Blg01335.0 (mRNA) - B. lanceolatum

Overview
NameBlg01335.0
Unique NameBlg01335.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000051:1376755..1379167+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01335.0 ID=Blg01335.0|Name=Blg01335.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2413bp|location=Sequence derived from alignment at Sc0000051:1376755..1379167+ (Branchiostoma lanceolatum)
CGAGGACGGTAACCGCTACCGTGCGCTCCTGCTAAAATGAGCTAAATTGT GTCTTAACCGTACGATCCGTACAATATTTTACAGTCTACTAGTTTGTAGA CTTAATCTTTTCTATCTGAATTGTATTTTTGGTTATTTGGGGGAATTCCC CTCGAAATACGACAACTTTTGGCACTTCGGCAAAACCCAAGCCGGACCCA AGCTGGACATGGCTGACAAAGGTGACCGCGAGGAGCTGTACTCCCTACTT GGACTACCATCTACAGCAACCCACGCTGAAGTCGTCGAAGCCTACAAGAG AGAGATTGTGCTGTATGAGGAGGCGTCAAAGTTAAGCAAAAAAAGCAGCG TCTACAAGGAAGCTTACTCAAGACATCGAGAGGTAAGCAAGGCGTTCTTT GTCCTCTCTGACGCGTCCAACAGTCAAGAATACAATGACAGCGGCGTCAC CCACAACTCGCCAAAACGTGCCAAGAAATCACGAAGACAACGTAGAGACT ATTGCGTGAAACATAACGCACAAAGTATAACCGTTTTGCTACCTCAAAAC CTTACGAAGTCGGCCGCGAAGTCTTGGCTTACTACCTGCGAAGATTATTA CGACACTAAGGCAACCGACGGAGGGACGAACGGTCTCCAGATCAACACAA CGTATAGCGATGCCACCTCTAATATACCAGCCGGAACCGTGACCATCAAG GTGTACGAATCTGGCCAGAAACTGTTGATTCAGGGTTCAGCTTATTTGTT ATGGTTCTCAGAGATGTTCCCTGTACTGAGAAAGAAAGTCGACTCCACAT CTGTACACGCCGAAGTTCCAGCCGATAACTCGAGATCGAACTCAGATGAC TTCGCGAAGTCTGTGACCGAGGTCAATCCATCGCTTTGCCAATCGTGTGA TCAGCCACTATCATCGGATGTTTGCCCCCTGTGTAATACGGTACCTAAGG ATCTTAGGGACGTCAACAGTAACGCCGTAGATTTTCCAGAAAGTGAACCC CAGAAAGACATTCCCGTTAATCACGACTATGTACAAGTTCAAGACAACAT CAACAAGTTAGAAACTTGTTTGATTGAATCAATCGCAGACAGGAAACTGT TTGAAGATTCAATCTCGCAGCGCATGTCTGCTCTTGAATCTAAACAGAAC TCTTGTCAACGTGTATGTGACAGTATATCTGTTGCAGAGGTAAGAAAGCT AAAGGAGGACATTGTGCGTTTAGAAGGTGTTAAGTGCGAACTGGAACACC AAGTCAGGTCGCTGAAGGAAAGCCTTGCAGAGTTAGCTGCTGTTGTCTGT AATGCCCCAGTGAAAATATCAACGGAAACGCAAACCGCAAATGAACAATC CGTGGATCAAGATTCACATCGTGCCGACAAGTTGATTCAAGAAATCGTTT CAGTGAATGTCCAGAATCGTTTCGAGGTCCTGGGCGATATCTCTGATCGC CCCGACACCGACATTTCACACATGGGGTCAAAACACGGCACACGGGGAAC TGCTGATTCAAAACCAAATCAGTCTACGCGCTCTGCCCGCCGTGAAAAGA CCGCGCCAGACGAGACAACCAAGACCAATCAACAGAACAAAGACCCGCTG CCGGACATTCTGATCCTCGGGGACTCCAACACAAAAGCACTCAAACCAGA CATTCTATACCCCAACAAATGCGTGAAAAAGGACCTTACATTCAATCTGA CAGAAGCCACCCAGTACATCCAACACTCAGAGTTGACCGACCCGGCGGTG ATTTTGTTTCATGTCGGAACAAATGACGTTCGCCGTACACCGGACGCGGG GACGGTGACCGAAGGCTTCCGCAACCTCATCCAAACTGCCCATGATAAAT ATCCCCGCTCCAACCTTGTCTTGTCTTCTATCCTACCAAGGGATGACCCC ACTTTACAAGACATCGGGGATGACGTCAACACATTTCTGAAAGTAGCTGC CAATGAAACCAGCTACGTACACATTATAGACAACGCAAACTTTGTAGACT CCGGGACAATCAAAAGTGCGCTCTATACATCTGACGGTTACCATGTCAAT AGATCCGGTATACGTGTTCTGGCCGCCAACATCAAGAGAGCAGTCAACCC ACTCTTGGGCCTGGGTCAGTACACGGCTAGGAGGAACCAACCTGCGGCGA TTACAATATCTCAGAACCGATCATACAGAGACGCTTTGATCGGTTCTTCA GATGGTGCCACACCTACTCTGAACAATCAGGCACAGCCTTCACATTCACT CAGGCCCGTCCACAACTCAACATCAGGACACGACCGAAGACCTGTGTCCA CACCTTCCCCAAAGTCTGTNACCCACTGTTGGGCCTGGGTCAGTACACGG CTAGGAGGAACCAACCTGCGGCGATTACAATATCTCAGAACCGATCATAC AGAGACGCTTTGA

Coding sequence (CDS) from alignment at Sc0000051:1376755..1379167+

>Blg01335.0 ID=Blg01335.0|Name=Blg01335.0|organism=Branchiostoma lanceolatum|type=CDS|length=2205bp|location=Sequence derived from alignment at Sc0000051:1376755..1379167+ (Branchiostoma lanceolatum)
ATGGCTGACAAAGGTGACCGCGAGGAGCTGTACTCCCTACTTGGACTACC
ATCTACAGCAACCCACGCTGAAGTCGTCGAAGCCTACAAGAGAGAGATTG
TGCTGTATGAGGAGGCGTCAAAGTTAAGCAAAAAAAGCAGCGTCTACAAG
GAAGCTTACTCAAGACATCGAGAGGTAAGCAAGGCGTTCTTTGTCCTCTC
TGACGCGTCCAACAGTCAAGAATACAATGACAGCGGCGTCACCCACAACT
CGCCAAAACGTGCCAAGAAATCACGAAGACAACGTAGAGACTATTGCGTG
AAACATAACGCACAAAGTATAACCGTTTTGCTACCTCAAAACCTTACGAA
GTCGGCCGCGAAGTCTTGGCTTACTACCTGCGAAGATTATTACGACACTA
AGGCAACCGACGGAGGGACGAACGGTCTCCAGATCAACACAACGTATAGC
GATGCCACCTCTAATATACCAGCCGGAACCGTGACCATCAAGGTGTACGA
ATCTGGCCAGAAACTGTTGATTCAGGGTTCAGCTTATTTGTTATGGTTCT
CAGAGATGTTCCCTGTACTGAGAAAGAAAGTCGACTCCACATCTGTACAC
GCCGAAGTTCCAGCCGATAACTCGAGATCGAACTCAGATGACTTCGCGAA
GTCTGTGACCGAGGTCAATCCATCGCTTTGCCAATCGTGTGATCAGCCAC
TATCATCGGATGTTTGCCCCCTGTGTAATACGGTACCTAAGGATCTTAGG
GACGTCAACAGTAACGCCGTAGATTTTCCAGAAAGTGAACCCCAGAAAGA
CATTCCCGTTAATCACGACTATGTACAAGTTCAAGACAACATCAACAAGT
TAGAAACTTGTTTGATTGAATCAATCGCAGACAGGAAACTGTTTGAAGAT
TCAATCTCGCAGCGCATGTCTGCTCTTGAATCTAAACAGAACTCTTGTCA
ACGTGTATGTGACAGTATATCTGTTGCAGAGGTAAGAAAGCTAAAGGAGG
ACATTGTGCGTTTAGAAGGTGTTAAGTGCGAACTGGAACACCAAGTCAGG
TCGCTGAAGGAAAGCCTTGCAGAGTTAGCTGCTGTTGTCTGTAATGCCCC
AGTGAAAATATCAACGGAAACGCAAACCGCAAATGAACAATCCGTGGATC
AAGATTCACATCGTGCCGACAAGTTGATTCAAGAAATCGTTTCAGTGAAT
GTCCAGAATCGTTTCGAGGTCCTGGGCGATATCTCTGATCGCCCCGACAC
CGACATTTCACACATGGGGTCAAAACACGGCACACGGGGAACTGCTGATT
CAAAACCAAATCAGTCTACGCGCTCTGCCCGCCGTGAAAAGACCGCGCCA
GACGAGACAACCAAGACCAATCAACAGAACAAAGACCCGCTGCCGGACAT
TCTGATCCTCGGGGACTCCAACACAAAAGCACTCAAACCAGACATTCTAT
ACCCCAACAAATGCGTGAAAAAGGACCTTACATTCAATCTGACAGAAGCC
ACCCAGTACATCCAACACTCAGAGTTGACCGACCCGGCGGTGATTTTGTT
TCATGTCGGAACAAATGACGTTCGCCGTACACCGGACGCGGGGACGGTGA
CCGAAGGCTTCCGCAACCTCATCCAAACTGCCCATGATAAATATCCCCGC
TCCAACCTTGTCTTGTCTTCTATCCTACCAAGGGATGACCCCACTTTACA
AGACATCGGGGATGACGTCAACACATTTCTGAAAGTAGCTGCCAATGAAA
CCAGCTACGTACACATTATAGACAACGCAAACTTTGTAGACTCCGGGACA
ATCAAAAGTGCGCTCTATACATCTGACGGTTACCATGTCAATAGATCCGG
TATACGTGTTCTGGCCGCCAACATCAAGAGAGCAGTCAACCCACTCTTGG
GCCTGGGTCAGTACACGGCTAGGAGGAACCAACCTGCGGCGATTACAATA
TCTCAGAACCGATCATACAGAGACGCTTTGATCGGTTCTTCAGATGGTGC
CACACCTACTCTGAACAATCAGGCACAGCCTTCACATTCACTCAGGCCCG
TCCACAACTCAACATCAGGACACGACCGAAGACCTGTGTCCACACCTTCC
CCAAAGTCTGTNACCCACTGTTGGGCCTGGGTCAGTACACGGCTAGGAGG
AACCAACCTGCGGCGATTACAATATCTCAGAACCGATCATACAGAGACGC
TTTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01335.0-exon-Sc0000051-1570713199:1376755..1379167Blg01335.0-exon-Sc0000051-1570713199:1376755..1379167Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01335.0Blg01335.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000051genomeSc0000051:1376755..1379167 +
Properties
Property NameValue
GeneIDBlg01335