Blg01242.0 (mRNA) - B. lanceolatum

Overview
NameBlg01242.0
Unique NameBlg01242.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000378:2233..3693-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01242.0 ID=Blg01242.0|Name=Blg01242.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1461bp|location=Sequence derived from alignment at Sc0000378:2233..3693- (Branchiostoma lanceolatum)
ATGTTTAGGGAGATCCTGAGTTACATCTACTCAGGAACCCTCCATGTGTC CCTGGACAAAGTACAGCCCCTGTACCAGGCAGCCGACCTCCTCCAACTGG ACTATGTTAGAGACACCTGCACCAGCTACATGGTGGAAAACGTGAAAGTG GAGAGCTCTAACTGTGTGGACCTGTACAAGTTCGCCGATGTCTTCTCTGT GGACACTGTCCTCAATCGTTGTCAGCAATGGATCATTGGGCACTTTACTG AGGTCCGTCTTCATAATGGCTCTGTCTCTTGTCCATAAGAGCAGTATCGT ATTATATTTAAAGTGTTGAAATTGTAGTGCACAAATGTTCTGAAGGTGAT GAGATTACTGCTGACATGCCACATGCTTTTATATATAGCAGGTGTAGTAC ACCAAAGGGTGGATACACTGACTTAACAGATACATCTGCTTGTCATTTTT GATCAGCTGGATAGAGCCGCATGGAAGGGCAGTATGAAGATTAGCCAACT GATACCCACCCCTGTGTCTGGAACCCAGTTGCAGTATAATCAAATACTGG ATACTATACTACATGTACACATAAAGCTTCTTGTATTTCAGTCAAACATT ATTGCAACTTGCCTTGTTAGATATACATGTACCCTGTTCATTCGCAGGTT ACCTCCATTTTTGCAACATGGAACATTTACATTTACTCTGTAACTCCACA GGTTGCCTCCAGCGAGGAGTTCTGCAGCCTTATTGTGAATCAGCTGACTC AGATCATCAGCTATGATGAGCTGGATGTAAAAGAGGAGACAACAGTGTGG GAGGCTGTGGTGAGATGGGTGCAGCACAGCAGGGAGGACAGGTAGGTATT AGTGTTTTGTTGTTTCAGCTGAGTTGTCATATTGTAGTCGGTACTTGAAC TAAGTATGATGTATTAAGAAGCTGCTGTGTTGCCAAGAAGTCAGCTGAAT CCACCTTTACCCTGTACCCTAAGACAGCACCACCTACCCAGCATCCTCCC TCACATCCGCTTCAACCTCCTGACCTCAGACGACACGGCAGCCATCTTGC AACACCCACTGGTCAGGGAGGATCCTGGGAGTTCTGTCATCAGAAATGTG ATAAAGGAGACTGCCAATGTTAACAAGAAGAGGAGGGTTGGAATGGACTC ACTGGAAATGGCTCTGCTTTTTTCCACAAGGTGTGGGTCACATTCATTTA ATCACCGTGTCAGTAATAACAATCAGTGTCAGTATTACGTATATGTCCCT TATATGAACAACGATACATGAAACCTTACTGTCACTCCCGAAAATTGCTA CCTACCTCACCTACCTAGTCCCTTGACCTCCGGGTCGTTGGGGGGGGGGG GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGCAAGGTAGCATTGAAGATGGACAT CTGTCTCCAGG

Coding sequence (CDS) from alignment at Sc0000378:2233..3693-

>Blg01242.0 ID=Blg01242.0|Name=Blg01242.0|organism=Branchiostoma lanceolatum|type=CDS|length=636bp|location=Sequence derived from alignment at Sc0000378:2233..3693- (Branchiostoma lanceolatum)
ATGTTTAGGGAGATCCTGAGTTACATCTACTCAGGAACCCTCCATGTGTC
CCTGGACAAAGTACAGCCCCTGTACCAGGCAGCCGACCTCCTCCAACTGG
ACTATGTTAGAGACACCTGCACCAGCTACATGGTGGAAAACGTGAAAGTG
GAGAGCTCTAACTGTGTGGACCTGTACAAGTTCGCCGATGTCTTCTCTGT
TGCCTCCAGCGAGGAGTTCTGCAGCCTTATTGTGAATCAGCTGACTCAGA
TCATCAGCTATGATGAGCTGGATGTAAAAGAGGAGACAACAGTGTGGGAG
GCTGTGGTGAGATGGGTGCAGCACAGCAGGGAGGACAGACAGCACCACCT
ACCCAGCATCCTCCCTCACATCCGCTTCAACCTCCTGACCTCAGACGACA
CGGCAGCCATCTTGCAACACCCACTGGTCAGGGAGGATCCTGGGAGTTCT
GTCATCAGAAATGTGATAAAGGAGACTGCCAATGTTAACAAGAAGAGGAG
GGTTGGAATGGACTCACTGGAAATGGCTCTGCTTTTTTCCACAAGGTGTG
GGTCACATTCATTTAATCACCGTGTCAGTAATAACAATCAGTGTCAGTAT
TACGTATATGTCCCTTATATGAACAACGATACATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01242.0Blg01242.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01242.0-exon-Sc0000378-1570713199:3496..3693Blg01242.0-exon-Sc0000378-1570713199:3496..3693Branchiostoma lanceolatumexon
Blg01242.0-exon-Sc0000378-1570713199:2853..2992Blg01242.0-exon-Sc0000378-1570713199:2853..2992Branchiostoma lanceolatumexon
Blg01242.0-exon-Sc0000378-1570713199:2414..2720Blg01242.0-exon-Sc0000378-1570713199:2414..2720Branchiostoma lanceolatumexon
Blg01242.0-exon-Sc0000378-1570713199:2233..2263Blg01242.0-exon-Sc0000378-1570713199:2233..2263Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000378genomeSc0000378:2233..3693 -
Properties
Property NameValue
GeneIDBlg01242