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Sequence
The following sequences are available for this feature:
mRNA from alignment at xpSc0039787:9786..16584+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01197.2 ID=Blg01197.2|Name=Blg01197.2|organism=Branchiostoma lanceolatum|type=mRNA|length=6799bp|location=Sequence derived from alignment at xpSc0039787:9786..16584+ (Branchiostoma lanceolatum)
GTACGTTTAGAGTAAATAACAGACAATTTCGTTATTATTTCGTATATGCG
CCTGTTGCACAGATACATATGATGCATGTTAAGTCATATTTTACTTGTTT
TAAACGTTTGACGTTCATTTTGTTGCATCAGACTATCAGCGTGATGCTGA
CCGCCCACTTCGGTCACAAGGGGTACCATTTCCGAAAGGCGGAACTCAGA
CCCGCCTTCTGGCCCGAACAGCTACAGTGGAAGCCCCCGTATCTAATGCC
TGAGTGGTATAAAGGTATGTGTTATTTTTGTAAAGAAGAAGAAGAAATGT
TCAACCATCAATTTCTTGAAAGACTCATTCGTATTTATAATACTAGTATG
TATTTCAGTTCCTGACGGCGACACCTGTCTTAGTTGGCTATCTCGCAATC
GTTATGTTAAAAATGATCAATGACATGTAAACAACGATGAGAACTGGGCT
ATTCTCACCACAGTAGTCTGACGTCTCAAATGAAGCCGCACAAATGAAGC
CGTGAGCTCGAAATATACGTCATACTCAGAGTGTCGTTTTATAAGGCGTA
CGAAATGATTCAAGAGGAAATGATTTAAGATCTATTTCAAATTGTGGATT
TATACCAGCTCTTTATAGGTATGAATTTGCCGAGCGTAATAGTTTTGATA
CGCGAACATTGCTAGTCCGTACATAAGTTATTTGTAGGAAGACGATCGTA
GCGGTAATCATGTTCTTTTTAATTCTCAGAAAACACCACTCCCAAAGATA
GAAACTGGACAAGGGACGGGCTGGTGCCCATCATAGAGGCGGGTTACCGC
TACTATGGGTACGACCCGAATGTCCACATCGAGGCCGCCCAGACAAGCGA
CACCCCCAGCACAGCCACGGGCGCCGACCCTGACACCATGGAGGAGGGGC
TCTCGCGGCCGGCTGCCCCAACCGACCGGAACAGCGACACCCCCAGCACA
GCCACGGGCGCCGACCCTGACACCATGGAGGAGGGGCTCTCGCGGCCGGC
TGCCCCAACCGACCGGAACAGCGACACCCCCAGCACAGCCACGGGCGCCG
ACCCTGACACCATGGAGGAGGGGCTCTCGCGGCCGGCTGCCCCAACCGAC
CGGAACAGCGACACCCCCAGCACAGCCACGGGCGCCGACCCTGACACCAT
GGAGGAGGGGCTCTCGCGGCCGGCTGCCCCAACCGACCGGAACAGCGACA
CCCCCAGCACAGCCACGGGCGCCGACCCTGACACCATGGAGGAGGGGCTC
TCGCGGCCAATTGCCCCAACCGACCGGAACAGTCTCAGCCCGAGCCCCAG
CCCGAGCCCGATTCGAGGCCCCAGCGCGAGCCGAAGACCGAGCCCGAGGA
CATCCACTCCCACGAGCCCCGGAATGCAACCTCCCTTGGGCTCCATCATT
TCTGAAGATGGGAGCCTGGGGGGTTGGGTGCCAAGCACAGCTGTTGTCGC
CAAGCGGATGGCCTTCACCCCTTGCCCAGAGGCAGAGGACACAACGCCAC
CAACAAAAAGGCGACAGCTACCATACCAGGAGCCTAACGAGTGAGTCCAT
TTTTCTGTCATGCCTGTGTTGTGATATACTTAATATGCAAAATTCTCGCC
ACTTTTCAATTATCCAAAAGAAGCCGAACCCAATCTTTATCTGTCCGTCC
ACTCTGTGTTACATATACATATACATTTACATGTACTTGCAATTCAGCTC
TGCAATTAGTCTACGGGCAGTAATTTGCAATAAACTTTCATTATGTGCTC
GACAAAACCGTACCAAACTTACAACTTACAGGTACTTTATAATCAAAAGG
CTCCACACCTACATTGCTCATGGGAATAACAACATTTTCAAATATCATTC
TCGGTCATTTTCCCCTTAAACGTGTTGTGTTTAATTAGACAGAACTGTAA
GCATTTCCCTTTTCTTCTCAGGACTGTGTTGTGGGATGGCGCTGCCACCA
AGACAAGCGTGAGGACACCCGAATACAAGCCGGTCTCTAGTATCGCAGCA
AGGAAGAAGGAGAAGAAAAGTCGTTCCAAAAGGACACGGGCCGGTAGGAT
CGTTAAAAAAAAGAAAAACTACACCCCTTCCATTGCATGAATCACTTCCC
GTCCCTTCCAAAAAAATTTTTTTGTTTGTGTTTAAATACTTAGCATTTAT
TGCCCGTGTGTATTTTTTGGTAAAGTTAGGCACTTAGGCAAACAGGTATA
CTGGTATATTTTTAGTGTAATGTATTTCGGTGTAAAGTATTTTAGTGTAA
AGTATCTCAGTATTTTAGTGTAAATTGTTTTAGTGGTTAGTGTTTTTAGT
GTAATGCATAATGTAACGGATTTTGTATTTTACAGCGTAGTTTTCTCCCT
ATAACTATTGGTATGTTAATTTACAATTACTGTTGGTATGTTGATTTATG
ATAGATATCCTATACTATAGCTAACTACAATTGTATTGGTAATGTAAGGC
ATTGTGAGTTTCATATTTCATTCCCAAGTTGTTAACTATGTTTTTTGATA
GACCTTCTTGTTATGCAAGAAATAAAATCTGATCTGTAAGATTCCCTTGC
TGTCTTGTTCAATCTCACAATTTATTTTTTAAAGAACGTAAGGAAGACAT
CCTTCGAAGTCATATACGTAGTCAAATGTAGATACAGCTCTCTAAGCAAC
AATACAACGATTACCTACCCTCCAGTCCGTATTCTGACGTAAGAGGCTTA
TGCGGAAAATAAAAGGAAACACTGCAAGAACTGCTATATATATATCCAAA
AGAATCTGCATTCCGTACCGTCCATAGATCACTATGAAAGGCCTTGCATC
AAAATATAGACGCCTAGCAAATCTGTGGTGTCAAAATCCTTACACAAATA
TCCGAAAACACGTCATCTTGTGTGTAAATGATCACGTACCAAATTCTATA
CGCTCAGTAAATCCGTCCGTATGAAAATCCGTACTTATACACATCGCATC
TGTCCTTTCATTCTAATCCCAAACCCGCTTACTAGAACATCACATTATTC
CACGTATGGAAATCTAGACGGCAGGCAAATTTAGAAGATTAAATGAGCAC
GTATCAAATTCTATACGCTCAGGAAATCCTCGCGTACAAAAACACATACC
TATGTAATCAAGTGTGCATGTGTTTTCTCTCAAACCGACTATAAAGAACG
CCACAGCGGGTACATTATGCACGATTTATACATCGCAAATGTCCAATGAA
AGATCTACAAGCCCGTAAACGGGAGAATTCCCAAACTAATACATCGCACC
TGTCCACGTATGAAAAATCTATACGCCCAACAAATTTTGAATTTCCCAAA
CTAATAATACTAGAACACTAGAAAGGCCGCCATTTGCCCCTGAGCAAATA
CAGCACGTTTAGCCATACTCCTCCCCATGCAAGAAGTGTGCTGTCCCAAA
ATAACACCTGGGCAAATCGAAATATTAACTGCATGTAGAAAGTCAATATT
TGCGAGAGCATCATACTTCGCCAATCTCCCTCCCGATGCATAAATTGACT
GTTCCAAAATCACCCGTGCAAAACAATTCTCTCTACAAGTTCTGCGAGAC
CCCAAGAGCTTCTTACTGCAAAGTCTTACTGCAAAGTCTTCCTGCAATAT
GACCTCAGGTAACCTAAATAGAACACGTGTTCTTTGGCCAGTAGCAAATG
GAACGCGGGGATCCTTAGATAGAACATGGATTCTTTGGCCAGCAGCAAAT
AGAACATGGAACGGGGATACCACTTTTGGCCTGTTTTTGGTCTGAAATGG
GTCCAAAAGTCCCCAAAATGAAGCATTTTGAAGTGATGTACACCAGAATT
GTGATTGAAATCCTGTAGGGACATGTTCAAGGCGCCCTTGTACCGAATGT
CAGGTCATTTGCTTGTAAAACCAGGCCACAGGAGACCAAATTGTAATTTT
TGCCTAAAAATGCCCCAAAAAACCTCCATAAAAATGATTTTCAGGCCTGT
TTCAAAAAAATGAAAAAAATCGCATGAGGGTATTTGCCTTCTTTACCTCC
ATGCCAAATTTCAGGTCGGTTGATTAAAGAATGGCAGAGTTGAATCAATT
TGAAGATTTGGCAGAAGAAGGAGAAGAAGAAGAAGAACGTGAACAAAAAC
AATATGTTGAGCCATACTAGGTATGGCTAAACATAATAACGAGCTGAACA
TAACATCAGTCCGCGTATGAGAATCTATACACCCAACAAATCAGTGTTGA
CATTCCCAGCTCGAAATTCCAGCATAATACAAGAACCTCATACAAGTACT
CGCCTCTGTCCGCCTATGAAAATCTACACGCCCAACAAACGTAGAATCCA
AAATATATCGCATATGTTCACGCATACTTGGCAAGCTCCGGCAAAAAATT
ACTTTCACGGCCAGTAAATGATGACGTATGAAATTTCATACGTCGCCCAC
AAAATCCGTACACATGACAAATCCGTACACATGAAATTGTATACGCGTCA
TAGCATCATTTCTTGAACGTATCATTTCTTGTCTATGCGTCTATTAATTT
TACAAAAGTTAACTTACGAAATGACGCCCAGTAAATGGTCACGTATGAAA
TTTCATACGTCGCCCACAAAATCCGTACACATGAAATTTTATACGCGACA
TAGCATCATTTTTTGAACGTATGGCACTCCATACAGGTATCATATGCGTC
TATTGATTTTACAAAAGTTAACCTACAAAATGGCGTCCTTTAAATGATCA
CGTATGAAATTTCATACGTCGCCCACAGCTGAACCGACTTATACTAGAAG
TAGAACTTTGCAAGGCCAATGATTTGGTACGCAACGGCAGTTGTCTGCCC
GCCGAGCGAACGTACCAAATTTTCCCGGCCGCGTAACAAACTGCCCACCG
AACAGAGGTACAAAATGTACGCCAAGCGAACGTACCAAATTTTCCCGGCC
GCGTAACAAACTGCCCACCGAACAGACGTACCAAATGTTGCCGGCCCGCA
CGAAATTTTGCCGGCCACGTTACAAACCGCCCACCGAGGAGGCGTACGAA
ATGTTGCCGGCCCGCACGAAATTTTGCCGGCCACGTTACAAACCGCCCAC
CGAGGAGGCGTACGAAATGTTGCCGGCCCGCACGAAATTTTGCCGGCCAC
GTTACAAACCGCCCACCGAGGAGGCGTACGAAATTCTGCCAGCCGCCCAC
CGCGCCGCCAGGATTTGGTACGCAACGGCAGTTTCATACGTCGCCCACAA
AATCCGTACACATGAAAAATCCGTGCACATGAAATTTTATACGCGTCATA
GCATCATTTCTTGAACGTATGGCACTCCATACAGTTGTCATATGCGTCTA
TTAATTTTATTAAAGTTAACTTACGAAATGACGTCATTTAAATGATCACG
TATGAAATTTCATACGTCGCCCACAAAATCCGTACACATGAAATTTTATA
CGCGACATAGCATCATTTTTTGAACGTATGGCACTCCATACAGTTGTCAT
ATGCGTCTATTGATTTTACAAAATTTTGGGTTAACTTACAAAATGGCGTC
CTTTAAATGATCACGTATGAAATTTCATACGTCGCCCACAGCTGAACCGA
CTTATACTAGAAGTAGAACTTTGCAAGGCCAATGATTTGGTACGCAACGG
CAGTTGTCTGCCCGCCGAGCGAACGTACCAAATTTTCCCGGCCGCGTAAC
AAACTGCCCACCGAACAGAGGTACAAAATGTACGCCAAGCGAACGTACCA
AATTTTCCCGGCCGCGTAACAAACTGCCCACCGAACAGACGTACCAAATG
TTGCCGGCCCGCACGAAATTTTGCCGGCCACGTTACAAACCGCCCACCGA
GGAGGCGTACGAAATGTTGCCGGCCCGCACGAAATTTTGCCGGCCACGTT
ACAAACCGCCCACCGAGGAGGCGTACGAAATGTTGCCGGCCCGCACGAAA
TTTTGCCGGCCACGTTACAAACCGCCCACCGAGGAGGCGTACGAAATTCT
GCCAGCCGCCCACCGCGCCGCCAGGATTTGGTACGCAACGGCAGTTTCAT
ACGTCGCCCACAAAATCCGTACACATGAAAAATCCGTGCACATGAAATTT
TATACGCGTCATAGCATCATTTCTTGAACGTATGGCACTCCATACAGTTG
TCATATGCGTCTATTAATTTTATTAAAGTTAACTTACGAAATGACGTCAT
TTAAATGATCACGTATGAAATTTCATACGTCGCCCACAAAATCCGTACAC
ATGAAATTTTATACGCGACATAGCATCATTTTTTGAACGTATGGCACTCC
ATACAGTTGTCATATGCGTCTATTGATTTTACAAAATTTTGGGTTAACTT
ACAAAATGGCGTCCTTTAAATGATCACGTATGAAATTTCATACGTCGCCC
ACAGCTGAACCGACTTATACTAGAAGTAGAACTTTGCAAGGCCAATGATT
TGGTACGCAACGGCAGTTGTCTGCCCGCCGAGCGAACGTACCAAATTTTC
CCGGCCGCGTAACAAACTGCCCACCGAACAGACGTACAAAATGTACGCCA
AGCGAACGTACCAAATTTTCCCGGTCCGCCGAGCGTAGTCTGTATAACGC
AAACTCCAGCTGTCCGGGGGTTTCTCTCCCCTACCCTCCGTGGGTGGATA
GCCGTTACAGGCGGCGGGCGGACACGGGGCTTGGCTGAAACCAGGCTACG
CCGAGCGAACGTACCAAATTTTCCCGGCCGCGTAACAAACTGCCCACCGA
ACAGACGTACAAAATGTACGCCAAGCGAACGTACCAAATTTTCCCGGTCC
GCCGAGCGAACGTACCAAATTTTCCCGGCCGCGTAACAAACTGCCCACC Coding sequence (CDS) from alignment at xpSc0039787:9786..16584+ >Blg01197.2 ID=Blg01197.2|Name=Blg01197.2|organism=Branchiostoma lanceolatum|type=CDS|length=1176bp|location=Sequence derived from alignment at xpSc0039787:9786..16584+ (Branchiostoma lanceolatum)
ATGATGCATGTTAAGTCATATTTTACTTGTTTTAAACGTTTGACGTTCAT
TTTGTTGCATCAGACTATCAGCGTGATGCTGACCGCCCACTTCGGTCACA
AGGGGTACCATTTCCGAAAGGCGGAACTCAGACCCGCCTTCTGGCCCGAA
CAGCTACAGTGGAAGCCCCCGTATCTAATGCCTGAGTGGTATAAAGAAAA
CACCACTCCCAAAGATAGAAACTGGACAAGGGACGGGCTGGTGCCCATCA
TAGAGGCGGGTTACCGCTACTATGGGTACGACCCGAATGTCCACATCGAG
GCCGCCCAGACAAGCGACACCCCCAGCACAGCCACGGGCGCCGACCCTGA
CACCATGGAGGAGGGGCTCTCGCGGCCGGCTGCCCCAACCGACCGGAACA
GCGACACCCCCAGCACAGCCACGGGCGCCGACCCTGACACCATGGAGGAG
GGGCTCTCGCGGCCGGCTGCCCCAACCGACCGGAACAGCGACACCCCCAG
CACAGCCACGGGCGCCGACCCTGACACCATGGAGGAGGGGCTCTCGCGGC
CGGCTGCCCCAACCGACCGGAACAGCGACACCCCCAGCACAGCCACGGGC
GCCGACCCTGACACCATGGAGGAGGGGCTCTCGCGGCCGGCTGCCCCAAC
CGACCGGAACAGCGACACCCCCAGCACAGCCACGGGCGCCGACCCTGACA
CCATGGAGGAGGGGCTCTCGCGGCCAATTGCCCCAACCGACCGGAACAGT
CTCAGCCCGAGCCCCAGCCCGAGCCCGATTCGAGGCCCCAGCGCGAGCCG
AAGACCGAGCCCGAGGACATCCACTCCCACGAGCCCCGGAATGCAACCTC
CCTTGGGCTCCATCATTTCTGAAGATGGGAGCCTGGGGGGTTGGGTGCCA
AGCACAGCTGTTGTCGCCAAGCGGATGGCCTTCACCCCTTGCCCAGAGGC
AGAGGACACAACGCCACCAACAAAAAGGCGACAGCTACCATACCAGGAGC
CTAACGAGACTGTGTTGTGGGATGGCGCTGCCACCAAGACAAGCGTGAGG
ACACCCGAATACAAGCCGGTCTCTAGTATCGCAGCAAGGAAGAAGGAGAA
GAAAAGTCGTTCCAAAAGGACACGGGCCGGTAGGATCGTTAAAAAAAAGA
AAAACTACACCCCTTCCATTGCATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01197.2-exon-xpSc0039787-1570713199:9786..10049 | Blg01197.2-exon-xpSc0039787-1570713199:9786..10049 | Branchiostoma lanceolatum | exon |
| Blg01197.2-exon-xpSc0039787-1570713199:10515..11325 | Blg01197.2-exon-xpSc0039787-1570713199:10515..11325 | Branchiostoma lanceolatum | exon |
| Blg01197.2-exon-xpSc0039787-1570713199:11707..16584 | Blg01197.2-exon-xpSc0039787-1570713199:11707..16584 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0039787 | genome | xpSc0039787:9786..16584 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01197 |
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