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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000896:4346..10919- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01190.1 ID=Blg01190.1|Name=Blg01190.1|organism=Branchiostoma lanceolatum|type=mRNA|length=6574bp|location=Sequence derived from alignment at Sc0000896:4346..10919- (Branchiostoma lanceolatum)
AGAAGCCCCCGCACCGCTCCACGTCGCCGAACGCGCTCCTCGTGTCCTTC
AGCGTGTGCCGCAGTTGTCGGGAATATTTACAAAACTTCGACAACTCGTA
AGCTAAAGGACTTCCCGCCATCTTGGCTCACAGTCTGGAGTAAAGCTAGC
AGCACCTTCGACCATAGCCTATTCGCTGTGTCGTCTGCAGTAACGTCAAC
ACCCGATTCGGCGCTTGTGTACTCGCCGAATCGTTGTAAGTAACAAAAGC
AGCTAGTTCGGTCATAGTCTATTCGCAGCTGCAGTTCCGTTGACCTACAC
TGGACGATATTTACAAACACTTCAGTAGTGTACCCTCTCAACATCGATGG
TATCACTCACTTTGTGGTCCTGTGTAAATCCCCAAATACAATATATTGAC
CTCTGATATCATAACATCGGTGTGAGACAGCACATGCATGTTACGAATCG
TCCGCCACCGACTTGCCTGCTAGTTCCTGGTCCAGAAAAAGCTGTACACG
CGAGATGCGCTACTAAGACGGACTTGTGTGTGTGCAGCTAGATAGCGGCC
ATGTCTTCACCTTACAAGGACGAGACGCCAGGATCGCTGCCGGGCATAGG
ACAGGTCAGTCTTGTTGTTAGCTCCCCCCCCCCCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNCCCCCAAATAACCCCTTCAGGGGCATAGTAGGGGGGGAGTTG
AGGTCCCGGGCTAAGGCGGGCAGGCCTCCAGCCTGGCACGGAACGACTCA
ACGGTGGGAGCCGTCGCAACCATGCCAGGCAGGGTGTTCCACTGAGGGAT
GGTACGGGGAAAGAAAGAGTGTTTATATGTGTCGGTTCTAGCGTGGATGG
TGTGAAACTTGAGGTCGTGGCTCCCCCGGGTGCGCCCCTGGGCTGGTTTC
AGCAAACTGTAAGTGTCTATATTAATGTGGTTATTAACAAGTTTGTAGAA
GAAGGTGAGGCGGGCGTTCCTCCTCCTTTCAGAGAGAAGGGGCCACTGCA
GGTTGTTGAGCATTTGTGTCACGCTGCTAGTCCGCAGGTAGTCATTAAGG
GTCACGCGGGCGGCCCTGCGCTGGACGGCCTCCACCGCCTGTATCCCTTT
GGTGGTGTACGGGTCCCAGACGATGGCACTATATTCCAAGTGAGGCCGCA
CCAGCGCTTTGTAGCAAGTGGCCTTGACCCTAGATGGACAATGGGTCAAA
TTGCGCCAAATGTCCCCCAGAACACGACCGGCTTTGCTAGTGGCGTGGTT
GATATGGGTGTCCCACCGCAAATCGTCGGACAGTTGTACTCCAAGATAGG
GGTGGGACTTAACACCGGTAAGGGCTTCTCCACAGAGGGAGTACTGGGTT
AGGGTGGGATGCTTCTTACGGGTGATATGAAGGATGTGACATTTAGAGGG
GTTGAACGACATGAGCCAACGATTTTGCCATTCTGATAACGCATCGAGAT
CGGACTGTAGAGCTTGAGCGTCAGAGGGCTTGCTGATGGTTCGATAAATC
AAGCAATCGTCGGCAAATAATCGAACGTGTGAATCTACAGAGTTGGGGAG
GTCATTAATGTACAGTAGGAAGAGTAGAGGGCCTAACATTGTACCCTGCG
GAACCCCAGAGGTGACCCTGACAGCTTTAGATGTTCCGCCGTCAAAGACA
ACCTGGGTTCTCTCCGTTAGGAAGGCCCTAAGCCAAGACTCATCCATAAT
TTGCTGCATCCTTGCACATGGTCAAGCCAAGTATAGTCAACACAAGTATC
CAATAGACTGATCCCAAAGCCATGCCCCCTGTTCGATTTTGAACACCTCC
GTCACAAAAACAGGGTTTGACAGACCAAACATGGCTTGAAAATAATGCCA
CTGACTTCGGTTTAGCTTTTGTGGCCCTGAAACCCTTTCAGAGCGGGCCA
AATAAGAATGCTATGTCTTCTTTGTTGAAGGCTGCATCCACCGGGTAGAG
TTGTTTAAGGAGGGAGTAGGTGTAGTTGCGGTGAGAGCATAATGTTTTCG
GTCAATGTTACTACTAGTAGTAATGCCGTATGCGCCGCATAGCTTTCCCT
TGTCGGTGGGCATCAGCGCCCAGTTTCAGACAAGCAGGCGATGCAGGTGT
AAAACAGGGTTCATATATCTGTGGCAGCTAGGGTTCCCACTGTATTGACT
GCATGCATACCAGCTGCATGGTATTTAGTAACTACAGTAAGAATTAAAAT
GTATCCTTTTACTTCCCTGTTCACTTTCAAGTTAACCAGTTTCACACACC
AATAACTGAAGATACAAAACTCTGCGCTAGCAGACTTTGTAGTAGTCAGC
ATGTGGTACGTATACAAGCTTCCTCTCCTTGAGTGCCCGATCTATTTTCT
TTTTGAATTCGTTTTTGTTCTGAGCATGAATTCAACCAATACAGTGGAAA
ACCTGTCCCAGATATACGTACCCTGCTTTACACGTGCCATTTCTGCCCCG
CCAACGCTGTTTTTGACGGAGGTGGGCTGAATAGAACAGGGGGTTCTATG
GGTCTTCTATTCGTTCCATATGGTGTTCGACAGGATCGGTCTATTGTGTC
ATTCAGGTTCAGAGGAGGCCGATTCTGAACCTTGACCTTTATCTCCCAGC
AGGCTGTGGGTCATGGGCTCTCCAGACGGCAGAAGTTCAGGCGGAAACAT
GTCGGTCCACCTGTCCCCTCACCTGCAGCTGCAACACCTGGCACAGGTGC
AACACCTGGTGTGACCATGGCACCGAGAGGTTTGTATCCTACACATACTT
CATAAGAACATGTTCAGTACAGGTTTGTTTGCACAGGTTTGACTGTGATA
ACTGATCGATCAATCATTCGCGAGCATCAGGAACTGATGGGATACTTTAT
TTGCACATTAAAGTACCTTTATTTGCACATAACACATTATTTGCACAGGA
CTGACTGTGATGCAGTTTATGGAGGCCCGAGCCGTGGAGCTGAATNCCAG
GGCTCGATCTTAACTATGTCCCGATGTCCCGGGGCCACTAAAATTTAGGC
CGGGACAACTGAAAAATCTATTTGGGACACTTTTGGGACAATAGGAAAAT
AATCAACTAATCAACATCAGAATGTCCGATCTCCCCGCGGTAGACCGGAT
CCGGACCGCAAGCGACCAAAACACGTCNCGACCAAAACGTAATCTAAGAC
GACCACGTCATTTTCAAATGTGTGGCGACGTCAGTTTTTAATGGTAAGTT
GCGGGAAATCACAGTAAATCGGCTCGTGTGCCGCTGGCAGCATCGCGCGA
AAACGTAAACAATAGCCGAGTAGGTCTCCATGTGCAGAATCTGCGGGGCG
GTTCCCGACTATCAGAACAGCCGTAAATGTATCAGATTCCCGGGGAATCT
CCTTATTTGGAAGTTAACAGTCCGCGGTTGACCAACACAGAAGCTGTTCT
TTGTAAAAGATTCCTTTCTCTGTCAGCGCGGGGATAGAATTAATTCTTAA
CGGTATTTCTGACAAATTTCTAGAGCAAGGTTACGTCATTTTCCCATCCA
TAACAGCGAATTAATGCACAGAAAATTCATTTTTACAAAGAGAGGAAGAT
AAAGTTTCAACTTATTTAGAAGCTTCGCCATGATTGGACGATTCGGCTAC
TGCAAATTTGTGGCACCGCCCACAAACCGCCGACTTTCCTTTTAGCAGAC
TTTCTGCCGCCGACGTCGCCATGGTCGCGACTGTCATCAAAGGCTGCCGA
CTGTCAATCAGCGGCAACTTTGTGGGAAAACGCGCGAGTTGGATCTCCGT
GTGCCAGTCAACAGCGAACCTCTGACGATTTTACGTTCCCTGAACTTTCC
CACAGCGATGCTTGTACAAAGTTTTTATTAGACGGAAGTTCCACGTTATC
TGTAAGACGCAGAACAGCGGTTTCGGCTTCCTGGAACGGGCCGGCGGCGT
ATGTACTTGGGGGAGAGGGGTGACGCGATTTCTAATAGACGGGCCAAGGG
CCGCGGCAAGGGACTTTCGTATTAGGATTTTCGCCGCCGACCGCCGAGGG
AAGATCACCTTGGCGGCGATTTTTCTGGAAACATGCCGGCGTCGAAGCGT
ACTATACCAGGAATATCGCTTCCAATTTCGCACCGAAGAAAACTTCTGAC
AGCGACGATTGTTGCGCTTCGACTTAGGACAGCCGGACACAGCCAAAAAA
AGGAAAACTGGTATCGACTATTGATATTGTTGAGTAGCTAAATAAACTAT
TGATATTGTTGTTTCTGAGTTTCAAGTTGTCTTTCACCAGAAGTATTGTA
TGTCAAGGTCCTGTGGAGAAGTTGATTGACTGCCACGATTGTCATAAATA
TGACCCTCAAAACTGAAAAAAAGCCTTCTCAATACCCTAAAATGCAAGAG
TTTCCGGGGGGCTTCGCCCCCCTGGGTCCCCCCAACGGGGCTCTGCCCCT
GGACCCCGTCGGGGTCTTAAGGCAGCCCCCGAACCCCTGCCCCGATGCTG
TGAAAAAAACCTGGCGAGAACACTGTTCATTCTTTTCTTCCCACCTGCCA
CTGATAAAGTACAAGTGGTCCCTGTAAATGTACTAGACTAGTGTCACTCA
GTGACTCACTATGTACTGTTTATTTTCAGAAAAAGATTATGTTCTTAAAA
TGACTTTTTGAAGTTCCCAGTTCCCACTTGCCACTTGTTACATGATAAGA
CACTGCAGCAAGTGGTCTACCTGTAAATGTGCAGTGGACGTTGCACTACT
ATCCATAAGATATAATGTAATAAATCTGTTGTTGTCTAATAAAAAAAAAC
AAGATAAGTTTGAATCTGAGTTGATTATTTCAATGGACAATAATCTTACA
CAGCAATACTGAACTCTTACTGAGCTTTACAGTTGTTGTAATACATAATT
TCTGAAAATAGGGTTGGGACAGTCCATCCTCACTTCGGGACAGTTGAAAT
TTATTTTTGGGACAATGCTGGGACAGTAGGGAAAAAAGTTAATTTTGAGG
CCTGACTTTATTTGCACATTAAAGTACCTTTATTTGCACATAACACGTTA
TTTGCACAGGACTGACTGTGATGCAGTTTATGGAGGCCCGAGCCGTGGAG
CTGAATAGTCTGCTACATTCGGCGCAGCAGACGCACGGCCCGCGGCACAC
TCTGCAGTCGCTGCCCCGACACATGCGCCGGCGAGCCGTCAGCCACAACC
CCAAACGGCTGCCGCGCAGGCTGCGGGAGGTCGGCACCAGAAAGGTGTGT
AGTCACTGTTGAACCCTAACCTTTAACCTTCACCCCGAACCTGTTACCTA
TACCCCTCAGCCACAACCCCAAACGGCTGCCGCGCAGGCTACGGGAGGTC
GGCACCAGAAAGGTGTGTAGTCACTGTTGAACCCTAACCTGTAACCTTCA
CCCCTAACCTGTAACCTATACCCCTCACATGCGCCGGCCAGACGGCTGCC
AAACAGGCTACTACAGGAGGTCATCAGAAAGGTGTGTAGTCACTGTTGAA
CCCTAACCTTTAACCTTCACCCCTCAACCTGTAACCTATACCCCTCAGCC
ATTACTCCTAACGCCTGCCGTGCAGTCTGTGGGAGGTCGGCACTAAAAAG
GTGTGTAGTCATTGTTAACCCCTAACCTTTAACCTATACCGCTCAGTCAC
AACCCCAAATGACCTCCTCACAGACCCTGGAGGTCAGCACCAGTGCCGCA
TCTCTCAGCCTCAGTTTACTTTAGACGCTGCTGTGTTGAGCCGCTTCCTA
TGTGTCTTTGTGTTGGCGAGTTTGTTAATTCATGCATTGGTTCGGCTGTG
TTAGATATACAGCCAGCGCTGGAGATATGTTTGTTTGTAATGAGTTGTTT
GTTTCTTTGTTGTTGTTTGCAGATGTTGCAGAACCTGCAGCCTGGCCAGC
AGCTGGAGAAGTCGCGCCGACCCAGGAAGTTTTACCGGCGGCGGGCGGCA
AACCGACAGGAGAGCTTCAACCAGCGGCAGAACCATGTCAGCTGGCTGCA
CACACACGTCTGGCACGCCAAGCGCTTCCACATGGTCAACAGGTGCGTTA
CCTGCACACACACGTCTGGCACGCCAAGCGCTTCCACATGGTCAACAGGT
GCGTTACCTGCACACACACGTCTGGCACGCCAAGCGCTTCCACATGGTCA
ACAGGTGCGTTACCTGCACACACACGTCTGGCACGCCAAGCGCTTCCACA
TGGTCAACAGGTGCGTTACCTGCACACACACGTCTGGCACGCCAAGCGCT
TCCACATGGTCAACAGGTGCGTTACCTGCACACACACGTCTGGCACGCCA
AGCGCTTCCACATGGTCAACAGGTGCGTTACCTGCACACACACGTCTGGC
ACGCCAAGCGCTTCCACATGGTCAACAGGTGCGTTACCTGCACACACACG
TCTGGCACGCCAAGCGCTTCCACATGGTCAACAGGTGCGTTACCTGCACA
CACACGTCTGGCACGCCAAGCGCT Coding sequence (CDS) from alignment at Sc0000896:4346..10919- >Blg01190.1 ID=Blg01190.1|Name=Blg01190.1|organism=Branchiostoma lanceolatum|type=CDS|length=971bp|location=Sequence derived from alignment at Sc0000896:4346..10919- (Branchiostoma lanceolatum)
ATGTCTTCACCTTACAAGGACGAGACGCCAGGATCGCTGCCGGGCATAGG
ACAGCAGGCTGTGGGTCATGGGCTCTCCAGACGGCAGAAGTTCAGGCGGA
AACATGTCGGTCCACCTGTCCCCTCACCTGCAGCTGCAACACCTGGCACA
GGTGCAACACCTGGTGTGACCATGGCACCGAGAGGACTGACTGTGATGCA
GTTTATGGAGGCCCGAGCCGTGGAGCTGAATAGTCTGCTACATTCGGCGC
AGCAGACGCACGGCCCGCGGCACACTCTGCAGTCGCTGCCCCGACACATG
CGCCGGCGAGCCGTCAGCCACAACCCCAAACGGCTGCCGCGCAGGCTACG
GGAGGTCGGCACCAGAAAGATGTTGCAGAACCTGCAGCCTGGCCAGCAGC
TGGAGAAGTCGCGCCGACCCAGGAAGTTTTACCGGCGGCGGGCGGCAAAC
CGACAGGAGAGCTTCAACCAGCGGCAGAACCATGTCAGCTGGCTGCACAC
ACACGTCTGGCACGCCAAGCGCTTCCACATGGTCAACAGGTGCGTTACCT
GCACACACACGTCTGGCACGCCAAGCGCTTCCACATGGTCAACAGGTGCG
TTACCTGCACACACACGTCTGGCACGCCAAGCGCTTCCACATGGTCAACA
GGTGCGTTACCTGCACACACACGTCTGGCACGCCAAGCGCTTCCACATGG
TCAACAGGTGCGTTACCTGCACACACACGTCTGGCACGCCAAGCGCTTCC
ACATGGTCAACAGGTGCGTTACCTGCACACACACGTCTGGCACGCCAAGC
GCTTCCACATGGTCAACAGGTGCGTTACCTGCACACACACGTCTGGCACG
CCAAGCGCTTCCACATGGTCAACAGGTGCGTTACCTGCACACACACGTCT
GGCACGCCAAGCGCTTCCACATGGTCAACAGGTGCGTTACCTGCACACAC
ACGTCTGGCACGCCAAGCGCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01190.1-exon-Sc0000896-1570713199:10316..10919 | Blg01190.1-exon-Sc0000896-1570713199:10316..10919 | Branchiostoma lanceolatum | exon |
| Blg01190.1-exon-Sc0000896-1570713199:8041..8170 | Blg01190.1-exon-Sc0000896-1570713199:8041..8170 | Branchiostoma lanceolatum | exon |
| Blg01190.1-exon-Sc0000896-1570713199:7846..7871 | Blg01190.1-exon-Sc0000896-1570713199:7846..7871 | Branchiostoma lanceolatum | exon |
| Blg01190.1-exon-Sc0000896-1570713199:5601..5734 | Blg01190.1-exon-Sc0000896-1570713199:5601..5734 | Branchiostoma lanceolatum | exon |
| Blg01190.1-exon-Sc0000896-1570713199:5458..5482 | Blg01190.1-exon-Sc0000896-1570713199:5458..5482 | Branchiostoma lanceolatum | exon |
| Blg01190.1-exon-Sc0000896-1570713199:4346..4947 | Blg01190.1-exon-Sc0000896-1570713199:4346..4947 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000896 | genome | Sc0000896:4346..10919 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01190 |
|
