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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000158:379062..385656- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01237.3 ID=Blg01237.3|Name=Blg01237.3|organism=Branchiostoma lanceolatum|type=mRNA|length=6595bp|location=Sequence derived from alignment at Sc0000158:379062..385656- (Branchiostoma lanceolatum)
AAAATGGAGTGTTCGCGGTGGTTTAAGTTTGCAGTTGAAACAAAGGGGTA
ACAGGAGAGCTCACTACGATAAACGCGAAAATAAACCCACCGCGAACATT
TCCACTTTAACAGTATTTGTCCCATAATGCACTGGAGCCAAGATGGCTGC
CTCCATCAGAAAATCCACGTTAAAATTTATCGGTACTTAGTTTTCTCTTC
AGATTACCTGGATTTTCGGAATTAGACTTTGCGATTGAAATTAAAATGTC
TAAACTGTACTGAACTGTTTTTTTTTTCTTTCCCATACAGATATAGGGGT
GAATTTGACAGGTAAGTGTGTTATTTAAGTTTTAGCCCCGCCCCCCTCCC
CACTTTATTCTGCACATAACATGTAGTAGTCAGCTGTTCTGACAGTGTTC
ATTATGCTACAGTTCTGTAAGGTTGAGGTACATGTACGTTTGATAACGCA
AAAACATATACAGTCAGATATTTAAATAAATTATATGCATTATCGACTTT
GTAATATTAATGCCACGGCAGCATTCCAATTTGACCCATGTTTATATTTG
AAATATTATATGATAACATTATATCCCATCCTGGTGTTGACAGGATATAT
CATTTTCTTTCTCAGATGGAATGTTCAGAGGACTGTACCATGGTTCACAG
AAGCATCAGGGTAAACTTAACAGTCTTGTCTTTATCTTTTTTTTATGATT
TAAGACTATAGAAATAAAGAGTCGGACTGAGGGTGAAGCATGATGCTTTT
TCGTTAGCTAGTGGTGCAATGCGGCTTTGCTACGGCTTGCATGTTTTTGA
CCAAGCACATCAGGTCACCCCTACTCTTTTTGATAGAAACAGGGCACAAA
CCTTAAAGTTGAGACTTGTAAAAATGTTATGGGAAGCATAGTTTTAGGTA
AATCAGAACAATATCTAGAGTTTGAAGAGCCTATTACGTTAATTTTTTTC
CATTCCCCGAAATGTAACGTCTACTAACCAGGGTACATAATTCCACCACC
CTGAAAAGATACGTCAGATCTACAACCTACCTTCCCCCAGTATAACACTA
TAATGCTCTCCTGTATATCTAAATGTGCATACAATGTACCTAGGGGATGC
TGCACTAGAGATCTCTCAAACCCATTGTATTTCAAAGTTGCAAATTTATG
TAACCTGGTGGATTAATGTTAATGGAGGTTACTTGTATATATATGTAATG
TAACTTCATCCCCAAAAGCCTGCAACAGTCTTTGTTTTGATTAAAGGCAC
CCAGAGCATTTTATGAGGCTTGAAAACTGAAAAGACTCTAGTCGTTGCAA
TCTTTATGAAATTAACATTTAATGCCACTGTTGACCACATTTGTGTGCGG
ATTTCTTAGAGTTTTTGTATTCAAGTTTCAAGCCTCATAAAATGCTCTGG
ATGCCTTTAAGAAATAGGCAATTTCTCTAAAAAATTAATGGACTTTTTGA
TTTTGTTGATTCTAGATGACTTACAAGATGTACTTGAACGTGCCTTCGAC
AATGGAGTTGAAAAGGTACGTTACCACAGGTAGTTTAGAGCTTTTGTCAA
TTATGAATTTTGTCATATAAAATTATGTATCAATATGTCAGAGATGTGGC
TCTTAACTGCATGATGTAAGCCTGAAAATCTTGTAAATCAATTATAGGCA
AATGATAACTGTAGATTAATCCTTGACAGATCATGGTGACTGGTGGAAGC
CTTCAGGACAGTACCGAGGCTCTCGAACTTGCAAAAACAAATGGTGAGAG
GATTTGGTATGTTTGTTTGAATGACAACCAGTTACTGACTTACACAAAAT
TAAAGTTGAAATGTCAGACTTTGAGCATGCATATATTTGAACTTCCTGAA
CATAAATAGAAACAGGTTTTAAGGAAACAGTTTTTCATGGTTAAGAGGGT
ATTAAACACCATAGCCCACATCACAAACACCATAATTACTAGTTCACGGA
TAATTGTGTCCTTAAGCCCCGTCACAAATAAGGAATTCAGCTCAGCCGAC
GTGTTGGCGAGCTTCAAATGTGCATTTTCGGCCGAAGTACGGCCGACGTC
CTGTCGATTACGTGGGCTTCGGGCGATTTTTAGAAAGAAAAGTTGATCCA
AATATTGGCCTCTTACCAGGTTAGTCGATACTGACTTCGTTCATGTCCAA
GAGATGGTACCATCTCATGGGGGATTTTTAGTTTTTAGTGTTTGTCGGAC
GTCGCCCGACATTTGCATTGGAAAATACGGTCGACGATCGGGCGATTTTG
AAATTCGGCAAGCTTCGGGCGATCTACAAAGTCGGCCGACGCTCGCATGA
ATTGTGACGCCGGCTTAAGGACTGTTGTCATTACAGATGCCCTATATAGT
ACCGTCGGGTGCCATCCCACCAGATGTGGAGAATTTGAAGAGTCTGACCC
TGAATCCTATCTGGAGAAGCTTACAGAACTCGTAGAGACCAACAGGAGCA
AGGTGGTGGCAGTGGGGGAGTTTGGACTAGGTTTGTGATATTACTTTTAC
TCAAAATCTCAAATATTGAAATCTCGAAATATTTGCAGTAGCTTTATTAT
CACATTTTTAATGGTGACCTCTCAACCACAAATTTGTGACACCACGACTA
TGCCTTTTCAATGTAATTACTACTTTTCTGAATAAGTGTTTCAACAGTAA
ACTTAAAACACAACAACAACCTTCTATAATTGCAAAATGAAATCTCTGCA
AAATAAGATTTGCTGAATGGTATCACTTTGCCCAGCAGAATTCAAGTTGT
GTAAATTGTGTGGTGGAATATTTGTCAAATGTTTTTGAAATTGATACATG
CCATATATTGACATTCTACAAAAGATTAAGTGACTGTGCATTCATTGTAT
TTTGCCATACAGATAATTATATACATTTATCATCAATCGTACGAAAATCA
TGGGATTCAAACTATTTTCAGACTATGACAGGCTCAACTTTTGTGCAAAG
GAAACACAATTAAGGTAAGCATGACAAAATGTCAATTTCAAATGTGCAAT
GAAATCATAATTTCAATTGGAATGCCATTATGACAATATCAACTATCTGA
CTGAGTAAAACAGGTTTTCTATGATTCTCAACATTATGTTGACTGTCGTG
GTCTGAAAGGAAACGTTTATTGATGTTTTCAGGTATTTTGAGAAACAACT
GGGCATTGTGGAAAGAACCAGGCTCCCAATGTTTCTACACTGTAGGAATG
CTGCCTCTGATCTTGTTGGTGAGTTTTGACATACCGGGTATAACCATTTG
TCCAATGTTTTGTTTGTTTTCAAGCTGCTTACCTTTAGCTTTAGATATAG
TTTTAGCAGTTTACACTGAGAGTACCCAGAATTGAGTTGCTGCAGTTAAA
GGAGTTCTGCTTTTTTTTGCTTTGTCTCTTTCTCTATGTACATGTACATA
TTGCTTACGTTAACTAGTTGATTGAAAGGATCAGTTTCATGTAAAAGACC
ATACATGTTAAAAGACTGAGTTTAAACTATAATAGTTATAACAGGTAATT
GTATCTGTGAATATGTGCAGGTTTTAGTCCATGAATTTTACAATGTCATT
TGCGGGTGCCGCTTAACTTTGAATGTCATGCTAGTTTTGAATACAGATTT
ACATTTCACCACATTAATTTTGAACATTCTTATTTCAGATATCTTGTCAA
AAAACAAAGACAGAATCACCCAAGGTGTGGTAAGTTGCAAGAAATTTCAC
AATGCACAAAACGTATGTTTTATTTGTTGTTTTTGTTGTTTCAATTATCC
TCAACAATAGGTAACGTTATAATTTTTTTGCAGGTTCACTCTTTCGATGG
CAGCAAAGAAGATGCACAGAGAATTTTAGATCTAGGACTTTACATTGGAA
TAAATGGCTGGTGAGAATCTGTTACTGTTAGTACACTAGTCTTTATATAA
AAAAATCTCTTTTTGCTAATCTCCAAGCAGATCTAATGGTTGCGAAGACC
ATATCCAACTGGCAGAAGAAGTTTTTATTGCAATAAATGTCTTCTGACAG
TTGGTTACGGTTTTCGCAACCATTGGATCTGCATGTAGATTACCTTTTTG
CAGCTTGTTCTACTACTAATTGTCAATTGATGACTGTGTACATTTCAATA
CAGTGGAGAAAAAGGCCACATAAACTTTCTTGTGTTCCTCATTTTACAGC
TCTTTGAAGACTGCAGAGAACTTAGAAACAATGTGCTCAATTCCCAGTGA
TAGACTCATGATAGAAACAGGTTTGTTTATTGCCTCCATGTACGGAGGTA
TTGTTTTTGGTATGTCTGGATGTCTTGTGTGTCCATAGTTATTTGAATAC
ACAGTTGAGTGGAAGGTAGTGAGTGGGAAGATGATATCGCAAAGGTCAGA
CTTGCGGGAGTGACAGGAAGTAGAGATCAGAGTTGGTAGAAGTACATGTA
CTATCAAACATAACTGACTTTCCTTGTCCTGGGGTCAATGGAAGAGGCTA
CTTACATGTATTCATGGGGAGGTTATTGTTTTTTGTCTTTGCAGTGATAT
ATTTCCACATGCTAGTCACGTTCACTGTAGCATGACAGAAGGTGATCATT
TTAATGTTAGTCAAAACTGTTTTTGTATTCCTAAATAATTACAATGAAAT
CAAATTTACGAGAAACTCTCAGGGGTGTTGGAGATCTTCAAACACTAGTT
TATACATGTACATGTATATACTTTAAAGAATAAATATTACACAGTAAATT
GACCTAATGTTCTGTCATCAGATGCACCATGGTGTGAGGTGAGGCCAAGC
CATGCTGGAGCCAAGCTCCTCAAGACAACTTTTCCAACAAAGAAGAAAGA
AAAATGGGAGAAGGGGCACTGTGTCAAGAGCAGGAATGAGCCTTGTCATA
TTGTGTAAGTACCCAAAAAGTTGCTGACATTATTCTGTGTCAGAATATAT
AGAGTGAATAATGTTACGTTGCTAAGAAGGAAAAGTTTTTAGCAACAGAT
ATGAATGTCAAACAGCAACCAGGTCTCAATTGTTGTTAAATTTGAAATGT
CTTGTTGAACTATTGGAATAACCTATTAACATGAATATTACATAACACCA
AGTCTATATCCTACTACATTGTATATTAATTGAGCACAATTCACATACAT
TTGTATGACTCAGCCCTGTCCTTGGTGCTGAAAATAACTCACATGAAGAA
GTGAACATACTAGTAACTGGAATAGGATAGTCATATCTGTTGATTTTCCT
CTTGTTAGAGCACACTGATTCATCTATATGGATGACATCCTCTGGGCACC
CCAAAACTGATGGGAGTGTGTGATGGACAAAAGAAAAATTGCCAACCCCC
ACCCACGCAAAAAAAGTAATCAGAAAGTTGAACTTATGTTAAATGTGCAA
GGAATAAATTTATGACAGAATATGTATATTCAACACTAAATCTGTTAGAA
AAGAGGCATTCTCATTGCAAATATTCCTTTTCTGATATTTTTTGGCAACT
GCATTTTGCAGCTTCTTTTTACTATCTACAGTATGGTAGAAAAAACTTTT
TTGGAAGCAGACAAAACTGATGCATGAGGATGTCATCCATATAATCAACT
CACTGTTGCCACAAAGTGTAGTTGTATTTCTATAGTTGCATGACAACTTC
AAGCTGTACCAGTGTTATACAATTTTATTTATTTTTTTCAATTTTAGTCA
GATCCTGGAGGTGATGGCTGGAGCAAGGAAGGAGGATGTAACAGAGTTAG
CAGATGTTCTTTACCACAACACCAAGGCAGTCTTCTTCCCTGACAAATAA
CTGTAACAGTAACAGAACTGGAAAGTATTCAAAGAGACCTATCCCATAGC
CCTGTCCACCTCCCTCAAAATGTAGAAATTCAAAATCAAAAGGTAAAATT
GTAAATATTTGATGGACATGCAGCCACTCTCTCATTGGGCAAACCACTAA
TTGGCATGCTATCATTGGTTGAACTGCTAATTTTATTACTGTGACAAACA
GCAAGGATTGGTAAAGGAAAACTTGACCAGACATAATTTGGTTGGGGGTG
TACTTTATTGTTTGCAGCGTATTGTTACAGACCAGCACATGATTGCGATA
TTGTTACTTTGCAAATTTTTGTCTAAGATCAATCACTTCAATGCCAAAAT
TGTATGTCAGTTGTCAGTCTCTGTCTTCTCCTTCACAACAATCAATATAC
ATGTATATTACCTGTAGTATTATGTGTTCTTCACACAGTGTAAAGCCAGT
TTTGGTGGGTTCTATTTTACAACTCATCCATGACATACAGAGGTTGTACC
ATGTGACATCCTAAAGCACCACTAACATAACCTTCTATGATTATTCTACA
AACATGTCTTTTTATCAGATAAATGGTTGTCCTTTAAACTGTTCAGGACA
AAGGAAACAATTTATTTACAACTGTGTAAATTGTGATTACTGTCCTCATT
GTAACTCAACATGTGAACATGAGAGCAAGTTGTTAAAGGGAATGATTGCA
TGGTTTTCAGAAGTTTAGAAAATACATTTTTGTAACTTAGAAGACCTGGG
GGAATGCTATATTTTTTTAATGTATGTCAGGCTGTGATGTTTTGAAAATT
GCAGCACACATGCACTGCCCAGAATAAATTACATGTGGTCTTGTC Coding sequence (CDS) from alignment at Sc0000158:379062..385656- >Blg01237.3 ID=Blg01237.3|Name=Blg01237.3|organism=Branchiostoma lanceolatum|type=CDS|length=852bp|location=Sequence derived from alignment at Sc0000158:379062..385656- (Branchiostoma lanceolatum)
ATGTTCAGAGGACTGTACCATGGTTCACAGAAGCATCAGGATGACTTACA
AGATGTACTTGAACGTGCCTTCGACAATGGAGTTGAAAAGATCATGGTGA
CTGGTGGAAGCCTTCAGGACAGTACCGAGGCTCTCGAACTTGCAAAAACA
AATGATGCCCTATATAGTACCGTCGGGTGCCATCCCACCAGATGTGGAGA
ATTTGAAGAGTCTGACCCTGAATCCTATCTGGAGAAGCTTACAGAACTCG
TAGAGACCAACAGGAGCAAGGTGGTGGCAGTGGGGGAGTTTGGACTAGAC
TATGACAGGCTCAACTTTTGTGCAAAGGAAACACAATTAAGGTATTTTGA
GAAACAACTGGGCATTGTGGAAAGAACCAGGCTCCCAATGTTTCTACACT
GTAGGAATGCTGCCTCTGATCTTGTTGATATCTTGTCAAAAAACAAAGAC
AGAATCACCCAAGGTGTGGTTCACTCTTTCGATGGCAGCAAAGAAGATGC
ACAGAGAATTTTAGATCTAGGACTTTACATTGGAATAAATGGCTGCTCTT
TGAAGACTGCAGAGAACTTAGAAACAATGTGCTCAATTCCCAGTGATAGA
CTCATGATAGAAACAGATGCACCATGGTGTGAGGTGAGGCCAAGCCATGC
TGGAGCCAAGCTCCTCAAGACAACTTTTCCAACAAAGAAGAAAGAAAAAT
GGGAGAAGGGGCACTGTGTCAAGAGCAGGAATGAGCCTTGTCATATTGTT
CAGATCCTGGAGGTGATGGCTGGAGCAAGGAAGGAGGATGTAACAGAGTT
AGCAGATGTTCTTTACCACAACACCAAGGCAGTCTTCTTCCCTGACAAAT
AA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01237.3-exon-Sc0000158-1570713199:385346..385656 | Blg01237.3-exon-Sc0000158-1570713199:385346..385656 | Branchiostoma lanceolatum | exon |
| Blg01237.3-exon-Sc0000158-1570713199:384997..385041 | Blg01237.3-exon-Sc0000158-1570713199:384997..385041 | Branchiostoma lanceolatum | exon |
| Blg01237.3-exon-Sc0000158-1570713199:384142..384191 | Blg01237.3-exon-Sc0000158-1570713199:384142..384191 | Branchiostoma lanceolatum | exon |
| Blg01237.3-exon-Sc0000158-1570713199:383914..383977 | Blg01237.3-exon-Sc0000158-1570713199:383914..383977 | Branchiostoma lanceolatum | exon |
| Blg01237.3-exon-Sc0000158-1570713199:383177..383320 | Blg01237.3-exon-Sc0000158-1570713199:383177..383320 | Branchiostoma lanceolatum | exon |
| Blg01237.3-exon-Sc0000158-1570713199:382693..382735 | Blg01237.3-exon-Sc0000158-1570713199:382693..382735 | Branchiostoma lanceolatum | exon |
| Blg01237.3-exon-Sc0000158-1570713199:382439..382524 | Blg01237.3-exon-Sc0000158-1570713199:382439..382524 | Branchiostoma lanceolatum | exon |
| Blg01237.3-exon-Sc0000158-1570713199:381978..382018 | Blg01237.3-exon-Sc0000158-1570713199:381978..382018 | Branchiostoma lanceolatum | exon |
| Blg01237.3-exon-Sc0000158-1570713199:381797..381873 | Blg01237.3-exon-Sc0000158-1570713199:381797..381873 | Branchiostoma lanceolatum | exon |
| Blg01237.3-exon-Sc0000158-1570713199:381437..381507 | Blg01237.3-exon-Sc0000158-1570713199:381437..381507 | Branchiostoma lanceolatum | exon |
| Blg01237.3-exon-Sc0000158-1570713199:380803..380935 | Blg01237.3-exon-Sc0000158-1570713199:380803..380935 | Branchiostoma lanceolatum | exon |
| Blg01237.3-exon-Sc0000158-1570713199:379062..380009 | Blg01237.3-exon-Sc0000158-1570713199:379062..380009 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000158 | genome | Sc0000158:379062..385656 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01237 |
|
