCTCCATTTTTCAGGGAG
GGATCACTTCTCTTACCAGGGCCTTGGCTGTAGACGAGGCTAAGTATGGG
GTTCGAGTGAACACGTGAGTACTTTTTTTTAGTTTGATCAAAAGATTATG
ATAAGTTAAGAAGGGCAAATATAAGATTTGCACGCCATCACTTTGAAAGA
CTTACAGAAAGAGTTAACAAACTTGTAAAGCTGTTAAGATGGCAAGGTTT
TCAGCATAATGTAACTGTTACAGTAACAAATAAAGTTAAAGTCAAACATA
GCCTTGCACATACAATATTTCACTCCATGTAGATTTTTCGTCTTTCTTAC
CTTCTCCCTCCTACCTGTTACTATAAGTAAAACATATAGAATCCATAATA
TTGAAGATAATGCTGTTCTGACTCCACTGTATATGTTCTCTGGTTAGTAT
TTCTCCAGGTAACGTTTGGACCCCCCTATGGGACAGTCTGTCCAAGAGTT
CAGGAAACGCGGAGGCTATGATTAAAGGTGGCGAGGAAGCTCAGGTATCT
AATATTTTTTCTGTTATGTTATACTTTCATGTAAGTACAGTAGCATGGAA
CTCAACCCTACTTTATGTTAGAGCAGTATCTTCCCTCAGGGATATCCCTG
TGACTCAACTGGTAGCAGCCTCTTGGTTACAATTAGTTGGTACCCCGGTC
AGACCCCGGTTCAAATCCTGGGACATGACATCTTCGTTGGGGCTGCACTA
ATCTTTCGGAAGTGACGTAAATGTTGGTCCCATGTTTTGGGAGGTGACTC
AAACATGTTAAAGGGGAAGGGCTAGCAACCCCTTCCCTGCTACTGAAACA
GCAAGGAAACTAATGCTGCCCTGTGTGCCACTAGGCACTACAGGGTGAAC
AACAAGTACAAAAAAGTATCTTCTCTCACTGACTTCAAGACACTGATTTT
GGGAAATTGATCTTGCATTATTTTTTTTTAAATTCTCACCATTATGACTG
TGAGTTGCATTCTTGTCCTCAGCTCCTAGGCAGGATGGGAACCATAGAAG
AGGCAGGAAAAGTCTGTTTGTTTCTAGCAGCAGAGGCAACCTTTACAACA
GGTATGTACATGTAATGGCGTCGTGTGGCGTAACGGCTAGAACATTCGGC
CGCCAAACAAGGGAACCCGAGTTCGAACCCGGCTTGCCCCCAGCAAGAGA
AGGGGCATGCCCCGGTGTGTGTTGGTCCAAAACCTACAGTCCTACACATG
GGTTCGCCGTTAGTAATAGCCTCCGGCTAGTTGGGCAACCCTGGCATGTA
CATGCTGAACCAATAAATAAATAAATAAATAAATACATGTACAGGGAGTA
GGAGTTCATTGTTGTTTTGTCTATTGATTCAGATTTTCATCTACATTGAT
GTCCAATGTTTATACATGAAGATTTGGGTTCTGCAGAAATCATTTTTTTT
TTAATCTTCTTCAGGATTTAACTGAACTAAAACTGACTAGTCCCTTTGTC
AATATTGCAATTAGGGAACTATTGATGTGTTGCTGGAGCCTGCAGAAGTC
ATTATATATGATTATAGATGACATGATATCATGTTTGTTTGACTTTTTGT
TTTCTGTCTTTAAGTCAGCCAGTGAAGGACTTTATGTGCTATTCTAACTG
GCATTCTGCCTAACCCTGTCAGCAATAGAGAAGTGGTAGCAAAAAGCTTC
ATTAAAGAGCGGTCCCCAGAAAGTGCGAAATGGAACGAAATGGACGAAAT
TCCTTGTATTCGCTATCTACTGGTATTTCATTTCATAATGTTACATATGT
TGTTTTAGTTTGTTCCATTTCGTTCCATTTCGTTTTATTTCGTTCCATTT
CGCACTTTCTGGGGACCCATTAGAGAGCTAAAGATTAAACAAATGTATGT
AAAATTGTGTTTCAGGCATTGACATGCTTCTGTCTGGAGGGGCAGAGTTG
AATTATGGCCGCAAGACCCGTTTGGTGGAAAAGACCAACATCTATGAGTA
ACACCGTCTGGACAGATGAAGATGACACGCACGTGTAGATGGATAGGAAT
GTGGTACCTGGAATCCAGTTGTGAAATCTATGCCTGCCCCGAATTACCTG
AGGACCACTTTCCCTTTTCACACTCGGCAAAATCTCTGCGAATCAATTGG
AGTCAAATCTATTCAATTCGAATAGCTATCTATTCGGTTGCGTTCACACT
TTAGTGGACATGGATGTTCACACCTATAGAACGCTGCTGGTCAAGTTGAA
TCGATTCAGCCCAATCCACCTCTCAGAGGAGGATTTTCTATCTATGCGAA
TCAATCCTGAATTGGACTGTCCACATTCAGTAAGATATATTTGGATCAAT
AATGGAGTTGACCCTTTAAGCAAATTGATTTTGCCAAGTGTGAACAGGGC
CTATGAAGGATAGTTATCAAATACGTGTACAGTACAAAAGTTACTCAAGC
AACTGGATAGATTGAACGGCCAGATGTTTCAGGTGATATCCACCACCTTT
TGTCAGTAGCTGATATTTTGTCATCAATCTTCTTCCAGCTCTTCTTCCAA
TCGTAAGGCGACTAATGTTTAACTTTGTGAAAGTAATGCAACAGATATTT
GAAGTTTTTACAGCTGAATTCCAGTGTAAGAGTATGGAGCAAATGATGCC
TCTATATAATGAGTTAAAAGTGCCTGGCGCAGATCAGTTATGATATATCA
GTTGACCAATAAGATATATCTAAGAAGTTTGCAATGTATTACACTGGCTG
TTTGCTTTGCTGGAGACGATTTTTATACATGAAAAATTCAATTCTATATT
TCAGATGTTGCAAAGATGCTTGTAAGATAATTTGTTCAGAGGCCAAACCA
ATATTATGTCATGCTTCTAAGCATTTAGGAAATAAATGCGTAAAAAATTG
AGAGCCAAAAGATTGTGTTGAAAAGTATTAAATTCAAATATGTCTTCAAT
TAGTAACATCTCATTTGTTTTGGCAAGATAAATATATTGATTGAACAATG
CACGTTGTTGAAGAGTATACCATGATCTGTAATGAGATTCAATCTGCTAT
TATACAGTATAAGTATAACTGTAACAGTTGCAATATTTGTTGAAAATGTC
ATGATCAATATAACGCTACAATTAATTTTACATGATAATAAAAAATGCAT
ATTCAAAAGTTCTTACAAGAATGGTTAGCTTTGTTTGATCACTTTTCTTT
GCACATATATTTCAAGCGCTGTTTAAAGCTTAAAGTCTTATAAGGATACC
CATACTGTACTTATTGGCAATACAATAACTGTACGACAGTTCTAGGAAAC
AAAAACGATTTTTGAACACATGTACATTTTGTACTTGTACACTGCTATTG
TACTTGCTGGCACCCGGTTACACCGTACGATAGTTCAAGGAAACAAAAGC
AAATTTATTGACACAGGTATATCAATCCTGGGCTGATGACTCTGGTATCT
ATGGGTACATAAAATGGCAAATATGTTGCTGATAATCATCTTGTATCCGA
AGCTGCCAATGAATCGAATCAGTTCTTGTGAGCATGTAAACAAGAGGAAC
AAAAATCTTGTCAGGACTATATAAGTTCACTAACAATTGATGTCAAATGA
TATTGAGTCACAGGAATGTTTTAGATGGTTTGATAGATTTTATCCTAATT
TCCATACATCTTTTATAGCGAATGGTATTGTTAAAGACATCTCTGTTGGA
G Coding sequence (CDS) from alignment at Sc0000003:4475215..4481465- >Blg01021.1 ID=Blg01021.1|Name=Blg01021.1|organism=Branchiostoma lanceolatum|type=CDS|length=675bp|location=Sequence derived from alignment at Sc0000003:4475215..4481465- (Branchiostoma lanceolatum)
ATGAATAGCTTATATAAGGGGAGGGTTGCATACATGTATTTTCAATGGCC
TCACCTCACACTTTTTTGTATGCTCTTGCAGAATGTGATTGACAAGACAG
TTGAGAAGTACGGCAGGATAGACTGTCTGGTTAACAATGCAGGCTCGCAT
CCCCCTGAACAAACCATAGATGACACATCAGTGGAAGACTTCAGGTCGCT
TCTCAACTTGAACTTGGTCAGCTACTTCATCGCTTCCAAGTTTGCCCTTC
CACATCTGAGAAAGACCCAGGGCAACATCATCAACATGTCCAGTCTGGTC
GGGGTGATAGGGCAAACACATGCATGTGCCTATGTCACAACTAAGGGAGG
GATCACTTCTCTTACCAGGGCCTTGGCTGTAGACGAGGCTAAGTATGGGG
TTCGAGTGAACACTATTTCTCCAGGTAACGTTTGGACCCCCCTATGGGAC
AGTCTGTCCAAGAGTTCAGGAAACGCGGAGGCTATGATTAAAGGTGGCGA
GGAAGCTCAGCTCCTAGGCAGGATGGGAACCATAGAAGAGGCAGGAAAAG
TCTGTTTGTTTCTAGCAGCAGAGGCAACCTTTACAACAGGCATTGACATG
CTTCTGTCTGGAGGGGCAGAGTTGAATTATGGCCGCAAGACCCGTTTGGT
GGAAAAGACCAACATCTATGAGTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01021.1-exon-Sc0000003-1570713199:4481258..4481465 | Blg01021.1-exon-Sc0000003-1570713199:4481258..4481465 | Branchiostoma lanceolatum | exon |
| Blg01021.1-exon-Sc0000003-1570713199:4480050..4480141 | Blg01021.1-exon-Sc0000003-1570713199:4480050..4480141 | Branchiostoma lanceolatum | exon |
| Blg01021.1-exon-Sc0000003-1570713199:4479403..4479507 | Blg01021.1-exon-Sc0000003-1570713199:4479403..4479507 | Branchiostoma lanceolatum | exon |
| Blg01021.1-exon-Sc0000003-1570713199:4478802..4478869 | Blg01021.1-exon-Sc0000003-1570713199:4478802..4478869 | Branchiostoma lanceolatum | exon |
| Blg01021.1-exon-Sc0000003-1570713199:4478372..4478468 | Blg01021.1-exon-Sc0000003-1570713199:4478372..4478468 | Branchiostoma lanceolatum | exon |
| Blg01021.1-exon-Sc0000003-1570713199:4477815..4477893 | Blg01021.1-exon-Sc0000003-1570713199:4477815..4477893 | Branchiostoma lanceolatum | exon |
| Blg01021.1-exon-Sc0000003-1570713199:4475215..4477000 | Blg01021.1-exon-Sc0000003-1570713199:4475215..4477000 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:4475215..4481465 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01021 |
|
