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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000158:411397..418688- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01218.1 ID=Blg01218.1|Name=Blg01218.1|organism=Branchiostoma lanceolatum|type=mRNA|length=7292bp|location=Sequence derived from alignment at Sc0000158:411397..418688- (Branchiostoma lanceolatum)
AGGAAGAGGGTGTATCAAACATGAATGAGACATCCTCATGCATTTCCTGT
TAGATGCTTTTGAGAGAAGCCTCCTACAACAAAATCATCGTTTAATGCAA
ATATCCTGTGAACTTAGGACTGTACGTGCATCATTCATTACCCACCTGCC
CCTGAGTCATTCATGGCAGCTAAGGATGACGCAATGTCTTATTTTTAGAT
TTCTGTGGACGATACCAAACATCACAAAAGGGACACCTGTGTTGTGCAGA
ATTTCATTTTATTCACACATTTTGTATAAAAATGAAAGACAGTGACTATG
AGTCAATACATATAAGTGATATAGATACATTCGTACAGAAACAAATGTCG
AGAAAAGCATTGTATTTACAGATTTTTAAACATTTATCTCCCTCTAAAGT
AATGTAGATGGTACCACACCCTCTCGTCACATGACGTACCTTGTGACCGG
TGACGTCACGAGTCGTCTGTCTGAGGAGCTCAAATTACCAGCTGAACCCG
CGAAGGAAGGAAGCAACATTTTTACTTTCTTGACGTTTTTCGGTTGTAAG
TATTCATTCTTTTCGCTTTGTGAGCTTTCCTTTTGGTTCTCGACCTCATG
TTTTACAAATAGTGAATGATGTTATGGTAGAGGAGGTTTCAGTTTGATAT
TTTTGGCCCAAAACTGTATGACGCAGAACATATTTTCTTCAAAATTCTTC
CTTCGAAAAATCTCAAGTCTCAGGAGACTGTCAGCTTAGGGCTTGGTAAG
GAAATGACATAGACATATAGATAGATAGGAAGCAACACGCTCTTGAAATT
CATGCTTATCAATTTTGTCAAACAAAATCTAACGTTGCACCTATTCTATA
AATGTATATCACTCAGTGGATGTGGTGGGCAGGTAATGTTTTAATATTAA
GGGGGAGTTAACCTACACACCTGTTAGTCGGATCTAAGAAAGAACAGGTG
AACCTTTTTTTTTCTCTGAGCAACAAGCAAAAGACGTGTGGATACGATGA
AGTATTTTTCAATCTTATTGTCATCATTTATATTTAAAGAAATGTCCAAT
CAATTATGGTAACCAAATTTACAAACTTTCTTGCATTACATTTATTTCTG
TCAATTCCGTAATGGCTAGAGTCCTACATGGACATGTAAGGTTTGGTTTA
TGAATATCATCACCAATAACGGAGACTAAGATCTTACACTTTCAAGGTCT
TTATTTATGTTTTTCATGGTATCCGTTCTTAGTCAATGTCTTCATTTTTT
TCAGGAATTGAGAGAAAAAGAGAATCCAAGATGTCGCTGTACCCATCACT
GGAAGATATGAAGGTGGACCAGATGGCCAAGGTAACTACAGCACATGTAC
TTTTTGTTCTAGTGTTAAAATTCTTCTGCATGATGTTGGCATGTAGAGCA
AATTAAAACAGTTTCATTCTCGTATGATAAGGAAAGATTGTCACAGTTGC
TTTGGCCTTTGCATATGAAGGTTCATGCAGTAAGTTCTGCTAATATGAGA
TCAGAGAACAGAAGTGATGGCCATGCTAAAGTGTTGTTCATTTTAGATAT
ATTTAGATTTGAAGCTATTGGCATGTTGTGGCTTATTGTTGTCATATTCT
ACCAATCTGCTGTACAACCAGTGATAAATATGAGGTGATACTGTAATTCT
TGAAATTTTTGCGGTGACTTCACATGTTCTCAGTTTTTTTGGTGACCCTT
CAAATCTGTAAAGGCACATTGTTTCCATAACTGTATAGTATGTGACTACA
GCACAAAGAAGAAAATGTAGCTTTCACAGTTTTGGTTGCTTAATGCCCCA
CTTACCCTGTACTGCGAAATTAAAACACAGCAAACTTAAGGCATTTACAG
TACCATAAATATTTATCTAATATGTGTGCTTGTCCCTTCAGGCACAGGTG
TGCCAGGCAGGTCAACAGGCTGCTGCTATTCAGGCACCTCCACAGTACCC
TACCCAGGCACCGGCCTACCCTACACAGCCTCCAGCCTACCCTACAGCAC
CACAGCCAGCTGGAGCCATGCCAGTTGCTCAATGTGAGTATAAGCTGCTT
CACAGTTTAAATTGAGTGTGCATGTGTAGTGTGTTGCATTGAGGGTAATA
TGTAGCTCAAACCGTGAACTGGCTGATTGTCAAATCCATGCAAACATTAT
AAATCATAAATACAATTTACAGTTTTACAGTTGAACCTTTTTAGTCTTTC
AAGGGACTCGTAACCACTATACTAGTACTAGTAGAGAAAAGGCCAATTTA
ATGACCATGAGTAGCAAGAGACATGTGCTTTCAGTATCCACTGAGATACT
TTTATTCATAAAAACAAATTGTGAAAATTGGACAGTCACATTTTTAGACT
TACAATTCAGTAGTTCTTACGTATACTATATACTGTTCAGTCCTAACGTT
ACATGTACACTTTACAAACAGTACTCGTTCTTCCTATACTGTACAGTACA
GTACAGTACTACACTTAACACTTTACTAACCTGTGTATTTATCTGTACAG
TCAGCCTATACCCATCCCTGGATGACTACATGGGACTGAGTCTGACCCCA
GACGAGGTGAGAGCCAACATGCCACAGGTCCTGGAGCCACCACCATCGGT
AAGTTCAACATTTCTTACATGTTATCTTCTCCATGGCTTGTATTTGCTAA
CAAAAAGATTGGCCAGGCCCTTTGATGGCTGTGAGACTTATCCTTGTACA
TGTGAGTCAGGTTGTTGTGTGTGTCTGGGGATGCTGCTTAAGAACTTAAC
AGTGACCCCCTCTCTTAACATTTCTTGTTGTGTGAGTCTAGAGATGCGGC
TTTATAACCTTACTGTGCAAATGCCCCCCTCCAAAATTTCCTTTATCATA
TACTAATACAAACATATAGTTTTATCACAAACAAAAAGCCACTTCTACCT
ATATCTGTATTATACTGGGACAGTAAAATTAATGTATTCAGTTGTGATTG
TTAGCATGGAAGCTAAGACGTGACGGTGGCTGAGAATTCAATGAAATGCA
CATTATGAATAAAATCTTGAAACTTTTGTGGTGGTTTCATTCAATATGGT
TTTTGAAGTGACCTTTCTACTGTGACTATGTCTTCCTTGTGTTACCACAG
TGACTGTACTTCAAAAATCTCTTTTTCCTTCTTACCCCTTAAATGAAACA
GCCATGAAAGTAAAAGATTTTGCAGTATCCTATGTTTGACTGACTATCAC
ATGAATGTGACAAAGTTTCTATACCATGTTGTGAAACATTTTCCCTGCGC
CCATGTAGCAGGCCGTCGTAGCTCGTCCCCAGGGGACCGTGGTGACTGCG
CCCATCACCGGGAACAGCGTGGGTCTCCAGCGCGCTGAGATCAAACAGGG
AGTGAGACAGCTGATGTGCTGTAAGGACGCTAGCGGCAAGATCGGCCTCC
GAGTCAGGCATGTCAATAAGGTGGGTGAAGTAAAGGAATGTCTGTATACT
AAATCTCCAAGCAGAGGAAACTGGGCATATGATAAGATGTGATGGTTCAA
AGATAGGTAACTTTTGTTTCTAACAAAATTCCTTTTTTTTTCTATAGTGG
GGAACAACTGCCTAGCACCCCATATTGTGTACATAGGCCCCATTNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATCAAAAAAG
CCATAGAATTTCTCATTTTAACTTAGAATCCTCTAAAACTCCACATTTTA
GAAGGATGGAAACTAATAGTATACTATACCCCCGTTTGGTTGCTTCCTTG
CTATGCCACCACATGTTTTTTTCTCTTGAAAAAGCCCTGTAAGATAAAGA
TTAAATTTTTATGTTTTATATTTTCCAGGGTGTGTTCGTGGCTTTCGTGC
ACAATGGCTCCCCGGCGGCGCTGGCAGGCCTTCGCTTTGGTGATCAGATC
CTGCAGATTAACGAGGAGGTGGTCGCTGGCTGGGACATGGAGAAGACCAT
GAAGTACCTGAAGAAGTGCCCACCTGACAGGATCATCTTCGCTGTCAGGG
ACAGGTGAGTTCTCCACACAGTATACATGTAGCTGTGGGGGCAAGGTGGT
CTTGTGGTTAGGCTTGTTGACTTAGAATCTCAGGCAGGCCCTGGAAGCAT
TGATAAGAATCCTGACTATAGTGACCACCTGTCAACATGAACCAGATTTT
ATCTGTTGCTTGCATGGTCTTCTTGGGCAGTTTTGCTTGTAGTCAAAATT
AGAAGTAAAGCTAGTACGTAGTATAATAATTATTATACTTTTCATCATCA
TCTCATCTGGTTCTGACTGTCTCACGGATGGTCATGGCCCTTCCCCTCCA
TCCCTCCCTTACTTTTCATAACTGATCACAAATCATTTATTCATTCAAAG
ATACAATTTTAATGATAGTTGTGGTTGTATTTATTCAGGCCATTTGAGAG
GACCATCACCATGCAGAAGGACAGCTCCAACCACATCGGCTTTGTCTTCA
AGAACGGCAAGATCACGGCCATCGCGAAGGACACGTCTGCCGCTCGGAAC
GGCGTTCTGATCGAGCACCACCTCATCGAGGTCAACGGACAGAATGTTGT
CGGACTGAAGGTACAGCTAGTTTAGATTTGTTGTTCATTACTTTTATAAT
GTCTTCATGTTTCCTTGTTATACAATCTTTATAATTGTAGATGATATCTA
AACACTATGTCATTGTCATTGTCATAAATTTCACCTCTCATCTAGATTTA
CGTACTAAAAAAGTGATGGTTGTAACTTATGATGCAATATGCCCTAACAT
GTTAATGCATGCAAATATAATGTATAGTTAAAGGAATTACCAGAGTGCAC
TTTTTCCTAAGACTGCTAGGTGGCGTTGTTGTCAGATGGACATGTAGCAA
AGTCTTCTGTTGTGTGTCTGAAACATGGTGCTTGCACTGTAGTTATGATA
ATGAAAAAGGGGACAGGATAGTTTATCTTTGTTTATGTGGTATGAAAGAC
GTGTTTCTTTATGTGTTAAATGGATTAAGACATTGTTAACATTTTGTTTT
CTTGTCCTCACAGGATAAGGAGATTGCTGAGATCATCGCAGCAGGGGGAC
AGAGTGTTACCATCACCATCATGCCCACCTATGTGTACAACCACATTGTC
AAGAAGTAAGTCCACTTGATATGCACAAGTTACAGTTGTCATGCCTTTTC
AAAATTATGATATATACTTTTTGAAATTTGTTTATTCTTGCGAGGACTTA
TAGTTTTATTAGTAAAACTGGAAACATAAAAATCATACTGTAAGTTATTC
TAAACAAAAAAAAACACTGCAAACATGTTAAAGATTTACAGCATAAGCCT
TTTTAAAAATGGATGAAATTTCCGAAAGCTAAGTTGTAGACTTGCATTGT
AAACCTGGGCATGATTGTTTTTTTTCCTGCCATGTATCTTTCTTTGAGTG
ATCATATTTTTAGTATTTATCACATATAGTATTAATCTGATGAAAAAATG
TTATGTTCACAGCATGGCAGACAGCCTGGTCAAGAAGATGATGGATCACT
CCATTCCAGATCTGTAAGCCGCCCCTCCCAGGACTCTAACATCAGGCAAA
CATTCATAGTACAGGGTTCTCTATAGAACTACTGCCTACATTTTGTACAT
TTCTCATGTAAAGGAGGCACCATATTGTCCAAGCATTAATGAAAACTGAA
GATATATAAGGGCTGTAATCTTGTATAGTTAAAAACTGTGGCTTATGGAC
AAGACTTAGTGACATACGTGATGGTACCGTATGCAGGACTTGTATTCTTA
TATTCATCCTCTGGAGATAATACTACCTTTTGTGTGTACCGTTTGCCTCA
AAAGTATATTGGAGCTATTCTTAGTAGATTTTGAGCTGCAATTTGGGATG
AAAGTACCAGTGGATTAATAAGGCATGACACACAGTCATTCAAAATTGTA
AGATAAAAGTTTAACTTACTACCTAGATTTTATTGTGTTTTGCCGAACAA
GGGTGAAAATTTTGGATCTTGTTAGTTTATGTTTAAAACATGATAGCAAA
GCCTCCAAAAGACACATGCCTTCTTTTAATATATAGCATGTAGTATCATG
AATTTCCTATTAGTGAGTGAAAAGAGCTGGATGTGGGTATCATTCATTCC
AATAATGGTTTTATTGTCAGCATGTCCTAGATAGAGTAATATTGCAACCA
AGAATTAAGGCCTTGATATAAAAGTGAGATTCCAGCATTAGAGGATGTAT
GATTTTATAATCTGTAACGTTATACTCTATACTATATAGGAAAGACTAAA
AGGTACTTGTCATTATTGGCTTAAAGCTGTTCTCAAACAAAAAATGTTTC
TAAACAACTAACATATTAAGAGAATTTTAATGAATTATTGTTAATTGTCT
GTGACAAGTTTGATGTGTTTTTATACTTAATTTTCTTGATTTCTAAAGAA
AAAACAATGCAACTAATAGATGTGTCTTGACCAAAGTTTATACTGAATCG
CAACATTGAGGAAAAGTAAGTCTGTCTTTCATCATGTTAAGTGCTACAAA
GTTTTCTTCTACATTCAATTTTGTTAGCAATCTTCTACAATTTTTGATTT
TTACAATGTTTAGAAAAGTTATATTGGACCTCTATTTTGACATTAGGATT
TACTTGACAAGCAGCATTTAGACCAGCATCTGTAAAGAGACTGTATATCT
GATATTACTTTTGAATCCCTACAAATGTCAAATAAAGTTGAAAGTGCTCT
TCACTGCAGTTACTGACAATGGATGTTTTCTTTTATGACTAGATTTTTGC
TGAAAGGTATAATTGTGACTTGCTGGTTTTCTGAGGTATTTATTTTACAG
AAAGTGCAAAACTGTACATTTTGTAATAGTAACAATGGCTAATATAACAC
ACTCTTACAAATTTAGGATGTTAACATTAAGTGATACTGGGTAACAGATT
TTCTCCATGTTTTTTTTTTCATTTGCTCACAGAAATATTACTAATTAATA
TGTTGATGGACAGCTAGTTATTCAACACAAAATTCATAGGACAAGTGTTG
TTTTTGCATACTTTTTTAAAGTTTCACACAATCATGCTCATCTCTGCATA
AGTTTGGAAGAAAACACAACTCCAGGTTCAGTTTCAATATTTATTATGCC
ATGAATATTTGTATCTCACAACATTGAACAATATTTCAAAAATAAAAGAT
AAACTTACTCTTGCATTATAAGTACTGACTCGGATTGTCAAAGCATCCTT
CACTGGTAATCAAGCAAGAGGTAAAGTGACCAATCATTAAAAAAATTTTT
TAAAAACTGACCAAGACTCAAGGGGACCAACAAAATCTGGTC Coding sequence (CDS) from alignment at Sc0000158:411397..418688- >Blg01218.1 ID=Blg01218.1|Name=Blg01218.1|organism=Branchiostoma lanceolatum|type=CDS|length=948bp|location=Sequence derived from alignment at Sc0000158:411397..418688- (Branchiostoma lanceolatum)
ATGTCGCTGTACCCATCACTGGAAGATATGAAGGTGGACCAGATGGCCAA
GGCACAGGTGTGCCAGGCAGGTCAACAGGCTGCTGCTATTCAGGCACCTC
CACAGTACCCTACCCAGGCACCGGCCTACCCTACACAGCCTCCAGCCTAC
CCTACAGCACCACAGCCAGCTGGAGCCATGCCAGTTGCTCAATTCAGCCT
ATACCCATCCCTGGATGACTACATGGGACTGAGTCTGACCCCAGACGAGG
TGAGAGCCAACATGCCACAGGTCCTGGAGCCACCACCATCGCAGGCCGTC
GTAGCTCGTCCCCAGGGGACCGTGGTGACTGCGCCCATCACCGGGAACAG
CGTGGGTCTCCAGCGCGCTGAGATCAAACAGGGAGTGAGACAGCTGATGT
GCTGTAAGGACGCTAGCGGCAAGATCGGCCTCCGAGTCAGGCATGTCAAT
AAGGGTGTGTTCGTGGCTTTCGTGCACAATGGCTCCCCGGCGGCGCTGGC
AGGCCTTCGCTTTGGTGATCAGATCCTGCAGATTAACGAGGAGGTGGTCG
CTGGCTGGGACATGGAGAAGACCATGAAGTACCTGAAGAAGTGCCCACCT
GACAGGATCATCTTCGCTGTCAGGGACAGGCCATTTGAGAGGACCATCAC
CATGCAGAAGGACAGCTCCAACCACATCGGCTTTGTCTTCAAGAACGGCA
AGATCACGGCCATCGCGAAGGACACGTCTGCCGCTCGGAACGGCGTTCTG
ATCGAGCACCACCTCATCGAGGTCAACGGACAGAATGTTGTCGGACTGAA
GGATAAGGAGATTGCTGAGATCATCGCAGCAGGGGGACAGAGTGTTACCA
TCACCATCATGCCCACCTATGTGTACAACCACATTGTCAAGAACATGGCA
GACAGCCTGGTCAAGAAGATGATGGATCACTCCATTCCAGATCTGTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01218.1-exon-Sc0000158-1570713199:418568..418688 | Blg01218.1-exon-Sc0000158-1570713199:418568..418688 | Branchiostoma lanceolatum | exon |
| Blg01218.1-exon-Sc0000158-1570713199:418144..418289 | Blg01218.1-exon-Sc0000158-1570713199:418144..418289 | Branchiostoma lanceolatum | exon |
| Blg01218.1-exon-Sc0000158-1570713199:417358..417434 | Blg01218.1-exon-Sc0000158-1570713199:417358..417434 | Branchiostoma lanceolatum | exon |
| Blg01218.1-exon-Sc0000158-1570713199:416656..416797 | Blg01218.1-exon-Sc0000158-1570713199:416656..416797 | Branchiostoma lanceolatum | exon |
| Blg01218.1-exon-Sc0000158-1570713199:416091..416188 | Blg01218.1-exon-Sc0000158-1570713199:416091..416188 | Branchiostoma lanceolatum | exon |
| Blg01218.1-exon-Sc0000158-1570713199:415269..415430 | Blg01218.1-exon-Sc0000158-1570713199:415269..415430 | Branchiostoma lanceolatum | exon |
| Blg01218.1-exon-Sc0000158-1570713199:414685..414860 | Blg01218.1-exon-Sc0000158-1570713199:414685..414860 | Branchiostoma lanceolatum | exon |
| Blg01218.1-exon-Sc0000158-1570713199:414129..414300 | Blg01218.1-exon-Sc0000158-1570713199:414129..414300 | Branchiostoma lanceolatum | exon |
| Blg01218.1-exon-Sc0000158-1570713199:413584..413675 | Blg01218.1-exon-Sc0000158-1570713199:413584..413675 | Branchiostoma lanceolatum | exon |
| Blg01218.1-exon-Sc0000158-1570713199:411397..413226 | Blg01218.1-exon-Sc0000158-1570713199:411397..413226 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000158 | genome | Sc0000158:411397..418688 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01218 |
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