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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:2541986..2547737- Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01116.0 ID=Blg01116.0|Name=Blg01116.0|organism=Branchiostoma lanceolatum|type=mRNA|length=5752bp|location=Sequence derived from alignment at Sc0000003:2541986..2547737- (Branchiostoma lanceolatum)
ATGAGTGACGTAGGAACCGAGATGCAGTGCGTCAACTACGTCACCGACTC
CACCAACGTCAGCATCCTCACCGTGGGCGCCAACTCCGTGGTGCATTATG
GGATACCTGAACAACCACCTTCCGGTGAGTCCCCAATATTTCTATTGAGT
TTCTTCATGACGGTATTTTACCAACTCAGATGAATGTCCATGCTAATGCT
ACGGTCACATATCCCATCCGGGACACGATCGGGACATTTTCGAAAAAGAA
AAAAAAGCATATCAAGAAAATACACAATATATGGTAAGAAGTAATTCTTT
TACGTTTTGTGTCTTTTGTTGTCTTCTATATCATATTTTTCGTTCCCACA
AGATGCCCAACGTGGCCCAGCTATGGAAATGGAACCGTATCATTAGATAG
AAATATTGGTTTTAATAAAAAAATGAAAGACAAGTATATTTTCTAGATCT
ATTCTATTTTTCTTATCTTTCAGAGCATGAGGTGCCCACCCCCGTACTGT
GCATCGTGCACAAGCCCGCTGGTCCGATCCTGTCGGCCCGTAGAAGGTCA
CGTGATCCCGACCCTGAGGAGGACTGTCGTCTGTTGGTCGGCGTCAAATA
TGACGTCACCAGTAATGAGTTCATGACCTTGACCTTCAGCGAGAACCTGT
CGAACGGCATTGTGGGAACGGACATCAGTGACCCGGTATGTCTTCAAAAC
TCTATGCATGTTGACACATTGTAAGCGGGAAAACATTTGCAAGTTATATT
GTTTTTTGCATTGAATTAAGAGTGGCTTCACGTATAGACAAAAGGAACAA
ATGATAATATAAGTAATAGGTAATAATCAACTATCACATTGCCATTCACA
TACAACTCGCGACGGCTATGGAATCATTTTTATGGACACTTTGCTAACAT
GTATGTTTATGTAGTATTTCATGAGATAGTGGGCGGGATTGTTATTCCAT
GAATCCTGCGATTTTTGAGAACATACACCTCTGAAAACTTGTATATACCT
TATTGTTCATACCACCAATTTGTACAATACATCCTTTGATTTTTCTACCC
CACAGTCGCGCCAGTATCTCATAGACGTGACCTCTATCAGTCACGTGTCC
AGTGATGACCACTCTGAGAGGCCGTCGCGCTGCCAGTATTGCCCTTTACT
CCCTGACCAGTCGCAGATAACCCTGACCAGAAACATTTGCGGCTTTTGGT
TACGCTTCTTCGGACCAGCTACCATCTTTGACGTGTCCCTCGGCCTTCGA
GTCACCAAACTTCGGAATGACGAAACATTTCCGAAAACGCCCGAAGACAC
GACGACTGATTCCGAGACCATAGAACTCGTTGACGAAGTTACGATTAGCA
TCGAAACTTGCAGCGCTCGCAGGAGACGAAAGAACAACCCGGAAAAGGAA
GTGAGAGACAGAGATGGCGAGGATTTGAAGACGACCAGATGGAAAGATGT
TTGGGTCCATGAATCAAAAGAGAGAACAGACAGCTCATGTGCCCTCGTCC
CAAGAATGATGGGGCGCACAAAACGAACAGGTACACATGTAATAGTTGTA
AATCCCTTTTGGCTAGAGGCTGCAACGAACTATTGACTTAAACCAAAGAC
TTGACAGATCGACCGCTCAAAGATTTGTATCTACGTTTGATGTCTTTTAA
ATCATACTTTTACAACCTACATCAGTTTCCAATTATGAAATCAAGGATGA
AACAAATTCAGTTTTGCCACTGCACGGCCTATGCGCACTTTGTTTAGAAA
TACTACAAAAAATACAGATTGAATAGTGTTTCTAACGTAATAGTAAGATC
TTACCATCTTAATTTTGTCTGGTGATATGTAATGTATTTTCGTGGTTCTG
TCACAGGAAGTCTTAAGACAAAGGCGTATGGCACCATCTTGAGCCGGTTG
GAGACGTTGGGAGAAGAAGGTAAGTGCACCTTCTTCAAGATTCTTTGGTC
GCGTACTGTAAATGACCAAATATGTACGATTACGTATTTGATTCGTAGTG
GCAGCATGGAGTCTTTTTACTACAAATTCTGAAAACAAGAAAACTTTGTT
GACCTTTAGCTTTATACCATCAAGTCTTTGGTATATATATGTATATATAT
GTATATGTACTGGCCGACAGGGCCTTCCAAGAAAAATAAAGGTTTACTTA
CTTACTTTACTTACTATCAAGGCAAAAACTTTGTGATCATGTAAAACTTC
ATCGCCTTTGCTGTTTGTATCACCGAGAGCTCCCACTATACCGGTAATGG
AAATGAGACGATGAAATTTTTTTTCAGGGAATTGGGCAGAATTTGATTAT
TTCTCTGCTCAACTGGTGAAAACCTACGAAAGAAGAGACGTGGACTTGTA
CCTAGTCGTCGTGTTGGAGGTGAGAAGTTGTATTTTTACTTACTTTAATT
TACTTGCATTACCCGTACCAGGGGATGCAAACCAGCTTTGGGACTTTTTG
AAGATCAGGGAACACCTTTTTGAATACGCTTGTAATTTTTGAGTCGACAT
CAAATTTTATCCAGTATATAGTATGTTCCCTGAATTTTATCCAGTATATA
GTATGTTCCCTGGACACTTCCCCTCAAATAGACTATAGTAAAGGTCTACC
TTTTACCTTTATATGTAATATTGTCATCATTACACATTCAATTCATATCA
TTTATATTATCCTTCCCTCCTGCCTTCATTTATTCCTTCATTCCTTCATT
CATCCATTCTCAGCAAGCCTTCGCGGAGTACTACAAGCGGAACCTGGGAG
CGGCCGTGACCATCGCCAAAGGCGCGCTGAAGACGCTGAAGAAGAGACCT
GCTGACAACACCACCATGTTAGCGGGGCGCACCTACTACCTACTGTCCGC
CATCTACCAGGTCGCCAGGAAGTACGGTGTGGCCGAGAGGTGTATGGAGC
ATGCCCAACAGGTGTGGTATACCAACATTATATGTCACGATAGATAGATA
AAATTCTGTTCCTAGCCAATACGGCCCCGATTTCTACTAGATTTAAAAAT
GCCTTTTAACTTGTTATATTTGACCTCTAAATCTATTAATGTAAGCTGAA
TTCGATTGTGGATTATAACTGTATATAGTCCTTATTCCTAATGTTGTCTT
AGTACATAGTAGTGTTCAAATATTTTAATGAATTATCATGTCGTTGATTT
TAATTTACTGTCCAAATTGTAATGCCCGAACGCCAATTCAGCCAATGGGC
TGCAATTGTTCGCGACAGATGTGAATATGAAACAATGAATAATAAACCAT
TACTACTAGACGGGATAACTTTCGATACGGGTCCGTATTTTACTGTATTG
TCTCGGCTTCGAAGTCGTATTGCATGGTCTTGCATGGAATGCTTCTATAT
GGTGTATGAAATTCAATAAATTTCATTTGTTGCATGAATGTATAGAAACA
TGAATATTCAAGAAATATTCTGTTGTTCAGATGGTTTGTTCATCTTGCTC
ATAATGCCTATATGTTAGGAATCAAAAGATTAAACAGATTGCTGTATTTT
GATTCCATGCTTCTCGTACAGAGACTGTTGTACAGTAGATAAGCAGTATT
TTAGAATTGTTGTAAAAAAAAAGGTGCCGCAACTTGTATTTTTTACAGTT
GTTGAGAAATCTCTATCGCTCTAATACCAAGGTGTCTTCACTCTTAATGA
GGAACCCCTCCTCCGCCTCATTCACTGTCGGTCTATTTCTGTCTATATGT
ATATACATGTGTGATAAAACTGTTTTTTTCCCACAGGCTTTGTCAGACTT
TGAGATCGGCGAGGACACAGGTAACGCCTGTTACAACAAAGGCTCGCTGT
ACACCGACATCATAGCGAACGACAGCTGCCCCTCAGACAGGATGTTCGAT
GAGGTAACGGCTACAAATTGCTCTCGGAAAACACCGATGCTTTGTTTGAC
TGTTTGCTTGTTTGTAAGTTTTCTCCTTACAAGTGTGCTACTAATTATAT
TATCTAGAATACAATAGCTCGACTGTTTCTTTGGGTATCGATAGGCCTTC
TACAGAATGTTTTGAAGGTCCTTGAAAGCCTAGAGCTGCCACGGAAATGA
TATATGATCAGTACAGATTCAGATAAGACATTTAAGAAAGACAAAAACAA
CACTTTTTAAACTTATTGTCTTGTTTTGAAGGTCCGTGAAAGCCTAGAGT
TGGCCATCTGTCACTGGCGGAAGGACCCGTCGGGGTGCGTGGCGCATCAG
CGGCGGGCCCACACGAAGCTTGCCTCGGCTCTTCTCGTCTGCGACTCGCA
GCAAGGTCGGGCCCGAAGCGTCAACCCGAGGAATGTCGAAGCCGCCCGAA
AGAGTATCGAGACCGTACGCAAGGAGCTCTGGCAAGGCATGCCGAAACGA
GGGCGCTGCCGCTTTCTCCTGACGGAATCTGATCTGTACTACAGGGAAAA
GGGGTACACCCTCTCACAGGAGAAGGCACAAGAAGCACGACATCTTGCTG
AGGAGTGTGGCTTCAAGCTCGAAAAAGACATGGCGGAGCAACGATTGGTA
AATCTCGCCTGCTGCCAACGTTCGATTCCGACACGTACCACGAGTCAACT
GTTGAACGCCGTCGCACTTGGGGATTCAACTTTGGGGTCTTCAATGGCTA
GCCCACAAGACACTTCATCCGAACAACATTCTTAATAAGTGACCCCTCCA
GCAGAAAAATCGGTCGGCTGACGAGTCTACGAGCCCTAGATTACAGTTTT
AGCTTTGGCAGAACTACGCCTGGTGTTCTCACGATCATAGCGCGAATTTT
AAGGATCGGCCGACGTTCATAGGTTACCGAGCCTCGTCCAAACTATTTTT
TTTTAGCTTTCAAAAAATACGATCGAGTCTCTGGCGAAATGTCGAAATCT
GGTGGCGAACAAATTTGACTATACATGTAGTTTTAAATCATTGTAAATAA
TGCTGGTGACATATGAGCTTAAGTATGTAAATGAATGTCTCGCGTATTTT
AAATCTAAATGAACATATATTTAGCTTTTTGGACATATGCCCTACTTTTG
TGCAAATAAGAAGCTAAAGGCAAGGGAGAATATCATCACTAGTTCCATAT
CCTTCTTTCTTAAGTATTTGCCTGTCACCTAATCTCACGACCACTTAAAG
AAATTAATTATATATAACGCGCTCTGGACATGCCTTATAAAGAGACTGCC
TTAGGAGATCGTCTTGTACATATCTAAGGAAAACAGGGTACTTTTATCTT
GAAAATGCAAATCGTATATTTCAGTGTAGAAGAAAATCTTATTTATGCTA
CATGCATGTTAGGTAACATGTCAAGTTGATGTTAATATTTTCCTACAGAA
ATCAGACATGGAGATGATATTGAATGTATGCTATGTATTTCATTCATCAA
TAAATTAAACATGTGGAAGTCACAGTTGAATCATTGTCTGACATTGAAAT
CAAAGAAAAATGTTAGAACTTAATTTAGGCATTTGTAGATCCATATACAA
TACAATAAATCAGAATCGCCCTGATGAAGGTGAGAGACAGGCCACTGCAA
TGTTGGCAGGTGGTTATATACCAGTTGTGTACAAAGAACTTTTTAACCAG
TAATTTATGAACCTGATGAAACTATTAATCTAGGTGCCATTTACAACCAA
TCAATCAATCAACTAACTAATTAACCAACCAATCCAGAACAATTCTTTGA
TGTGGAGAAAGCTAAGAAGAATTTAACATACACCATCATTATTTTTTAAC
AGAAACATGCATGTGGCTATGGTATCTTCCAGTTACCCTTTTATTACAGT
AA Coding sequence (CDS) from alignment at Sc0000003:2541986..2547737- >Blg01116.0 ID=Blg01116.0|Name=Blg01116.0|organism=Branchiostoma lanceolatum|type=CDS|length=1650bp|location=Sequence derived from alignment at Sc0000003:2541986..2547737- (Branchiostoma lanceolatum)
ATGAGTGACGTAGGAACCGAGATGCAGTGCGTCAACTACGTCACCGACTC
CACCAACGTCAGCATCCTCACCGTGGGCGCCAACTCCGTGGTGCATTATG
GGATACCTGAACAACCACCTTCCGAGCATGAGGTGCCCACCCCCGTACTG
TGCATCGTGCACAAGCCCGCTGGTCCGATCCTGTCGGCCCGTAGAAGGTC
ACGTGATCCCGACCCTGAGGAGGACTGTCGTCTGTTGGTCGGCGTCAAAT
ATGACGTCACCAGTAATGAGTTCATGACCTTGACCTTCAGCGAGAACCTG
TCGAACGGCATTGTGGGAACGGACATCAGTGACCCGTCGCGCCAGTATCT
CATAGACGTGACCTCTATCAGTCACGTGTCCAGTGATGACCACTCTGAGA
GGCCGTCGCGCTGCCAGTATTGCCCTTTACTCCCTGACCAGTCGCAGATA
ACCCTGACCAGAAACATTTGCGGCTTTTGGTTACGCTTCTTCGGACCAGC
TACCATCTTTGACGTGTCCCTCGGCCTTCGAGTCACCAAACTTCGGAATG
ACGAAACATTTCCGAAAACGCCCGAAGACACGACGACTGATTCCGAGACC
ATAGAACTCGTTGACGAAGTTACGATTAGCATCGAAACTTGCAGCGCTCG
CAGGAGACGAAAGAACAACCCGGAAAAGGAAGTGAGAGACAGAGATGGCG
AGGATTTGAAGACGACCAGATGGAAAGATGTTTGGGTCCATGAATCAAAA
GAGAGAACAGACAGCTCATGTGCCCTCGTCCCAAGAATGATGGGGCGCAC
AAAACGAACAGGAAGTCTTAAGACAAAGGCGTATGGCACCATCTTGAGCC
GGTTGGAGACGTTGGGAGAAGAAGGGAATTGGGCAGAATTTGATTATTTC
TCTGCTCAACTGGTGAAAACCTACGAAAGAAGAGACGTGGACTTGTACCT
AGTCGTCGTGTTGGAGCAAGCCTTCGCGGAGTACTACAAGCGGAACCTGG
GAGCGGCCGTGACCATCGCCAAAGGCGCGCTGAAGACGCTGAAGAAGAGA
CCTGCTGACAACACCACCATGTTAGCGGGGCGCACCTACTACCTACTGTC
CGCCATCTACCAGGTCGCCAGGAAGTACGGTGTGGCCGAGAGGTGTATGG
AGCATGCCCAACAGGCTTTGTCAGACTTTGAGATCGGCGAGGACACAGGT
AACGCCTGTTACAACAAAGGCTCGCTGTACACCGACATCATAGCGAACGA
CAGCTGCCCCTCAGACAGGATGTTCGATGAGGTCCGTGAAAGCCTAGAGT
TGGCCATCTGTCACTGGCGGAAGGACCCGTCGGGGTGCGTGGCGCATCAG
CGGCGGGCCCACACGAAGCTTGCCTCGGCTCTTCTCGTCTGCGACTCGCA
GCAAGGTCGGGCCCGAAGCGTCAACCCGAGGAATGTCGAAGCCGCCCGAA
AGAGTATCGAGACCGTACGCAAGGAGCTCTGGCAAGGCATGCCGAAACGA
GGGCGCTGCCGCTTTCTCCTGACGGAATCTGATCTGTACTACAGGGAAAA
GGGGTACACCCTCTCACAGGAGAAGGCACAAGAAGCACGACATCTTGCTG
AGGAGTGTGGCTTCAAGCTCGAAAAAGACATGGCGGAGCAACGATTGTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01116.0-exon-Sc0000003-1570713199:2547614..2547737 | Blg01116.0-exon-Sc0000003-1570713199:2547614..2547737 | Branchiostoma lanceolatum | exon |
| Blg01116.0-exon-Sc0000003-1570713199:2547053..2547264 | Blg01116.0-exon-Sc0000003-1570713199:2547053..2547264 | Branchiostoma lanceolatum | exon |
| Blg01116.0-exon-Sc0000003-1570713199:2546208..2546682 | Blg01116.0-exon-Sc0000003-1570713199:2546208..2546682 | Branchiostoma lanceolatum | exon |
| Blg01116.0-exon-Sc0000003-1570713199:2545819..2545881 | Blg01116.0-exon-Sc0000003-1570713199:2545819..2545881 | Branchiostoma lanceolatum | exon |
| Blg01116.0-exon-Sc0000003-1570713199:2545369..2545460 | Blg01116.0-exon-Sc0000003-1570713199:2545369..2545460 | Branchiostoma lanceolatum | exon |
| Blg01116.0-exon-Sc0000003-1570713199:2544827..2545024 | Blg01116.0-exon-Sc0000003-1570713199:2544827..2545024 | Branchiostoma lanceolatum | exon |
| Blg01116.0-exon-Sc0000003-1570713199:2543885..2544001 | Blg01116.0-exon-Sc0000003-1570713199:2543885..2544001 | Branchiostoma lanceolatum | exon |
| Blg01116.0-exon-Sc0000003-1570713199:2543241..2543606 | Blg01116.0-exon-Sc0000003-1570713199:2543241..2543606 | Branchiostoma lanceolatum | exon |
| Blg01116.0-exon-Sc0000003-1570713199:2541986..2541988 | Blg01116.0-exon-Sc0000003-1570713199:2541986..2541988 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:2541986..2547737 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01116 |
|
