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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:1429877..1438488+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01034.0 ID=Blg01034.0|Name=Blg01034.0|organism=Branchiostoma lanceolatum|type=mRNA|length=8612bp|location=Sequence derived from alignment at Sc0000003:1429877..1438488+ (Branchiostoma lanceolatum)
CTTCAATCTCGATATTTTCAATTGGTTCCGTCCAAACTACATAGCATGCA
AACGTAACAAATTTTATGTATAATGTCACATTTATCATTCATCCTTATAG
AATCAATATTTGTTAAAAGTGGACGTACTGAATTTAAATAAATTAAAAAA
GCGGCATGCCATATTTGCATACTTTGTGCAATCGTAACTCGTTCAGATGT
ATTTCTAGCGTTTGTATGCGGTAGAAGCGGGATTGGCCATCTTTGCGACG
AACAGAAAAAGTAGAAATCGACAAAAATGGTGAGTTGTTTTGTGCTAGGA
AAGAATGTATACCTTAGACTGTCATTTCAGAACGTGTATTGTTGTTTAAT
CTGATCTGTGACAGGTTTTGAGGTAATATTTTGCCGGCTGTCCTCTCAAA
ACGGCAGTTTTATACCGACTCACATGTGCAGTTGCAAGTCATGGGGGAGG
GGGGCGGCATGAGCAAAATCTCATTTTTGTACAAAGAAAGAATCATTATG
TGGCAGACTGTTATAGGATGCGTTGAAAAGTCATTCATTTGAGGAAACAC
TACTTAGACTGACTGTTGTGCTTAATTATAATTCTAGGGGAAACGTCGGA
ACACAGTCGCCTTCCCACAAAGAAAGAAAATAGCTGAATAGAAATATGTA
AATTCCAAGTTTCTGACAGTTTTAGACTAGAGTAGGGTATAGTTTACGGT
CTGGTAGGATGTTCTTCCAGTTTTGACATTGTTATAATCACGTAGCATAA
TTTTCTATAAATGCAGTGTCATAATTTCATGAAAGCAAAACCACTCTAAA
AGTTCATGATATGATATCTTTAATGTTTCTGAATTTTGTACCTTTTCCCC
TGCAGTTCCGTAACCAGTATGACAACGATGTCACTGTGTGGAGCCCACAG
GTATGTGTACCAACTTACCTCGTGCAAAGTAAGAGTAGATCATGGGAAAC
ATGAAGCAAACTGTTCTCTGGGGTTGGGGTTTTGTGCGCGTGAGAAATTT
GCGCGTGAAAAACTTGCGCGTGAAAAAATAAAGTTCAAGAAATGTGTCAG
AAAATGTGCACTACAAAATTCTTAGTCAGAAAAATGTTACCCCATGATAT
GATTTTGCATCAGTTTCCTGAATTTTGGGTTTGAATTTTAGGTCCCTTGG
GAATATCTAAGCTGACTACCAAGGGATTTAAAACCTTTTTGGAGGTTTTA
AGCTTAAAACTTGAAATAAGATGACCCACAATGGAATTAAGTATTTTATT
GTTGCATTCTACAGTTCAAAATGTTGTTCTTTCAATCTCCAAGTGATTTT
TTAGTGATTTTCAAATGTTAAGTTTTCACGCGCAAAAAAGTTTAAATTAG
TAATAGAATGGAGAAAAGCTTCAAATAGTTACATTTTACAATACAAAACC
TTATATAAGTAAGTTGACTATGTATTTCTTAAAGATTTAAGTGATTTTCA
AATCTTTAGGTTTCAAGCCCCCAAAAGTTTAACTATTCCCAAGGGACCTA
TTCCCAAAGGACTAAAAAATCAAATGTTTTCAAACCATAAATTCAGGTGT
CAGATGATAAATTGTATCATGGGATCACATTTTCCTGTCTAAAAAAATTA
TACTGCACATTTTCTGACACATTTTAAAGAAATAAATTTTTTCACGCGCA
AATTTTTCACGCGCTGAAAACCCGTTCCCGTTCTCTGAGGTACACATCAT
TTAGAAAAAAAAATTGTATCTAACTAAAAATGGAAACAGATTGCAAAAAA
TTATGGGTGAATACTGTGTTAGGTTAGATGAGGGTTGAAAATACTGGGTG
CATCGGACCTTTTGTGATAGTGTTTAAGTCCTGTTGTTTGTCTGTATATT
TCATTATTTGTTTGTTTGTTTGTTTGTTTGTTTCAGGGTCGTCTCCACCA
GGTGGAGTATGCCATGGAGGCCGTGAAGCAGGGGTCGGCCACCGTCGGGC
TGAAGTCCAACACTCACGCCGTCCTGGTCGCACTCAAGGTGGGCAACGTC
TTGGAGACATTTGTCAGATTGTTTGTTTGTCCTTTTATTTATTCGTGAAA
AAACTCAATCGGCAACCTACACTTGGCCAACAAAACTGACAATTGATTTA
GAGAACTGCAATTTTGCTGCACAGAAAAGTACATAGCTAGATTCTGTAGT
AGATCACAGTCAAGTCCTATTCCAGCATGCAGAAGGCAAAATCTTGTGTT
CTCCTGTTTTACTAGTAGTAGTACATAACATGAAAGTGCTTGGTGACAGA
AAAGGCTTTAAGCCTGAGGGCTGGATTATGTAAAAAAAAAATATCCACAG
AAATGATCAACGAGTTACATGACAACAACTCTTAGACAAGACATAGCATT
TTGGTTGTGAAAGAGAAAGTGGTTTAAGTCTCGAAAGATTCCAAGAACTT
TGTTGTGCGTGTTACAGATATTCTGTAACCCATAGGGGTGGATACCGGTT
CGCTGGACCTGATTCGGACCTTTATAGCATCCAAGAACCGAGTCCAAAAA
AACCTGAAAGCCTACAAGTTGAGTCCAAAAAAAACTGAACAAAGTACAAA
TATATGTTTCTATTTTGTTAGATAAAAAGTGTTTTGAGTCTCCCCTCTGA
CAAAAAAGGCATTTAAAATAAGTGTAACATTCAAATCTCAAACACTGGTT
TGTCTTGAAAATCTTCTCACCAAGAAACTTTTATAGTCGTGCGTGTCAGT
ATTAATTCTCTATGCTTAATATTGGTCTATTAAAACAAAACATCAACCGC
ACAGGATCAGGTCCAGGTTCAGGTCCGGACCTGAACCTTAATCTCTGGAC
CTAAACTTGGACTTGGACCTTATTAAGCCGAACCGGTATCCACCCCTAGT
AACCCATGATTCTTCCTCTTGTTTTAGAGAGCGCCATCGGAGCTGTCGGA
CCACCAGCGTAAAGTCATCCCCGTCGACGACCACATCGGGGTGTCCATCG
CTGGGCTCACGGCCGACGCTAGACTCCTCAGGTACGGCTCTATCTGTTGC
CATGGCAACCTGAATTGTGAAAAGATAGATTATGTTCTTTTGTTCTAAAA
TTGTACATTTCAGTGACAAGTACATGCAACAGTTACTACTTTTTTTTTTT
GTGTGCAGTACCATGGTCCTATTCTGTACAAGACTGACAGTATAGTAGAA
GTACAGTCAAACTTGTATAAGAAGACCACCATGGCGACCTATAGAAAATT
GGTCTTTTTAGACAAGTGGTCTTCTTACGGTAGTACAAGTAATGAATACA
TGAAGTGTTGCCAATCTTTTTACCATTGTTTTCATCATTGTTGTTTCTCC
TGGTCAGAGAAAGTCCAGGTGTTGGCTTCCCTTCCCCCGGCACTGTAGCT
GTAGCTATATAGAGAAACGCCTGTTCCTGTTAGTGCAAGGACAGTTCCAG
ATGTTGCACCTGACTGATGACAGTGTTCTCACAAGAAAGCAGGCTTATGT
GTCTGTGCTTTTTTGTGTTCATTTTGTTTTCTGTTTGCAATCAAAAATCA
TGATGTGATATGTACCAAAAAAATCCCAAGTCGTAAGCATGCTGAAAACT
GTCAGTGAGGAGGTTAGGAAACATGGTCATTCCTTGTGTACATGTTGTTT
CTTAGCAGGTATGGAGTGCCCTAAACAGTGTGGCAGTTAATGATATTACA
GTATGACTATGAATACTTCTTCAAAATCTAACCATTGTCTCATGTCTGTT
GTTCTACAGCAAGTTCATGCGTACGGAGTGCCTGAACAGCCGGTATGCGT
ACGAGAGCCCCCTGCCCGTATCCAGGCTGGTCTCCACCCTTGGCAACAGT
ATCCTTTCACCGATGGTGGTTTGTCAAGGTGTTAGTGTTCAGGGCTGGAA
ATACTGGGTGCATATGCACTTTTTTGCACCTAAAGTAGACTGATCCTGAC
TGTCAATCACAAATACCAGTAGCAGTTAAGCCAATGAGAGAATGGCTGCA
TGTTGGTCAAGTATTTACATGTTAATGGTTTTACTTTGTATTTCTATGTT
TTGACGGAGGTGTGCAGGACTATGGGATTACTCTATTGAAGCTGTGCTCC
TAATTTTGACTGGGTGCACCTAGATATATCTGTAGCGTGACGTACATAAT
GGTACTATTCTACTCTACTATACAACATATTCTTGACATTTAAATATCAG
AGAAAATAGCAAAACCATTGTTGTATTAATTGTTTAAGATTTTGAAGTCA
GCTACAGAATTTCAGATTTAAGTTCAGAAGGGAGGCAGTAATACAAGATA
CAAGATAACTTTATTGGAAATCGCAGTGTTGCCACTGAATTAAAACCAAT
TTACAAATATATCAATCAATCAGTAAGTCAATTTACAAACATATCAATCA
ATTAGTCAATCAAAATAGACGGCGCAATACCCAGAAGTGCAACCCCTTGA
CTGTGTCCACTATGTGAAGTGTGTCGAGTGTTTGACTCCTTAACCCTGTC
CCAGAGATGCAGATCTGCACGCAGCGCTACGGCAGGAGACCCTACGGGGT
CGGGCTGCTGGTGGCAGGTTATGATGTAAGACTTCCACCTGTTTATAAGC
TGTAATGTGTGTATGCAGATGTGGTATTCAAATTATCATTTAAAGTTGCA
TTTAGGACCGTAAAAGCCAGAACAAATAGGATTTGAAAAGTAGTTAAAGA
CTTCTTTTTCAGAAAATTAGACTTCCAGACTTTATATTAACACAAAAGGA
ATAATTGCACTTACAAAGTTGTTGTTTTGAGTCTGTTGAGTTATCAGTTA
ATATTATGGAAATGAAGACACCATGATTTGAAAAGAAGCAATCTTTTTAT
GTAACTGACATGTGTATTTCAACCGTAACATTCATAACCATGTCAGAATA
TAGAGTCAGCCTTGATACATGTAGATAGAAATGTCTTTCAAGTCAAGTAA
AATTTAACTGACCAATGTATTGTCAGAATGGTATTTTCTAGCTAAGTACA
AATGTGACTGTACAGACATGGAAATGTATTTACCCTCCCCCTTTACAGGA
GATGGGTCCTCACATCTACCAGACCTGCCCCTCCTCCAACTACTTCGACT
GTAAGTGCATGGCCATCGGCGCCCGCTCACAGTCAGCAAGGACCTACCTG
GAGAGGCACCTTACTGAGTTCTTAGACTGTAAGTCAAGATGTCTTCCTTT
TGGTAGCGTGCGTAGTCCAGTGGTTCGCGATCTTGCCTCTGGCACTAGAA
GCCCCGGGTTCGATCCCCCGACATGCACGCTACCGGTAAAGATCGCAGTC
CTTATGATTAGGACGGGACGTTAAGCCGTGGTCCACTGTTCATTGTGCTT
GTCGAAAAGAGCTAGGGGAATTTCCCCGGTACAATGAACCTGTAAATACT
GTACATAGCGTCTTCTCTGTAACAACCAGTGGAAGATTAGCTCATCTGTT
CATTGAGTTCATTTGAGATTCGAGATCACTTTCCTTTCTTAATGTTGTTT
GCTTGTTTTGGAGTGCATGCACAGCAAGTCACATCAGAGTGAATGATGAG
TAGTAAAATTAAGAGATGAGTGGAGGAAACTGTGTTTTTTCCTTGAAGTA
ATGTGACAAATTCGAAATGTGTATATTTCAAACGGTAGTTTTGGATGATT
GGTACAACAACCACAAAATTAGTAGATAGAATGAGAGATAAGAATACATT
CAAAACGTTGATAGCTTCACTTGAATATGTCAGAAGTTGTTCCAATGTGA
TTTGATCTTTCCAGGTGCCGTGGATGACCTGGTACGACACGGGCTCCGCG
CGCTCAGAGAAACGCTGCCCAACGAACAGGAGCTCAACACCAAGGTGGGT
TATGGGGTAGTTATTAGACAATTAACCTGTACTGTACTGAGACCACCCCC
TTTTCCAGACAAGATAGCATGCTGTATACATGTAGATGAACCTGTAAGAG
TCAGAGTTGTATAATGTTTATTTATGTCATATTAATCTTCTCCCTGGTGT
CTAACCCTGTAACCAAATCTTATGCCAAAGGTTTATTTTAGCAGGATCAA
GTTTATGTGACTTTAATACTAACTTAAACCTGGCAGTTTCCATTTTTAAC
CATCCCAATGGATACAATACTTATACCATATGCACCTTATACAGGGGTTC
ATCTAAATCAGGAAAGAGGGGTGCTGCACCCTCTTGTTTCAGCCCAGCGC
CCCCTTGTCAAATTCAGATTTTAGCTTAATATGAGCATACAGCCTTCACT
CAGCAATAGATTCATCCATAAATACATAGAATTCGCTCCCTTGCCTGTGT
GTGCTTCCTCTTGTTTAATTTTTTTTGTTTAAGTGCAAACCAACACGAAA
TGTTTTGACAGTTTGTTTAACAATGATGATTTTCCCGCTTGCAGAACGTG
TCTGTTGCCATCGTTGGGAAGGACACAGACTTCACCCTGTATGATGATGA
AAACGTCCAACGATTTGTATCCTTTTACATCACATCAGTCAACAGCACTA
GTTTAAGCCCCTGTCTCACATTCAGGACTTCCCCACGACTTTAAAGAATG
TTTTTTATTGGTCACTCAGAAATTACCCACAATGGCAGCCTTTCTAGCGC
TGAATTGATGCAGGGTTTACAGGTTTCACACACTAACACAACATATATAA
TATCTTATCCACACTTGCATTATGTGGAATTGTCACAAGGGTCTGGGGGC
AGCCATTCGGCGCCACCAGGTGACCTCAATACGACCTTCCCCAACCGAAG
TTAGGTACCCATTTACACCTGGGTGCAGTAAGGAAAGTCTTGTAAAGTAC
CTTTCCCAAGGGCACATGATCGGTGGCATGACAGGATTTGAACTCTGGAC
CTCTTGGTTCTGAGCCGAACGCTCTGTCCTTGCGCCACACGACCCCACTA
GGTTGCTAGGTTGGGAGTAGCCTTGAATGATACATCTATTCTAGCTTCAA
TTTGCTACTTCCATTGCATCAAAGTAGAAAATTACTTTTCCAACTTTCAT
TTTTTAAATTCAAAGCTAGCACAGATGACTTTTCAAGATTAGTTTGCAAT
CTCGCCAACCAACTGATGAACATGCTCACAAAATACATTGTATTTCTAGG
CACTATACATTTTGTCTACAATTTAAGTTGCCAAAGTTAATTTAGTTTGC
ATATGAAATATGTGTTCTAAGTACTGTTTGATTGTGTTTAATTTTGACTA
CACCATATACATGTACATGTGTACCTTAACCCTTGCACAGCTAACAGGCA
TCGAGCATGAGAAGAGAGAAAGAGGAGCCGTAAGTTACATTCTTTTAAGT
CGCTTTTCAAACAACAAATGCATATATCGGCAACAGACCCATGTAGCGAT
GGTATGTTACTCCAAATAGAAGTTAAACATGCACAAATTCAGATTCAGAA
ACACATGTCGCCGCAGTGTTTTTTAACCCTCTCCCTTGTTACCTCAGCCC
GCGGCCGCCATGGATGTAGCAGAAGGGCAGGAGGGCCCGGCTGCCGATGC
GCCCGCGGACCCACAACCCGAGGGACCTGACGCCATGGAGCACTAGAAAT
GTCTAACTGTGGTTAATCATTATAGAAATGTCTTACCTATGGTTATAGTA
ATGATAGGAACATCTCTTCATCACAGTCCACACTCGTTAGCCCCCCTTTC
CACCCAGCAATTGCTGATTGACTTTGGAATATGTAAAAGTATGATGTAAA
AGATACCAAAATAACAAAAAAAGATCAGTTCTTTATTTCTGAAATTCTTT
AGGTGACCTGTAAAATCTTAAGGCACTCAGTGGCTGCAGCCTGGAAAGTG
GGTGTAACTAGGATGGTTATAGAAATGATGTTAACTTCCCTTATCACAAT
TCATCTTCTATTCTCAAACAATTTTTACAAAATCAACTTTGTCAACAGCG
AAAAATGACTCACTCAAGAATAAAACTTTTCCACAGGACTAACAAGAATT
GAAGAAGTTGAAAACTTCTGCAAGTCACGTCTAAGATTTGTTATAATGTT
AACTTGACATGTGCTTTCCTATCTTGAGCTGTACAAGAACTTTCACAAAT
ATCAGCATCACATGTACATGTATCTGCCCATATAGTGAATAGGGCTAGTC
CCCAATGCAAACTTCCCATTTTTCAGTCAGATGATACAATTTATTCTGTC
CCTCAAAGAAACGCAGTTAAATGTCTGGGTACATTGCATATGACAAATAA
GCAAATGGGTCTAAACCCAATACCATTCTCCTGTTTATGTTGAAAATTAG
ACATCCAGATATAACATTCACAAGGTAACAGTTACTGAGGCAACTGGACA
GATTTTGTAAACGATCAGACATTTCAGGTAGTATCCACTACCTTTCGTCA
GTGACTGGACAATATCTTCGGTTCACCAGGCTGAGTAACTGTTACCTTGT
GCATTCTCTGGTTTCTTCTGTCAGGAAGTGACTTGTGCACCCTTCTGTCC
CTCTGTGCTGTTATTAGATGCTGAAATGAACACCCCCAGCTGACCTGCAC
TTGCAGATGTCTGTAAGCTTGTGGGCTGGTGCAAATATTAGTGCCAGGTT
TGTGTAGGGCTACTTCAAGTTGTTCATGGCGTTCGGTTCTTGAGCAGAAA
TAGAAATCTGGACATCCTGCAGCTACGTGTAGGTGATATGAATAAAGAAG
ACAGTGGCTAAC Coding sequence (CDS) from alignment at Sc0000003:1429877..1438488+ >Blg01034.0 ID=Blg01034.0|Name=Blg01034.0|organism=Branchiostoma lanceolatum|type=CDS|length=834bp|location=Sequence derived from alignment at Sc0000003:1429877..1438488+ (Branchiostoma lanceolatum)
ATGTTCCGTAACCAGTATGACAACGATGTCACTGTGTGGAGCCCACAGGG
TCGTCTCCACCAGGTGGAGTATGCCATGGAGGCCGTGAAGCAGGGGTCGG
CCACCGTCGGGCTGAAGTCCAACACTCACGCCGTCCTGGTCGCACTCAAG
AGAGCGCCATCGGAGCTGTCGGACCACCAGCGTAAAGTCATCCCCGTCGA
CGACCACATCGGGGTGTCCATCGCTGGGCTCACGGCCGACGCTAGACTCC
TCAGCAAGTTCATGCGTACGGAGTGCCTGAACAGCCGGTATGCGTACGAG
AGCCCCCTGCCCGTATCCAGGCTGGTCTCCACCCTTGGCAACAAGATGCA
GATCTGCACGCAGCGCTACGGCAGGAGACCCTACGGGGTCGGGCTGCTGG
TGGCAGGTTATGATGAGATGGGTCCTCACATCTACCAGACCTGCCCCTCC
TCCAACTACTTCGACTGTAAGTGCATGGCCATCGGCGCCCGCTCACAGTC
AGCAAGGACCTACCTGGAGAGGCACCTTACTGAGTTCTTAGACTGTGCCG
TGGATGACCTGGTACGACACGGGCTCCGCGCGCTCAGAGAAACGCTGCCC
AACGAACAGGAGCTCAACACCAAGAACGTGTCTGTTGCCATCGTTGGGAA
GGACACAGACTTCACCCTGTATGATGATGAAAACGTCCAACGATTTCTAA
CAGGCATCGAGCATGAGAAGAGAGAAAGAGGAGCCCCCGCGGCCGCCATG
GATGTAGCAGAAGGGCAGGAGGGCCCGGCTGCCGATGCGCCCGCGGACCC
ACAACCCGAGGGACCTGACGCCATGGAGCACTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01034.0-exon-Sc0000003-1570713199:1429877..1430155 | Blg01034.0-exon-Sc0000003-1570713199:1429877..1430155 | Branchiostoma lanceolatum | exon |
| Blg01034.0-exon-Sc0000003-1570713199:1430732..1430776 | Blg01034.0-exon-Sc0000003-1570713199:1430732..1430776 | Branchiostoma lanceolatum | exon |
| Blg01034.0-exon-Sc0000003-1570713199:1431763..1431864 | Blg01034.0-exon-Sc0000003-1570713199:1431763..1431864 | Branchiostoma lanceolatum | exon |
| Blg01034.0-exon-Sc0000003-1570713199:1432754..1432857 | Blg01034.0-exon-Sc0000003-1570713199:1432754..1432857 | Branchiostoma lanceolatum | exon |
| Blg01034.0-exon-Sc0000003-1570713199:1433586..1433674 | Blg01034.0-exon-Sc0000003-1570713199:1433586..1433674 | Branchiostoma lanceolatum | exon |
| Blg01034.0-exon-Sc0000003-1570713199:1434331..1434401 | Blg01034.0-exon-Sc0000003-1570713199:1434331..1434401 | Branchiostoma lanceolatum | exon |
| Blg01034.0-exon-Sc0000003-1570713199:1434875..1435004 | Blg01034.0-exon-Sc0000003-1570713199:1434875..1435004 | Branchiostoma lanceolatum | exon |
| Blg01034.0-exon-Sc0000003-1570713199:1435591..1435670 | Blg01034.0-exon-Sc0000003-1570713199:1435591..1435670 | Branchiostoma lanceolatum | exon |
| Blg01034.0-exon-Sc0000003-1570713199:1436221..1436292 | Blg01034.0-exon-Sc0000003-1570713199:1436221..1436292 | Branchiostoma lanceolatum | exon |
| Blg01034.0-exon-Sc0000003-1570713199:1437067..1437105 | Blg01034.0-exon-Sc0000003-1570713199:1437067..1437105 | Branchiostoma lanceolatum | exon |
| Blg01034.0-exon-Sc0000003-1570713199:1437274..1438488 | Blg01034.0-exon-Sc0000003-1570713199:1437274..1438488 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:1429877..1438488 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01034 |
|
