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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:7414785..7419693+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01033.0 ID=Blg01033.0|Name=Blg01033.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4909bp|location=Sequence derived from alignment at Sc0000003:7414785..7419693+ (Branchiostoma lanceolatum)
ATGAAGATTCACCTTCTGATACTTGCCTTTCTGGCTGGCACGGCCTGCGC
CAAGCCACTGAAGGCTGTTGAGGAGCCGGAGAAGACCCACGGCGATGCGC
ATGCGCAGGCAGCCGATGGGCAAGGGAGGACCTCTGGACTCGGTCGGCTG
ACTGAGGTAGGGCCGGTTCACTAGACAGAAACTACCGAACATAAAAATGC
AATACTTTAAAAAAAGTTGGCTTTACACATCTGTATTTCCAAAATTTATC
ACATATGTAGCAGCCACTGGGGAGGGGTTCCTCCAAAGGAGTGATAATAC
CCTGGAATGATGATGATGATGTAGCAGCGCGTTACATTATGAGGACACCA
AGTTAATAGTCCATACCTGATGCTGGTAATAATAAGTTTATTGCAAATTC
ATGCCCGAAGGCTAAATGCAAATAACATACATAAAAGAACAGTGTACAAA
ATAGGTATAAAAGCTGCTTATCTAAATTATACAAATGTAATTGTCTATAA
CTAGTGAAGGGTTTGACTTCTCTTTTGTAAGCAATGGAAGACGTAATGTC
CCACCTTTTCTATAATTTGTGGGTTTTTGGTAGTTAAAAGAAGAATAGTC
TTTTCTTTGTCTGTAAGCTTAGGGAAATTCGGATAGATTTTAGTGGTCTG
AATAGACAACTCATTTCGTGCATTATCATGAAATGAACAGTTTGAAATAA
AGTGTATTTCGTCTTCCACGGCATTTGTATTGCAATACTTACAAAGTCTT
TCGTATATAGGTAATTTTCTATACCGGCCTCTCTCTATTTCAAGAGGATG
AGCACTAACTCTAATTTTGCTAATGGCTGAGCGTAGATCAAAATCTGCAA
GATCAAGATAACTCTCTAAATTGTACATGGTTTTACATTTTGCATAGAAT
CTTAACTTACCGCTGTCGTTCACCAAGGTATGAAAAAATGATTGTATATA
TATATCTGTTAATCTCCTTCTCAGCGCTTTTCCGACATGTTCAGGTTTAC
AATGTGTATTACCGGAGTGCCACAAATAGGAATATCCATTGTAATCTAAT
ATGTCTTTAACGCGTTGTAACAATGTTCGTCTACGGGTATTCGTCGGAAG
ACTTTGCTGTAGATGGAGTGCGTCCGCTTGGAGGGGGTGTAATAATCTTT
GTTTCTTTCGACAGAACCCGGATGTTGGGCTAGGTCCAGGTTTTGTTGAC
CGGATGGCAGCAGATTACGTCACCTTACGACATGTTGAGGGATCGTTCAA
CGCTGACAAAATACCTTACGGTGTGTTTGGAAATTCTTTTGAACCAGAAG
AATCTATTTAAAAAAATCTATTTAAAAAATCAATCATTATGGTAGTTGAA
AACTTTAAAATCATGAGTGTTGTATTATCATGGTCGCCTGTTGGTTCCGC
ATGTTCATGATCTAGTAAATATAACAGTAAACAACATTAGAGTGGTACAA
TTTAAAGATTACTACTGGACAAATTACTGTAAAAATCGGACATTTCGGGC
GTCTATCCGACTGCCCTTTTTCAACGAGAAGGGCAGTCGGATGAACGCCC
GAAACGTCCGATGTTTATCGTAATTTGTCCAGTAGTAATGTTTAAATTGT
ACCACTCTATTTGCTTACCTTGATGTTAAACATTCATAAACGTAAGTAAA
CAACATTGTTATCATCACAGGTCCCTTGCGAGGCCCAGAAGAGCCAGCCA
ATCGGAACGTGCGTGCTGTGAGTGGAAGTGAAGGTTAGTTTTAGAGAACA
GTTATAAACGTGTAGTCTTACGTATTTGTAAGTATGTAATTTGGGACCAT
TGGTACCGGTATTCCCCAAACCATGCATATTGCTGTAAAAGGGTTTAAGT
AGTTTGTGTTTTTCTCTCTAATTCCATACGTAGAAGAAAGTAAAGTCGGT
TTAACAAAAACTCCATCGATACATTGAACCAGTTGTAGATTTGATTATTT
AAGAGGGATTGGCTTTCTACATGGGCTTCGAGTGGTGGCTAGATATTCGA
ATGGGGTCAACTAAGCAGTTTGAGTGTGTATGTGATTGTGTGTGTGTGTG
TGTGTGTGTGAGTGTGTGTATATATGAGTGTTTTTGTGAGTGAGTGTGTG
TGTATGTGTTGAACTGTGTGTCCTAAGATCCGCGATAGTTTGCCAAGGAA
AGTTAACCGTTCGTTGGTGTATGAACGTATGCTAATATACATTTGACATT
TATTCGATTTATTTGTAGCACGCTATCTTCAGAATTCCAGTTCTTGTACT
TAAAACGTGTCTACATTTCAATTTGATCCTGATAAGACAAAAGTAATCAT
ATTCCCTTTCCAGTTGATCCCGGATGGCTTAACGGACGAGAAAGCTGGGT
CGTGGACATCTTCCCCACATCGAACGAAGGCTGGCCTTGGAATGCCTTGG
ACTGTTCACCGGACACCGTGTGGGCATGGCCAAGTGCGAACCAAAAACAG
GGCAAGAAGCACAGGATAATCGTGGACATGCAGAAACGGCATAGGGTGTA
CAAGATCAGGGTCGTCCAGCTCGGATACCCCAAACTCGACATGAAGGACT
TTGTTCTGGAGAAGTCGACCGTTCACCCATATGTGTGGGAAGTCGTGGAG
AGCTCTGACGCTCTCCTGGTCAACACCACGGAGCCACAACACTTCGGGGA
TTTCGACGTGACGTCACAGTATTGGAGGATCACAGCGACATCTATGAAAG
GATGGCCTGTTCGCATAAGGGACTTCTGCTTCTTTGGGCACAAAGGTTAG
CATGTCCTTTTTCTTTAAGTGTTTTTGGCCCATCTGTCTGGGTGCGTGCG
TGTGTGTGTGCTTGCGTGTCCATCGCAATATCTTAAGAACCGGATTGTGA
TTAACCATCTTTGATGATTTCTAACATATACAAGAATTACAGAGAGATGT
ACACAAACAATGAACTGTCAATGATTCAAAATGGGAATATGTTAGCAGTT
TTAACCCTCATCCGACCGACACATTTTTTGCGACGAATCTGGTAGTATGG
GCCCAAATTTATTGTGCCCACTGAATATATTTCTGGTGGATCTCTATTGT
AATTATTGTACATATACTGTTTCATAGATCTATCTTCTGTAATTGGTAGT
AACAGGCGCAGTAAACACAGTAAAGCATGTTTGTGTTTCAGAAATGTACA
GTCCACAGTCCCTCACCTGCTCAACAGCAACTTACACTTCACTCGGCATC
AGCTGGATCAAGCATAGTGCACCCCTTGTCGGATACAGAGTGAACTACAC
TCTCATTGGTAACAGTCCTCTCGACGTGATTACAACAGACATCGGTCCGG
TAAAAGAAGAACACGTTCTCCGAGATGTCCAAGCTGACCAGGAATACATC
GTAACACTCGTGGCTGTTGGGATATATAAGGAAAGCTCACCAGTTAACGT
CACCTGTTTGACATGTGAGTAAGATAACACCTAATTTTGATGTCAACATC
AGTCTGGATAATTAGGTCTAAGCCGTGCACAGTGTATTGCATATTTTGGG
ACTCAAGTATAATTCTTATATCAATATGTGACCTTCTTTATCTAACAGTG
ACGCCCCCACCTGAGGACTTTCAGATGACATACATCACAGAGACGTCCGT
TACGGTCTCGTGGACGCAGAGGACCAACTCCCTCGCTATCCACCACAGGA
TCTGGATAAGGCGTAGTGATACTGCCGATAGCCTGTTCACACAGCTAGTG
CCCACAGGTCAAACTGATCTGACCTTTACTGACCTCACCCCTGATACAGA
GTATGTGATATCTGCAACAAGCATCAACAGGCAGAGCGAGGGGCCGGCAG
TTAACCTTACTGTTGGAACAAGTAAGAAAATATATTTTAATATGGTATTG
GTCATTGGTCATATCTTAACCCTCAAACACCCGAACCTATTTTTGCGACT
AAAATGACATTCAACGTTCCTTTATCTAACAGTGACGCCCCCACCTGAGG
ACTTTCAGATGACATACATCACAGAAACGTCCGTTACAGTCTCGTGGAAG
CAGAGGACCAACTCCCTCGCTATCCACCACAGGATCTGGATAAGGCGTAG
TGATACTGCCGATAGCCTGTTCACACAGCTAGTGGCCACAGGTCAAACTG
ATCTGACATTTACTGACCTCACCCCTGGTACAGAGTATGTGATATCAGCC
ACAAGCTTCAACAGGCAAAACGAGGGGCCGGCAGTAATCATTACTGTGGG
AACAAGTAAGAAAACGTGTTTTAATATGGTATTGGTCATTGGTCATATCT
TGATGTTTACAATACCCAATAATAATCTAAAAACACCCTTTATGGCCTTT
GGGCTGATTAAGTAGTCTATCTTTCTTGTTAAAACTGAACGACTTGGATT
TAATCAAATATTTCGTACCTTTGTATAATATCATATTAGTCATTGTATCT
AAGACCGCCAGAATAATAGCCGACACAAATACTGCCAAACGTTTATAAAA
AATAAATAAAAAATTAAAATAGGACATGGAATGTTTTCATATTGATGTAT
GAAAATTTGAATCATAGCATCTGCATTTTCCCCCTTTTTTGTCTATAGTT
TAACATAATGCATATGTTAGCACGATTATAAAATACTAATATGCTATCTT
TAAATTTAACTAATGAACACATTTTACCCGTTATGCTCAGAAACGGACAG
TCCAATGGCATTGGAGGTTGAACAGAAGACAACCAACACCATAACAATCT
CATGGTTACCACCTGAAGCTGTCCTTACCGCTTACAACATAACATACGCA
GAAAGTGGAAGGAGTACTACCATGATGACGCCAGGGGATGCAGACAGCTA
TGTACTGACAGATCTGGTTCCTGGTACTCAGTATGACGTCGACTTGGTGG
CCGTTAGCAGGGTGGGGAAGAGTATCGACATCGGTATCAGTGTTGTTACA
GGTAAGTGA Coding sequence (CDS) from alignment at Sc0000003:7414785..7419693+ >Blg01033.0 ID=Blg01033.0|Name=Blg01033.0|organism=Branchiostoma lanceolatum|type=CDS|length=1458bp|location=Sequence derived from alignment at Sc0000003:7414785..7419693+ (Branchiostoma lanceolatum)
ATGAAGATTCACCTTCTGATACTTGCCTTTCTGGCTGGCACGGCCTGCGC
CAAGCCACTGAAGGCTGTTGAGGAGCCGGAGAAGACCCACGGCGATGCGC
ATGCGCAGGCAGCCGATGGGCAAGGGAGGACCTCTGGACTCGGTCGGCTG
ACTGAGAACCCGGATGTTGGGCTAGGTCCAGGTTTTGTTGACCGGATGGC
AGCAGATTACGTCACCTTACGACATGTTGAGGGATCGTTCAACGCTGACA
AAATACCTTACGGTCCCTTGCGAGGCCCAGAAGAGCCAGCCAATCGGAAC
GTGCGTGCTGTGAGTGGAAGTGAAGTTGATCCCGGATGGCTTAACGGACG
AGAAAGCTGGGTCGTGGACATCTTCCCCACATCGAACGAAGGCTGGCCTT
GGAATGCCTTGGACTGTTCACCGGACACCGTGTGGGCATGGCCAAGTGCG
AACCAAAAACAGGGCAAGAAGCACAGGATAATCGTGGACATGCAGAAACG
GCATAGGGTGTACAAGATCAGGGTCGTCCAGCTCGGATACCCCAAACTCG
ACATGAAGGACTTTGTTCTGGAGAAGTCGACCGTTCACCCATATGTGTGG
GAAGTCGTGGAGAGCTCTGACGCTCTCCTGGTCAACACCACGGAGCCACA
ACACTTCGGGGATTTCGACGTGACGTCACAGTATTGGAGGATCACAGCGA
CATCTATGAAAGGATGGCCTGTTCGCATAAGGGACTTCTGCTTCTTTGGG
CACAAAGTGACGCCCCCACCTGAGGACTTTCAGATGACATACATCACAGA
GACGTCCGTTACGGTCTCGTGGACGCAGAGGACCAACTCCCTCGCTATCC
ACCACAGGATCTGGATAAGGCGTAGTGATACTGCCGATAGCCTGTTCACA
CAGCTAGTGCCCACAGTGACGCCCCCACCTGAGGACTTTCAGATGACATA
CATCACAGAAACGTCCGTTACAGTCTCGTGGAAGCAGAGGACCAACTCCC
TCGCTATCCACCACAGGATCTGGATAAGGCGTAGTGATACTGCCGATAGC
CTGTTCACACAGCTAGTGGCCACAGGTCAAACTGATCTGACATTTACTGA
CCTCACCCCTGGTACAGAGTATGTGATATCAGCCACAAGCTTCAACAGGC
AAAACGAGGGGCCGGCAGTAATCATTACTGTGGGAACAAAAACGGACAGT
CCAATGGCATTGGAGGTTGAACAGAAGACAACCAACACCATAACAATCTC
ATGGTTACCACCTGAAGCTGTCCTTACCGCTTACAACATAACATACGCAG
AAAGTGGAAGGAGTACTACCATGATGACGCCAGGGGATGCAGACAGCTAT
GTACTGACAGATCTGGTTCCTGGTACTCAGTATGACGTCGACTTGGTGGC
CGTTAGCAGGGTGGGGAAGAGTATCGACATCGGTATCAGTGTTGTTACAG
GTAAGTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01033.0-exon-Sc0000003-1570713199:7414785..7414940 | Blg01033.0-exon-Sc0000003-1570713199:7414785..7414940 | Branchiostoma lanceolatum | exon |
| Blg01033.0-exon-Sc0000003-1570713199:7415949..7416054 | Blg01033.0-exon-Sc0000003-1570713199:7415949..7416054 | Branchiostoma lanceolatum | exon |
| Blg01033.0-exon-Sc0000003-1570713199:7416455..7416517 | Blg01033.0-exon-Sc0000003-1570713199:7416455..7416517 | Branchiostoma lanceolatum | exon |
| Blg01033.0-exon-Sc0000003-1570713199:7417098..7417529 | Blg01033.0-exon-Sc0000003-1570713199:7417098..7417529 | Branchiostoma lanceolatum | exon |
| Blg01033.0-exon-Sc0000003-1570713199:7418333..7418491 | Blg01033.0-exon-Sc0000003-1570713199:7418333..7418491 | Branchiostoma lanceolatum | exon |
| Blg01033.0-exon-Sc0000003-1570713199:7418717..7418989 | Blg01033.0-exon-Sc0000003-1570713199:7418717..7418989 | Branchiostoma lanceolatum | exon |
| Blg01033.0-exon-Sc0000003-1570713199:7419425..7419693 | Blg01033.0-exon-Sc0000003-1570713199:7419425..7419693 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:7414785..7419693 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01033 |
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