Blg01097.0 (mRNA) - B. lanceolatum

Overview
NameBlg01097.0
Unique NameBlg01097.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:8163163..8165388+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01097.0 ID=Blg01097.0|Name=Blg01097.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2226bp|location=Sequence derived from alignment at Sc0000003:8163163..8165388+ (Branchiostoma lanceolatum)
ATGCCGGGCAGATGGAACTTGGAGTTCAAGCCCCCCAACCTGTCAAAGTA AGATAGAATCTCTGATTTAGATATCTAAATGGTAAGAGACCATCAAGTGG ATAGAAATAAACAAACATTAGCGTTTCTTAGTTTCAGCTATAGATTCAAG TGGAAGTAAATAAACTGTTAGCAAAAAATTGCAGGCTTATCATCATTGTC TAAAATATATTGATGGAAAAGGCGCTGTGTTGAACTTGCACAATTCTGTG ATCCGCTTGATAGTGTTTTGTTTAGAGAGAAGATTTTACATTCACTCAAT ATGTTGTTGTACAGTATAAAACAGCATGGTGATTGTGTTTTTTATTTGCC TGTAGTTGGACAGTGTCCCGGGCTGACAGCTCCTTCAAATGGTGCCGTGA GCGGCTCCAATACCTACGGATCAATGCTCACCTTCACGTGCAACATTGGA TACAATTTGGTTGGCTCAACTACACTCAGCTGCCAGTCAAACCTGGCCTG GAGTGGAGGTCCACCAACGTGCTCAAGTATGATGTTTAGAAACAAAATTA GGACAGTTACATTTAGGTATAACAACATGACCATAGAATATTTAGAATAT TATATGAATATATTAATAAAATAAAAGAAGGCTTGCAATTAGCTAGAAAT CCAAAATGTACAGTTAGGATTCTGGCAGCGAAATGAAAATATGTTTCTTT TTCTCTGGTTCTTGCAAATGGGGCCATAACGCCATAACAATGGTTTCATC TTACTTTAAAAAAGGTGTATACAAAGGCTAACTTTGCTTGGCCCTAAATG GCTTTAACCATATAACTACTCCTTGCTCTAGTTGTACAGTGCCCACTGCT GTCAGCTCCTGACAACGGTGGAAAGAATGGTGGTAATTCCTACCAAGACG AAGTGACCTTTACATGCAATCTTGGATACGACCTTGTGGGAAGCTCAAGT GTGACCTGTCAAGATGACGCCACATGGAGTGGGAACGCCCCAACCTGTAC AAGTAGGAAATAAAAACTTCTGTCTAAATCTGCAGAGAGAGGTCAACTTC ATATGGTCATAAATAGTCTTAGTTAATTTACGAAAACAAGGTTAACAATA ACATGAAATACTAACTTAGAGTAATCATCCAAAAATGGCAATTAATGAAT TAATATCTCATTTGAAAACGCACCCTAGCGCCTTTACTAGAAAAAGAAGA ACTGCCAAGCAATGACAGTTGGTGAAGATTGTACGGTCTAGCCAAAGGCC CAGTTGTATCTATAAATGGTATTATTTTGTTGACAGTATTGCGCAATGGC TAATGCCATTTCTACTGATTGCCGTCTGATTTTCACATTGGACTGACCAG TGTGTGTATGGAAGTGCTCTTCGAGAGCTGCTTCGAAAAGGACACGCATT ACTTGAAAAAGGACTGTCTTAGAATGACTGCTGATTTGTCAAACTGAGTA CCTGTCATATATGTCAAAAAGAAACCGATATGATTTTCAAGGTTGAGAAT CTCCAGTTAGCTAAATCATCAACAGCTCTTGTTGAACTAAATAAAGCATC GAGTTCAATTTTTTTCTAAATACAGTTGTGCAGTGTTCCATACTGGGCTC CCCTACAAACGGCGCAGTGAGCGGTTCAAACTCCTACGGAGACGTGCTCA CCTTCACATGTGTCCCAGGATACGTTCTGGATGGCGCTTCGTCGCTGACA TGCCGGGCAGACGGAAGTTGGAGTTCAAGTCCACCAATATGCGAAAGTAA GATAGGAACTTTGATTTAGATATCTAAATGAGACCATCAAGTTGATAGAA ATAAGCGAACAGTAGTGTTTCTTAGTTTCAGCTATAGATTTAAGAGGAAG TAAATCAACTGTTAGTAAAAAACTTGAAGGCTTATCATTGTCTAAAGTAT ATTGATGGACAAGGCATCGTGTTGAACGCTGACTTGGACAATTCTGTGAT CTGCTTGCTAGCGTTTTGATGAGAGGACGGATTTTACATTCACTTAAAAT GTTGTATAAAACGGCATTGTGTTACTTTTTATTTGCCCGTAGTTGGACAG TGTGCCGTACTGGGAGCTCCTTCCAACGGTGCAGTGAGCGGCTCCAATAC CTACGGATCAATACTCACCTTCACGTGCAACCTAGGATACAATTTGGTTG GCTCAACTACACTCAGCTGCCAGTCAAACCTAGCCTGGAGTGGAGATCCA CCAACGTGCTCAAGTATGATGTTTAG

Coding sequence (CDS) from alignment at Sc0000003:8163163..8165388+

>Blg01097.0 ID=Blg01097.0|Name=Blg01097.0|organism=Branchiostoma lanceolatum|type=CDS|length=573bp|location=Sequence derived from alignment at Sc0000003:8163163..8165388+ (Branchiostoma lanceolatum)
ATGCCGGGCAGATGGAACTTGGAGTTCAAGCCCCCCAACCTGTCAAATTG
GACAGTGTCCCGGGCTGACAGCTCCTTCAAATGGTGCCGTGAGCGGCTCC
AATACCTACGGATCAATGCTCACCTTCACGTGCAACATTGGATACAATTT
GGTTGGCTCAACTACACTCAGCTGCCAGTCAAACCTGGCCTGGAGTGGAG
GTCCACCAACGTGCTCAATTGTGCAGTGTTCCATACTGGGCTCCCCTACA
AACGGCGCAGTGAGCGGTTCAAACTCCTACGGAGACGTGCTCACCTTCAC
ATGTGTCCCAGGATACGTTCTGGATGGCGCTTCGTCGCTGACATGCCGGG
CAGACGGAAGTTGGAGTTCAAGTCCACCAATATGCGAAATTGGACAGTGT
GCCGTACTGGGAGCTCCTTCCAACGGTGCAGTGAGCGGCTCCAATACCTA
CGGATCAATACTCACCTTCACGTGCAACCTAGGATACAATTTGGTTGGCT
CAACTACACTCAGCTGCCAGTCAAACCTAGCCTGGAGTGGAGATCCACCA
ACGTGCTCAAGTATGATGTTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01097.0Blg01097.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01097.0-exon-Sc0000003-1570713199:8163163..8163209Blg01097.0-exon-Sc0000003-1570713199:8163163..8163209Branchiostoma lanceolatumexon
Blg01097.0-exon-Sc0000003-1570713199:8163518..8163688Blg01097.0-exon-Sc0000003-1570713199:8163518..8163688Branchiostoma lanceolatumexon
Blg01097.0-exon-Sc0000003-1570713199:8164738..8164908Blg01097.0-exon-Sc0000003-1570713199:8164738..8164908Branchiostoma lanceolatumexon
Blg01097.0-exon-Sc0000003-1570713199:8165205..8165388Blg01097.0-exon-Sc0000003-1570713199:8165205..8165388Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:8163163..8165388 +
Properties
Property NameValue
GeneIDBlg01097