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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:4807254..4813144+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01027.4 ID=Blg01027.4|Name=Blg01027.4|organism=Branchiostoma lanceolatum|type=mRNA|length=5891bp|location=Sequence derived from alignment at Sc0000003:4807254..4813144+ (Branchiostoma lanceolatum) CTTAATTCCTTTTAAATCAGCAATTGTTGACGAAGGTGCAATATCATACT
GCGACAATCAAATTCCAGCACCCACTCAAAGGCCGCAGCGGATCCTAAAA
TGCCCGTACTGCCAGTATCTCGCCATGAAGTCATCCCACCTGAAGAGACA
CGTACGAAAGCACACGGGCGAGCGGCCGTTCAAGTGTCCTCACTGCCACT
ACTCCGCCATGCGTAAGGAACACCTCCTTCGACACTTTAGCTTCAAACAC
AAGGAACTGTTACGAGTGTCGTGCCAGGTACCGTAAATCCATTTAATGTT
GCGGTTGGTAATTTTAGCGGTTTGGGGAAAATGAGTAGTTCACTGCATTT
GATTTTGACAGTAGGAACAAATATCGCTGTCTCAAATGTCAGTGTTCATA
TAGTTGCGATGATGACATTTTAGCGGTTGACGAGTGACCGTTAAACTTAA
AAGTAGCTTGAATTATGTTACGGTTAACAAATCAAGAATTACAGTACTTA
TTTAGCTTTAGTAATTGTATGACTGTTTCTGTGATTTCAAAGTTATTTCT
CTTGAAAGTCATGCAAGTTTTTGAATGAAAAGTAGTCACTGTGTTCTGCT
GCTTCAGTGCTCTGAACACACTGCAGCTGCAATCTGTCTTTCTTCAAAAC
TTTCACTTTGTACAGTTCATCACAAGCTTCCTTAGCTCCCGTAGTTTTCT
TTACATTTCAATAAATGTACCCTAGATTAGCTATAATTCAGACTTTTGAT
TGCCTGCTTGTAATAAAGTTCTTTTGAAATTGAAATTTGACAGGAGTGCA
GGTACCGAACCACGGACGAACAGAGTCTCAACCTCCACCTGAAGCTCTCC
CACCCAGAAGTCTTCAACCAGGTCTACAAGTGTCGGGAGTGCGAGTTTGA
GTCGCCGCGGAAGTCGCAGTACGTAGAACACACCAAGGTCCACCGTGTGT
GGGAGTGTCCCATCTGCAGCTACAGCACACAGGTAACTGTGTTCCCTGTA
ACAGTGTATACGTATATATATATATGTACATTGTAATTACTTTGCGAACG
GGAATGCACCTATAGGCAGCAATACCTGTGCTGCATTGCTATGTGAACCT
GTCAGAATTGCCTTGAGGAAGGTGACAGATGGTCACCAAGACGTTGGTTG
AATAAATCACTTGGTTGTGTAAAAAGAGTCTTTTTATTCAGTGACTTAAA
TTGGAATCACACAGGTAAGTATACAGTCCAGTGCTGTCACATACATACAC
CCTTTTCCTTGTCCCATCCTCATCTTGAGGGTTGGGGACTATGGTCACTT
TCAGCACCATCTATATCTGTATAGCTGGTATAACTGCCCTTTGGCGTAAC
ACACGCGCACCATGCAGCTTTGCAGGCATGTGACATGGCAGCATCTGATA
TTACTGCTAAATCACAATGTAATCACAAGTAAATGACCTGTCACACCTAA
CTTTTCTTCATCTAGCTGCAGGCATTCTTCAAAGCTGTAAATATTAATGA
ACCTGTAAATACTGTACATATCGTCTGTTTTCTCTGTCACAACCAGTGGA
AGAGTACAACTCAACTGTTCATTGAGTTCAGTTGAAATAAAGTGGTTCAT
GATCATTTTCACTTTCTTTCACTTTCACCCAGGATTGGATGACCTACAGA
AGACACAAGCGGTCCCACACGGAGGAGAGGCCGTACACATGTCCAATGTG
TACATACACCGCAAAACTCAAGGTAAAAGATATGGCTTTGCGTGATTCTA
TCCTTGTTTGAAACTTTACCTGTGAAATGTTGGAGTGGGCAAAAAATTAC
TGTTTTGAGGAAGAAAGATAAAGGTGCAAATTTCATGGAACTTATACCGT
CATTCTCCTTTTTCCCGCCCAGTATTTGTTCAGCCATTTTTCCATCCATC
CATCCCCATCTATTCCTTCATTTATTCATCCATCCATCCATCCATCCATC
CTTCCTTCCATCTATCCATCTGCTATGAAGAATCAAATGACTTCAAATGG
CCATATACTTAACTGTCAGTTATTGGTTTGTAGGTTGACCTTGAGCGACA
TATCCGTGCCCACACCGGCGAGCGACCCTTCACCTGTTCGCAGTGCAGCT
ACCGCGGAGCACGGAAGGACAGTCTAGTCCGGCACATGCGCACGCACACG
GGCGACAAACCCTACAAGTGTCCGCTGTGTGACTTTGCCTCTGCCCAGCA
GGTAAGGAGTTGTTTTAATGCAGATACAATGCAATAATAGTTATGTACAA
ATGTATTATTTAGCTACCGAGGAGCGCAGAAATGACAGTCTGGTCTGACA
CATGCGCACGCACACGGACGACAAACCCTACAAGTGTCTGCTGTGTGACT
TTGCTGGCACAAATGTATAAGTTATTAGACAAGTTTGTCATTTGTAAGTC
ATTGGAGGTTTTCTAGTTGTCTTGGTCGAGGTAAAGTAAATTGTAAAGGC
TGTCACTGTGTCAGTAGTGTGTGTATGACACTTTTGTGTTCAATCAATAG
CGACCCTGCCTTTGGATCAAAAGGTCAGGAGTTCGAATCTCATTGCTGAC
ATGCGCATTACTGGAAAGGGTCATAATCCTTAAAACGTCACGTTACGTTA
CGCCGTGGTTCATTGTGCTTGTCGAAAAGAGCTAGGGGAATTTCCCCTGT
AAATACTTTATACAGTGTCTGTCACTCTCTGCCATGACCAGTGGAAGATT
GAGATCACTTTCATTGTTTTACCCCCAGGGCCATCTGGTGACCCATATCC
GGACCCACACGGGTGAGCGCCCCTTCACGTGTCCGTGCTGCGAATACGCC
TGCTGCGACCGGTCCAGTCTGGTGAAGCACGTCCGAATCCACACCGGCGA
ACGACCCTACAAGTGCCCCCACTGCCCCTTTGCAGCAATCCGAAACCAGG
ACCTGAAAGGTACGATGTTAGAGACAAGATGTCAATTAAGGGTTAATGAC
CCGCCCCAAGGTGTATATGGTGTCATAACGCCTGGCCATGTGCTATAACC
ACCGAATAAAACCACCGAGTGAGCGAAGCGAACGAGGTGGTTTTATGAGG
TGGTTATAGCACCTGGCCAGGCGTTATGACACCATATACACCGAGGAAGA
GGCGGGTCATTAACGTTATCATCATATAGCTTATCCAAACTGACGCATAT
AAGAGTAGACAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCTCG
CTGGCTGTACTGCAAGTCGGGCACGTTGATCGGGTCATAGGAGAACACCA
AAGAAGAAGCAGCCACGGGTGGCAGGCCATTGCACTTGAAACATTCGAAA
ACTTTCAATGACAATTGCACAAACGTTTCAGAATTAGGAAAATATGCTTC
TATTGCTAGCGCAGGCTTATTAGCATATCATTATCATGACCCCGAAAGCG
GTCTCGGAGCCAGTTTCCTCTTTACACACAGATCGGAACCGCATCGACCC
CCCGCTGATGTGGACTAGACCAGGGTTGGGATGTGGTCTGGTGCGGTTCC
TGGAGAAACCGGATTCTCCTCTTTAGACTGGGACCGGGAGGCGAACTAGT
CCGGGTAAAGTGGACTAGTGCGGGTAAAGTAGACTGTGTGTAAAGCGGCC
CTTAGATAGAACGTGGTTTCTTTGGCCAACAGCAAATGGAACACGCGGAT
ATTTTGGGAATTTAAAATTTGTTTTCCCTTTTTCATGTATTCTAAGGAAA
TTTTTAGGAATTCTAAGACAATAAAGATTTTTTAAACAAGGTTAAGAAAA
AGATTCATCAAATAGATAGTTATTACCCCCTCTACAAAATGCAATGGTTA
TAAAGATTTTTTAAACAAGGTTAAGAATAAGATTCATCAAAAAGATACCC
CCTCTACAAAATGGAACAGTTGTGTTCTGACATGATGTCATAAGTGGTGT
GTTATGGCGTGATAATAGACCACTTATTGCGGGCAATGGAGGCTTCTGAT
TGGTCGACGCCATCTACCTATGTGATAATATCATGTAATCCCTACTTTTG
ATTCTATAGTACAAATGTACTTATCTATCTGTTTATGAATCTTTAGGGTA
GTCCTTTCAGTTGCAATTCAGTCATATTTTTTTCCTTCAGACCACATCAA
CATCCACACAGGACAGCGCCCGTACAAGTGTACCCAGTGTTCCTACGCAG
CGGCGGACCGTTCCACGCTACGGACTCACACGAAGAAGCACGACCGAAAA
GCCCGCTTTGCCTGTAAACAGTGTGAGTTTTCCTGCGCCTCCAAAGCAAC
GTTGGTTAAGCATCTCAAGAAGCATAAAGGGACAAGACCTTTCAAAGTAA
GTAGTATGCTCTAATAGCAACAAGTACTATTCTTCTGCAGTGGAAGAGCT
AAATGTAAGTTATAATTAGGTTTAGATGTCCATTATGTAAAAACTTACAT
GAGATTCTTTGGTTTTTTGAACTAGAGTGAAAGCTTCAATCTGGTAACGC
TGAAGAAGAGTGACGGATGTCACTCAAAACGTCTGGAAGTAATCTCTGTA
ATCTTTCCAGTCATAGAAATTGAATTGTTAACCTGGATGTCTAACCTTCA
GATCAACAAGTGAAAGAAGTGAGTGAACATTTATTGCTATGACCTTAACA
TTTGTTTTTACTTTCCAGTGCTCAGAGTGTGATTACGCAACTAGCAACAA
AGCCTGTCTTAAGAAACATCTTAAACAACACGACGTAGACACCTTATCTT
GCAAGATCTGCAACCGTGAATGCGACAACTAACAGGAGCTGATCACCCAC
GTTGCAACCCACATCAAGAAAGACCCTGAGTGCCCCCCTCCCCAACATGA
CGGCATCACGACAGAAACCCAGGATAACCTTGAAAACCATTTGTCTTTCC
AAGATGTCACTAAACTGGAGGATGAAGGGTTGTCAGAAATTAAGGAAGAG
GAAGATGTACACCCACAGAGTACCTGGACAGGTTAATAAAGAGGAGATGT
CACCTTTTAAAATACCTGTAAAGGTCAAGGTCAAGTAAAACTTTGCAATG
TAATTCACCAGGGCTAGTACAATGGTACAATAGCTTTGCTTAATGTGAAA
AACCATGACCAAACTTACCAGACTTCTTATGATTTTAGATGATTAAAGTG
GACCCTATATGTACATTGCTCCGTTCATGGTAGTACAAGGAGAAAAGTCC
CATCAAGTTGGTAAGTCACTGGATAACAAAGTAAACAGCAATGTCTACGT
AATGGCAATGTAAAATATACACAGTTTATTATTTTTTCCATGGACCGATT
TTCTGCAATTTCCTGTAATATTCACAGTGCAAATCATTGAAATTATTTTA
TACATAATCCATGTATGGCAAAACCTTTATTATGCTCCCTTTGTAATAGC
CATACTAGTAGGGCAGCCCTGGCTACGGTCCTGAACAGCCAAGGAAACCA
AATAAATAAAAGTCTACAAAGAACTTCTAAAAGAGGAGCATTGTTGTTAC
ATTATGATATAGTTTTACATCATAGCGTTTATGCAATACACAGTGTGTAT
ATACTTTTTACTTACTTTGGTACATGTGTATTTTTGTCATCTTTTGACAG
AAAGAGGGATCCGGAGCACAGTATGAACTGCTAGATGAATGTTATTTTTG
AGGTGTGTTACAATATGATTGAATATGAAAATCATGTGCAAAGTGTTACC
ATATATGTTATTTCAACAATATTGGATAATATTAATACAAT Coding sequence (CDS) from alignment at Sc0000003:4807254..4813144+ >Blg01027.4 ID=Blg01027.4|Name=Blg01027.4|organism=Branchiostoma lanceolatum|type=CDS|length=1101bp|location=Sequence derived from alignment at Sc0000003:4807254..4813144+ (Branchiostoma lanceolatum) ATGAAGTCATCCCACCTGAAGAGACACGTACGAAAGCACACGGGCGAGCG GCCGTTCAAGTGTCCTCACTGCCACTACTCCGCCATGCGTAAGGAACACC TCCTTCGACACTTTAGCTTCAAACACAAGGAACTGTTACGAGTGTCGTGC CAGGAGTGCAGGTACCGAACCACGGACGAACAGAGTCTCAACCTCCACCT GAAGCTCTCCCACCCAGAAGTCTTCAACCAGGTCTACAAGTGTCGGGAGT GCGAGTTTGAGTCGCCGCGGAAGTCGCAGTACGTAGAACACACCAAGGTC CACCGTGTGTGGGAGTGTCCCATCTGCAGCTACAGCACACAGGATTGGAT GACCTACAGAAGACACAAGCGGTCCCACACGGAGGAGAGGCCGTACACAT GTCCAATGTGTACATACACCGCAAAACTCAAGGTTGACCTTGAGCGACAT ATCCGTGCCCACACCGGCGAGCGACCCTTCACCTGTTCGCAGTGCAGCTA CCGCGGAGCACGGAAGGACAGTCTAGTCCGGCACATGCGCACGCACACGG GCGACAAACCCTACAAGTGTCCGCTGTGTGACTTTGCCTCTGCCCAGCAG GGCCATCTGGTGACCCATATCCGGACCCACACGGGTGAGCGCCCCTTCAC GTGTCCGTGCTGCGAATACGCCTGCTGCGACCGGTCCAGTCTGGTGAAGC ACGTCCGAATCCACACCGGCGAACGACCCTACAAGTGCCCCCACTGCCCC TTTGCAGCAATCCGAAACCAGGACCTGAAAGACCACATCAACATCCACAC AGGACAGCGCCCGTACAAGTGTACCCAGTGTTCCTACGCAGCGGCGGACC GTTCCACGCTACGGACTCACACGAAGAAGCACGACCGAAAAGCCCGCTTT GCCTGTAAACAGTGTGAGTTTTCCTGCGCCTCCAAAGCAACGTTGGTTAA GCATCTCAAGAAGCATAAAGGGACAAGACCTTTCAAATGCTCAGAGTGTG ATTACGCAACTAGCAACAAAGCCTGTCTTAAGAAACATCTTAAACAACAC GACGTAGACACCTTATCTTGCAAGATCTGCAACCGTGAATGCGACAACTA A
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg01027.4-exon-Sc0000003-1570713199:4807254..4807530 | Blg01027.4-exon-Sc0000003-1570713199:4807254..4807530 | Branchiostoma lanceolatum | exon |
Blg01027.4-exon-Sc0000003-1570713199:4808047..4808235 | Blg01027.4-exon-Sc0000003-1570713199:4808047..4808235 | Branchiostoma lanceolatum | exon |
Blg01027.4-exon-Sc0000003-1570713199:4808886..4808975 | Blg01027.4-exon-Sc0000003-1570713199:4808886..4808975 | Branchiostoma lanceolatum | exon |
Blg01027.4-exon-Sc0000003-1570713199:4809287..4809454 | Blg01027.4-exon-Sc0000003-1570713199:4809287..4809454 | Branchiostoma lanceolatum | exon |
Blg01027.4-exon-Sc0000003-1570713199:4809982..4810162 | Blg01027.4-exon-Sc0000003-1570713199:4809982..4810162 | Branchiostoma lanceolatum | exon |
Blg01027.4-exon-Sc0000003-1570713199:4811544..4811749 | Blg01027.4-exon-Sc0000003-1570713199:4811544..4811749 | Branchiostoma lanceolatum | exon |
Blg01027.4-exon-Sc0000003-1570713199:4812072..4813144 | Blg01027.4-exon-Sc0000003-1570713199:4812072..4813144 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000003 | genome | Sc0000003:4807254..4813144 + |
Properties
Property Name | Value |
GeneID | Blg01027 |
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