Blg01200.0 (mRNA) - B. lanceolatum

Overview
NameBlg01200.0
Unique NameBlg01200.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Full-screen view
Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000158:262887..264215-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01200.0 ID=Blg01200.0|Name=Blg01200.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1329bp|location=Sequence derived from alignment at Sc0000158:262887..264215- (Branchiostoma lanceolatum)
ATGGACGTATTTTCCGGTAACGTGTCGTTACAGAACGATACCAGTCTTTC
CAACGGAACGGAAAGTGCCTCCGACACAATGGGCATTTCCTGGGAGTACT
ACGTCCCACCAGTCATCTTTTCCCTGATTTTCGTGGTGGGCGTTACAGGT
AACACATTGGTTTTATATGTGGTGGCCTTCTTCAAAAAGATGCAAACCGT
CACCACTTGCTACCTGGTCAACTTGGCGGTGACAGACCTCGCCTTCCTGC
TGTGCTGCGTGCCCTTCACTGCGGTCAACTACTTGACGACATCTTACGTT
TTCAATGAGGCCATGTGCAAGTTCGTCAACTACATGATGCAGGTAATTGT
TGTTTACCACAATTGAAATAGGAGGTGTTGGATATGCTGTGGTCTTGTGT
TATCTTAGCTGTAACCACATGGTTGAGGTGGGTGTTTTTAACCTGTTTAT
ATTCAAGTACAAAGTGGGGTGGACGTATAACTCAGGACATCATCCTGCCT
GCTTGTTTCCATTTCTAATCAATAGATACATGTAGTTATGGCTCTTACCG
AGGGTAAAGAAAAAATCGAAATGAATAGAGCATGACAAAAACTTTCATCT
GTTGCCAGTCGATAAAAGTTGCCATTTGTATGAAATGTGATCTGAATTTT
GACTTTCTGTATATTTACAATGAAGAATTTTACAGTTGCACTGTCTCTTT
CTAACAAAGGCGACCTGCAGCGACCACTTTACAAATGCTTGATTTTTTTG
TTGCAACGTTTTTCGACATTCTATTCTGCACATTTTCTTTTTAAAACTAG
GTGACCGTCCAGGCTACCTGTTTGAGCTTGGCCTTGCTCAGCCTTGACCG
CTACTGTGCCATACTGCACCCCATCTGGTCCCTATCCTTCCGACGGAAAC
GAGTGGCCATCATCGGCAGTATCATCGTCTGGATCGGTAAGCTGTATTTG
TAGTAATGTTTCGTTGACCTCATTTCTATCACGATATACATGTGCGCATA
CGAACACGCGCGCATACATACCAACACGCACGCACACACACACACACACA
CACACGCGCACGCACGCACACGCACACACACACACACACACACACACACA
CACACACAAACACACACACACAGAGCCACAAAGACATACACACAGAGCAG
TTGAAATATTTTAAATTGCATCCCTTGCAACATGCACTAAATCTTCTGGC
AATGCATTTGACAGAGTTGTGCGTCTCAATTTCTGGTATGTGTCTCCAGG
TCACGACACTACGGCGTTCTACGAACTGTCTTGGGAGACCTGTTCAGTTT
TGCTCAGATCCCACAAGACAGCCATATAG

Coding sequence (CDS) from alignment at Sc0000158:262887..264215-

>Blg01200.0 ID=Blg01200.0|Name=Blg01200.0|organism=Branchiostoma lanceolatum|type=CDS|length=558bp|location=Sequence derived from alignment at Sc0000158:262887..264215- (Branchiostoma lanceolatum)
ATGGACGTATTTTCCGGTAACGTGTCGTTACAGAACGATACCAGTCTTTC
CAACGGAACGGAAAGTGCCTCCGACACAATGGGCATTTCCTGGGAGTACT
ACGTCCCACCAGTCATCTTTTCCCTGATTTTCGTGGTGGGCGTTACAGGT
AACACATTGGTTTTATATGTGGTGGCCTTCTTCAAAAAGATGCAAACCGT
CACCACTTGCTACCTGGTCAACTTGGCGGTGACAGACCTCGCCTTCCTGC
TGTGCTGCGTGCCCTTCACTGCGGTCAACTACTTGACGACATCTTACGTT
TTCAATGAGGCCATGTGCAAGTTCGTCAACTACATGATGCAGGTGACCGT
CCAGGCTACCTGTTTGAGCTTGGCCTTGCTCAGCCTTGACCGCTACTGTG
CCATACTGCACCCCATCTGGTCCCTATCCTTCCGACGGAAACGAGTGGCC
ATCATCGGCAGTATCATCGTCTGGATCGGTCACGACACTACGGCGTTCTA
CGAACTGTCTTGGGAGACCTGTTCAGTTTTGCTCAGATCCCACAAGACAG
CCATATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01200.0Blg01200.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01200.0-exon-Sc0000158-1570713199:263874..264215Blg01200.0-exon-Sc0000158-1570713199:263874..264215Branchiostoma lanceolatumexon
Blg01200.0-exon-Sc0000158-1570713199:263280..263415Blg01200.0-exon-Sc0000158-1570713199:263280..263415Branchiostoma lanceolatumexon
Blg01200.0-exon-Sc0000158-1570713199:262887..262966Blg01200.0-exon-Sc0000158-1570713199:262887..262966Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000158genomeSc0000158:262887..264215 -
Properties
Property NameValue
GeneIDBlg01200