Blg01119.0 (mRNA) - B. lanceolatum

Overview
NameBlg01119.0
Unique NameBlg01119.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:6248319..6251488+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01119.0 ID=Blg01119.0|Name=Blg01119.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3170bp|location=Sequence derived from alignment at Sc0000003:6248319..6251488+ (Branchiostoma lanceolatum)
CTGCTGTGTGCTCTGTTTGGTGGAGAGCCGTAATGTTCCTGAAAAGGTAT GCGGGGACATAGTTACATACAATGTGCTTACTGGGTTACGCTACTAACTG ATGTGAAATGTCGTTTTGATAGCTTCATGTAAAGTTGTCGACAACATGGG AAGAGACAAGCTTTAAAAAATTTAAACCACAGCAACAAGCTTAATTTGTG TTGAAAGGAAAGGTTTCAATACTAGTACTATTTGGTATTTTTGTTGGTGG TTTGTAGATAATCTATGTGTGATTATATGTGTACATATGAGCGTTTTGCT ACTCGTACATGTTTCCGTCAAGATATTTGAGACAATTCGTCCATTTCTAT CGATCCCCTCCGATCTTTTCTGGTATTTCCTTCATGCCACATGGATCGTA TCCCCTGTACAGACATCGCATGCCATGTTAGAAGGTCATCAAATTGTGAT TCAGCCCAGACAAGTTTGTAAGAAGTTTACAGGAAGGAAACCACAGCGGA ATCACGGCGGCCATATTGACCACACAATGTCAAAGATCAATGATCTCAAA CGTGAAGGATTGTTGATTAGATCGTTTAGGGTATACTTGGCAACTTTCCA TATAAGTTGATCACTAGCGTTGCCAATTTAGTAAAGCTCTGTCATATTCT ATCTTATGTCTAGGAACAGGAAAATGGTAAGGAGTAGACCAGATTAGATG ATCTTAGATGTCTGAGGCAGAAAGAAAGCTAGGAAAACAAATTCACCGTG AGGGAGGTACACAGAATAATTGACATATTGAACATCAGTGCATGCATTTC GATAGCCACAACACGACTTATCCATAATATTACTTGAGATGTTCTTTACC ATCCATGTTATCATACGATCTTATCATAAGATAGATGGTAAAGAATATTT AAAGAAGAATTATGGATAATGATCGTGTTGTGTCGATCACACTGCATGCA CTGGTGTCCGTTCCCTCCATAGAAGGAATTTTTAGACAAATCAGAAATTA CAGTATGGAAGCAATAAATTATAGAGCTACTCTTCAAGCAGAGGTTCGGT TCCAGCTGGTTTTTGACCTGTCTTTAGGCATTTTTTCGGGATATCTACTT TGTCCTGTTTTCTAGAAGTCGCCAAGTTTGGAAAACAGGAGAAGTCCTGT CGAAATCCCGACAAAAATGCCCCAAAACACGCTAAAAATCAGCCGACGGA GTCGAACCTCTGCTTGAAGAGTACATGTATATATATTATATATAGAGCCG TGATGGTTAGGGGTGGGTACCGGTACCGTGTACCGGTACAAAACCGGTAT TTCTTAATGGACCGGTCCAAAAAAACCGGTCCGTAAAAAATCAGTGGACC GGCCTATGGACCGATTAGAAAATTCATAGTACCAGGCTACAAGTAGGCGG CCACATAACTGGTCTAAGAAAATACAAAACAGCAGATTTAACGAATCGAA GACGTTAGCTGTGAATCATATCTAGAAACACTGAAAGGATGAGTAAACAG ACGGCGTGGAGAGCATAGTTATAATTTTGAGACAAAGTGCAAACCTAAGA AATTATATCGTTCCAGACATGACGTTTATTTGGAGACTTTTACGTGTGTC TCGCTCTCCAAAATATGATGTACTGCGACACTTCTATAATCAGGTACAGG TACAGGTCCGGACCTGGACCTGACCCTCTGGACCTGGACCTGGACCGGAC CTGAATTTTATGTACCGGTACCCACCCCTAGTGATGGTATAGCCTGAGTA CCAGCCACGGTTAGCAAGCGTTTTTGAGCCAGCGCTCACTACGGAGGCTG GTACTCAGGCTACTGATTGTATGATTTCCAGGTAAAAGACGACCTTGACC TTAGTCTCGGTCCGCAGCCCCGCAGTGTGAGGAGCACGGACCGCAGGTGC CCCAGTATCCGGTCACGACTCGTGGCCTACGACAGCGTCACACGGAACCT ACGAGCCGAGGCTAAGGCCGAGAAAGAGTACCTCCAGATCCTGGAGAAGG AAAGGGGCATTCTCAACAAGCAGTTCAGGGACTGTGCCAGGTGCAGCTAA TTCTATTGCAAGGGACATTATGCCTATGTAAATTAATGTGCTAGAATACA TTCTTGGTAAATGCAAATTTTCACAGTATTGGATTGACAGTTACATTCAT CTTACAGGGTCTTCCACAAACTAGAAATTAAGCTTCATACTGACTTCATA ATCATATGGCTTTTTCTTGACTGTAAAAGTTAACATGTGGTTTGAATCTC TCCGTTTCAACTAGATATTTTGACTACATCGTCCCGGACTACAGCTGCGG GTCGCTGCGACAGCTGATCCTGAAGTACGACACCCGGATAGGTTTCTCGG AGCGCCGCCTGTTCCAGCACCACCAGGACTTGGACTGGCTGGACGGGCAG AGGGACATGACCCGGAAGCAGTACGAGGCGTGCACATACCGCAGGTCACG TGATTTCCCATCGTTCCTTTCTCCCATGAGCTCCAATGGTCACGTGATCT CCCATGACCAGGGAACAGTACGAAGCATGCACATACCGCAGGTCACGTCA TTTCCCATATTTCTTTTGCACCCGTGAGCCCCAATGGTCACGTGATCTCC CATCTTTCCTTTCTCCCATGAGCCCCAATGGTCACGTGATCTCCAATCTT TCCTTTCTCCCATGAGCTTCAATGGTCACGTGATCTCCCATCACCCTTTC TCCTATGAGCAGCCTCGGCTCTTACTTTTCGCTTTGTTGACGATAATCAC AACCACTTGCTGCTAAATTCATTTTCATTTCGACACACAAAATAGACATA GACGCAACACCGCATCCTGTAGAAAAAACGCATGCAACAGGTTTGCATGG AAGCCTGCCCACTAGAGTACAATAGTCTCTTGGCTCATTACAAAATCTCA CAACAAAATAGAATGCTGGGCATCGCTTTGATAATGATAACTGAAACGTA TGTTTTCTTTTTCTAGAAGTTGACCTAGAAGTCTTATTGTTTTAACTTGC TACTTTCTTGCCGTCCCAGCACGTATAGATAGAAGCGTACATGTTGGTAG CACATGAAGCAGATTTGAGATGCTTTTTTGTCTTCACAGATGGGCAGACT CACGTGCACGCAGAGGGTGACGGTCTCCAACACAACATACGGGGCTTTCC TTTGTAGGTGAAGCCGTGTC

Coding sequence (CDS) from alignment at Sc0000003:6248319..6251488+

>Blg01119.0 ID=Blg01119.0|Name=Blg01119.0|organism=Branchiostoma lanceolatum|type=CDS|length=411bp|location=Sequence derived from alignment at Sc0000003:6248319..6251488+ (Branchiostoma lanceolatum)
ATGTTCCTGAAAAGTCTCGGTCCGCAGCCCCGCAGTGTGAGGAGCACGGA
CCGCAGGTGCCCCAGTATCCGGTCACGACTCGTGGCCTACGACAGCGTCA
CACGGAACCTACGAGCCGAGGCTAAGGCCGAGAAAGAGTACCTCCAGATC
CTGGAGAAGGAAAGGGGCATTCTCAACAAGCAGTTCAGGGACTGTGCCAG
ATATTTTGACTACATCGTCCCGGACTACAGCTGCGGGTCGCTGCGACAGC
TGATCCTGAAGTACGACACCCGGATAGGTTTCTCGGAGCGCCGCCTGTTC
CAGCACCACCAGGACTTGGACTGGCTGGACGGGCAGAGGGACATGACCCG
GAAGCAGTACGAGGCGTGCACATACCGCAGATGGGCAGACTCACGTGCAC
GCAGAGGGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01119.0Blg01119.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01119.0-exon-Sc0000003-1570713199:6248319..6248364Blg01119.0-exon-Sc0000003-1570713199:6248319..6248364Branchiostoma lanceolatumexon
Blg01119.0-exon-Sc0000003-1570713199:6250173..6250358Blg01119.0-exon-Sc0000003-1570713199:6250173..6250358Branchiostoma lanceolatumexon
Blg01119.0-exon-Sc0000003-1570713199:6250583..6250762Blg01119.0-exon-Sc0000003-1570713199:6250583..6250762Branchiostoma lanceolatumexon
Blg01119.0-exon-Sc0000003-1570713199:6251408..6251488Blg01119.0-exon-Sc0000003-1570713199:6251408..6251488Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:6248319..6251488 +
Properties
Property NameValue
GeneIDBlg01119