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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000051:985623..993814+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01342.2 ID=Blg01342.2|Name=Blg01342.2|organism=Branchiostoma lanceolatum|type=mRNA|length=8192bp|location=Sequence derived from alignment at Sc0000051:985623..993814+ (Branchiostoma lanceolatum)
CTGGGGGACGTTGGTTTGGGGATCTGTTTGGACGTATCTTTTCAGGGTGG
CGGAATTATGTACCCTGTCAGAATTATGTTACTCGTTTCTAATCAGAGCA
GAAACGAGGAGGTCGGGAAAATCCTTTGGAAAGCAAAGCGATGGGTTCAT
GAGCAATTTCAGACGAAAAGATCGGAGAAGTCAATCGAAAGGGATAGGTG
TGCAAAATGTTCCTTCCCATTCTAGAGATATCTTCTGATATTTTTGATGA
AACGGGATGACCACGCATACCAGTTGCTTCTGTGTATCGATACAAGCCAA
TCCGTACACGTATCGCGTGCATTCCTAATGCTCAACAGGAGTTGCACAAT
TGCCCCAGATCAATGAAAACACGTTTCTTTGTTAGATCTGTCATTTTAAG
CTAACAAAAACATATTTCCTTCAATGTCATGTCATGAAGTTAAGATTTTT
TTGGACAGACGGGGCACCATCACAACAAACAAAACAAACAAACAAACAAA
CAAGCAACAAGAAGGGACGGGTCCCGGAAACAGCCCTTCATCGTTCATAA
ATACATGGCTTCATCTCTCTTCTGTACCTTCCCATTTCCCACGTTAAATA
TATCCGTGTGACAGCTAATAAGACTTGAAGCGTCCTGAACTATATGGCAG
CGAACCTCCATAACAGGACCATGCTCCAACCATGTACCCGAGAAAGGAAA
CATCGCATTTTTCTGTAGCGCTCTTCCGAACTGATCCGAGTGCTGGTCCG
GAGAGTAGAGTTCCGCTCTCAGGTCGGTCTCCACTAACTTCCGAGCACCG
TTTTCTTTTCACCAGAGGAGTACGCTTTCTCCCACAAGGAAGTTGTATTG
CTGCTCTAACCAGAAAGGTAAGTTTGGTTGTTTTTCTGTTGTCGGGAACT
GCTGTAGTTTTAAAAGGAGGAAAAAAATCGCTACCACGGGTGACCCAACA
AGGTCATTACCCCCCTCCCCCATTAATTGTCTTTAGGACGTAATTTCTAA
CTTTAACTGTTGACAGGCTTTCAAGCTGTGTTTTTTCTGTCTTGATGTAA
ACGAAAGGAAATGAAATGTAACGTACTGCTAAACCAATGAAGTCGTCTAT
AACATAGATTTTGAAGGAAGCGGTCGCCATAACTGACTATCCGAGGCAAG
ACAGAAAAGAACACAAGCAAAAAGTGTACACCATTTGAAGACAGGTTGCG
TTTTTTTATCATCACTGGTGAGAGAGCGAAAGACTTGAATACGTCGGGCC
AATAGAAAATAGTTTTTGCTGAAAAAATTAAAAGCAGCTCGTTTTCTTCT
GAGCCTGACATTCGTTGTTTTGTTTTTTCAGTCAACTTCTAACAGCCATG
AGCGATCAGGAGGAGGAGTAAGTACAACTTATGATTTTTGATATATATCC
TTGTGTGTGAAGATGCGCACTGGCGTGCCGGGATGCGACGCAAACCAAAA
TGGAAAAGAAAAATGTAATCCTAGCGATCTGTTGCTGAACTGCAATATTA
TGGTCAATTCACATCGTGGCCTGTAAGTCTCCTATGAGTCCATATACGTT
TATGGAGCAGTGACTGTCGCTAGCAAGTAAATAATGGATGCGTGTTTTAA
AAGGATAACCAGGGGGAAGCTACGACGCCATAAGGCTAAATCTAGATTCA
GGCCAAAGTAACATCGTAGATGCAGGCGACCACTATGTTGTAAATTTCCA
TATTCTTGTGTTTTATTTTTATATTTATCGATGTACCTCCGCCTCTTTTC
ATGATATATTATCTTTATCGGGAACTAAATGTTGATTGCAATAGATAATC
TACGAAGTTACTGATTTTATGAGACGCCAAGAGGCGTGGGCATGTACACG
CATGTACCCAGGAGCCTCTTCATCAAACAATTCATCAGAAAAGTGTGGGT
GAACCTTCGTCCTCCCAGAATCGCCCTTTGCCAATTCGCACCACCAGTTG
GTTCTAAGGAAAGTTAGGACCTTGTACCTGTACTCATACTTTCTAATTTT
TCACACCTGTGCAGGTACGAAGGTGAGGAGGAGGTTGAGGAGGAGGAGGA
AGAGGCTGCTGAGGAAGAGGCGGAACCGGAACCGGAACCCGAAGCTGAAC
CGGAACCGGAGCCCGAGCCTGAACCAGAACCCGAGCCGGAACCGGAGCAG
GCCAAACCCAAGCCTAAGTTCATACCATCGTAAGTATTCTTCTTCTTCTG
GTGACGTTGGGAGATCTAGAGTTATGGTATTCTCCAAGCAAAGGCTTCGG
TCGAGAGGGATAGAAGTGGTCGCCATTTTTAACGTTTCTGATGGAATCGC
GGCCACTCCTAGCCCTCTCGACCGAAACCTCTGCTTGGAGAATAGAGAAA
TGTCTTCTGACATCCCCGCTGGCCCTCTTCTTCCCAAGCATGTCCAAAAT
AGTTTTGAATCTACTATTGTTGATAAAGCCCATCTTAATTTTGGTTGATG
TCCATTTAGTGCTGTCCTCCCGAAGAAGAACCCTTGCATCCTCACGTCTG
TTGATCTCAACCGTAAGACACTGCACTGGCCATGGGTTGTTCTGGTGCTC
TTTCCTGATGCAGCTATCCTACTCATTTGTCTAAAAGGCACATGTATTGC
AGTATTTCACCTTAGAGGTTCGACATGTACCACCGACGATTGCATACCTA
TATTAAAATACAGGCTTATAAGAAGCAACCTCGTTTTGGTCCGCCGATCC
ATGACTGCGAGCTGACCCCGGGAAATTCAAAATGGCGGCCGTAATTGGCA
AGAGGTCTACCTCTAAGTTCCATAAAATGAGCTCATGGAAAATTTTGGAC
ACTACAAAAACATTGTTTCTTTTGATTCTAGGACCTACGAGCAGCCTAAG
TATGAAGGAGACGAAGACGTCGAAGCCAGGCTTGGGGTATGTCACGTTGA
GATTTTTTTCGTTGACCTAGTGAAGAGACCTAGCTCATGTAGGGTTAGGA
ACGTCCCTCGGATAGGACGTGTTTGGGGAGAGCCACACCCCGCGCACGTA
AAAAGAACCCACCACAACTTTCGAAAAAGAGTAGGGGCATGCCCCGGTGT
GCGATGGTCCGAAACCTACAGTCCCATGGCCACACATGGGTTCGCCCTTA
GTACTAGCCTCCGGCTAGTTGGGTAAACCTGGCATGTACATGCTGAACCA
ATAAATGAAATAAATAAAAGAGACTTGTTGACAGATAGACTAGAGAATTT
ACTTTGATGTTCATTTGCAATGTTTGCGTGACCATAACGGTCGTTCAATG
AAGTTTCATATGGAGAAGGCGACTATTTATAGCGCATTGTGGTAGTTTTT
GCTCTCTGTCTAAAGTAGTGGTTTGTGTTAAGATTTTAGGATATCATCCC
TAAGATGTGATGTTCACTCTATTCTTTATTCTTTAGACTAAGCTTAGTGC
CGAAATTAATCATAAGGCTTTGGCATATAGAGTAAATCTATAGTATCTAA
AGCACGTACGTGCAGTAAAACTAATATTTAACTCCATGTGTCGACCGGAA
TCTACGTTGATGTGCTCTGAACGTTTTATCAGCCGAGAAACAAAACACAG
TCGTGCACATAAGCCTAGGTGTCATCCGAATACTACCGGGGCTCCTACAC
TCACTACCCTGATTTTTTCAGGGTATCGAGTGTAGGATCCCCGGTAGTAA
TCAGATGGCACATAGGCTAGTGCACAGGGCCGGTCTCAGATATCCATGCG
CTATCCAAAGCACTTTGGGTTTATCATAACTGGGCATAAACATGATTAAT
CGCCGCTATTTTGATAAGTGGTGCCATTAAGAAGTACGTGGGATTTCCCT
GCTACAGCAAATGGCCGACAAAAGGCGTCAGAAGGACCACCTGGAGTTAG
AAGATTTCATCAAGAAACACTTCGACAAGCGAGAAAAGGAGGAAGAAGAA
CTACGGCTGCTCATCGTGCGAAGGGTGAGGAAACATCTTTCATTGCTTTC
TTCAATAATTTCATACATCTTGATTGAAATTCTTCATTAACGGGCTTCTT
TTGTTCCGAGAGGAATACAGTAACAACACCTGTTGGTAATATCATAAGGT
GCATATTAAGTGTTGAATAAAATGGAGAAAACGAGCTTCATCCAGATACC
TTTACATGATTATGTCTTCAAATTATCATGGAAGTTTATCTGTGTTGGAA
GTAATCAGAGTACAATGCTAAAACTATAATTCTTCCGACTCAAAGGTATA
CACGGATCAATTTTTCAAATTTCTTTCGGAGGTCCTCCCGTTACTTTTCC
TAGGTGCTTACTGGTTCGCCGCCTGCTCCTACTCCGCGACCACAGAATGA
ATGTCTTATTTTTTATGTTAATTATGGATATCTTACCCTCTCCCGCGCGG
TGTGAGCTTGGATAGTATCAAATCCCTCCTCACTTCGCTCTCTGTTCGGG
TTAAGATATGGGTGTTATGTCGGGGCCTCCATCTTTTCTTCCCCTTCCAC
CCTTTCTCCCCCTTATCTGATGCTTTTCTTTTTCCCTATCGTCCAATACT
TACAAAACCCTACCCCAGTCTTTTGGTTTTCCTCGCCTCTCTTTCCATAG
AAATTTTCAACGACCACTGTAGCCTTCTTCAGGATCGATAATGACCGATC
ACTTCGAATGTAAACTCTCGAATTATTGACACGTGCCTTTGCGGATGCGT
GACGCCCACCGTTTCTGTTGACTGATGGCTGGAGTACCCTGATGTATATT
GCCTTCTCTATACCTCTCATAAAGAAGTCCTGTAGAGTGTCCAGTATTCT
GACTTTGTCTAGTGAAACAGTATTGACCGGTGAGTCAATGTGGATGTGTT
TTTGGGGATTTCCGACGACAGCGAGCTAGAGCGTGTTGTAATAAGATTGA
AAGACAGTGACTCGTATTTTCCATCACTGCCAAACATCTTGACCTTGATA
AACCTGTTGTCACCTTCCATGCTAGGAGAAACGCAAAGCGGAGATGGCGG
ACAAAGAAGCGGCCCGCAAGGATAGAGAGCGGGAGAGAGTGGCTGAGGAG
AAGGTAGAAAAACTCTGATCTTCCTGTTCATAAGTCGATGTAAAGTGTTA
CAGAAATCTAATTGTGTAAAACACCAGAAACAATCATCCAAGAAACACAT
TTCTTATGAAGAAATGAATTCTATTCCAGGCTCGCTTGATGAAGCAGCGT
GAGGAAGAAGAGCGCAAGCGCAAAGAGGAGGACGACAGGAAGAAGAAGCT
GGCCAACGTGAACCTGCACATAGGCGGCTACCTGTCCCGGGTAAGCACCT
GTCACTGCGCATGCGCAGAATTGTGGTTAATATGTCAAAGAATTTGTCAA
ATAAGTTATCGCGTGTTATAAGTATTGGATTGCCTCCACGAGAGAGACGG
AAAAATGTACTTTCTCTGCAACAAGAAGACAAGCAAGACAACCTGGAGCT
AACAACTGCATGGGGATCAGTGAAATAATGTATTATCTATTATTGGGTGG
GCAGACTACTCTTTCTTCGCAGCCAGGGGCTGAATTGCGAGGAGCCTTTC
GGGCGGGCCAGATCACAAGGGTTTGGAGCGGTTGCCATTCGGCGCTAACT
CAGGTGACCTCAACACGACAGTTGCCTCATAACACGGCAGAGCACACAAT
ACACTCCTGTTGTTTCAAGCTTTGCAAAACGTTTAACGCTGTCGCCCGCC
GTGTTCTTCTTTCACCTCCTCAGTTGGAGGGGAAGGAGAAGGGTCCCAGC
AAGCGGCAGCTGGCGCAGGAGGCAAAGCGGAAGAAGATCCTGGCCCGAGT
CAAGGCCCTGCCGGACCTCGGCTCCATGTCCGACCACGAGCTGCGCGAGA
AGGCGCAGGAGCTGCAGGACAGGCTCAAGTTCTCCGAGGAAGAGCTGTAC
GACATGAAGGACAAAGTGCAGCGACAGGTTCACGACGTAAGTACGACAAG
CATAGTAGTAGTAGTAGTAATAGTCCACCGTGTTCTGCTGTTGCAGTAGC
TCTGAGCACATTGCAGCTGCAATCAGTCTTTCTTCAATTCTCTACACTTC
ATCCGGTTCATCGCACGCGCAAGCTTCCTTACCTCCCGTAGCTTTCTTTC
TGACCGCAATGGTCTTAGACCTCTTTTCTGAAGGTAGGTCTGCCCTCAGT
AGACTCAGTAGGCTCTTGCAGTGTCTTTCTTTTCTGGATCCGTAGGCATT
ATCATTAGATCCTATCACTGCGAAGTCCAAAGTCTGTTGTGTATACATAG
GTGAGTCGGTTGCGGTCGGCATTTACGACAAGTATTGGGATCGATGAATG
AATGGATGAATGATTGTTTTTAATTGTGCATTTTGAGCCTTGTTCCAACA
CAAAGAAAATAAACACTGAACATTTTTCAGTCGATCTCGACAACCTTCAT
CAGATGTCTGATTATAATTCACTGCGCTTACTGTTGGGAAAACAGAAACG
TGATGACGTCAGGAGTGAATCAAAGGTGGCAGGAAGACGGAATCTACCAC
CGCCACGGCTCACTCATAGATAGTCTGTTTTGTTTTGTTTGAAATATCAG
ACTCGTACAGACTGTTACCACTGCTGTTCTTGGTTTCTTTTAAAGTTCAA
GTGTTCATTTGTGGCATTTACCTTCTTCAGATGGACCGTTTGAGGACTAC
CATAAACGAAGCCATGGGCAAATTGTAAGTATTGTTGCGGTAGATTTGCT
AGTACATGTTTTATCTATAAACCATATTCTCATAATGAGATTGCACTGTA
CTTGGGTCGAACTACCGGGTCGCGCTGATAGTGATACCCCAGTAACGAGG
CTGGTTGGCTGGTTTCGAAACTTGATCAATGGCCGGCGCCATCTCGTCAA
CAACAAAAGTGTGTACCTATGAAACTATTAGAAGAAACGCACCCTTTCGA
CTAGACGGCAATAGATGAGCAACAGTAGACGAACAACTTGATTGGATCTG
TGTGACCCTTGGTTTCGTGACTGGAATATGATGCACGATGTAAAAGTATG
ATGTGAAAAACAACACACACTGTAAGAAAGATCCCATCTTTGTCCATGAA
AATTAATTGAGTACATGCCAAATCTTTGGTCGCTCAGTGTTCGCAGCCTC
TACAGGGGGTGTAAGTAGTAGGTGTATCTGTAATGTTGTTACAACGTGCT
GATTCCCTGCATCTTTTCCACAGCAACAAGCCGGGCTCAGCCGGAGGTGC
ACAGAGAGGACGGGTATGGTAACTTCTTTGTTCTTAGATATTTGAGCTTT
GACTTTTGTTCTACTATGCTTATCATGTTATCACATTCATTGGTATATGA
TAGGATGATTGCAAGCTAGACCGTAATGTGTAGCAAGTTGAGGTAGAAGT
TCAGCACATTGTTATATCTTTGTTCTTTATCAGAGTATTGCAACACAACA
ACATAGTATGGCCCACAGGCAGTCAACAGGTTAATTCGGACTTAAAATCA
ACGCGGGACCCGGTAACAAAAAGACGCCGTGAGCTAATCTTGCAAACACC
GGCGCAATTGTGACCTCAACATTAGCTGGTGTTTGTACCACACACAATAC
AAAACATGACATACACACATGTACATCAAATCAATACCTCAGGTCTCGTT
TGGGGACACATAGCATTGAGTGATCATGAACAGCACAATTGAACTTAATG
TTATTGATGGCACTGGATAAATTGTACATTAGGTTAAACCAATAAAAGCT
CGACCCATTCCCCTAATTATGTTTGCCTTTTCTCTAACATTAGGTTGCTG
GAAAGTTCGGCAAGTAATAGTCAAAGGGACGACATGGCAGCGCCACCTAC
CGCCGCCTCACGGAACACCAGGTCCTGTCCTTCTCGCTTCTCCGTACACT
GCGGATGTACGTGGCAAGGCTTAGGTGCCACACAAGTAAAAGACGTTCGG
ACTCCTGCTTAACAAGGATATTCCACATCATTGTATCATCCGTTGAAGTT
TGAACTAGTAAAAAAAGACAGCTACAATTCTCTCGAGCAAGCTACCCTAC
CAGTGTAACAAAACTAACTTGTTTTAGAGAAGAATGTTGAAGATCACGAG
ATAGCATCTGTAATAATGGAGAAAGATTGTTCGCCTATTTAGCATCAGTA
CTATTTAACATTTCATATCAAAAGTTTTGAGAGTGTAACATTATATATGT
AGACACGTAAAGAATAATGTTAAAGTTGCTGTAGTCTGCTGGTTGTGCTG
ATATGGACTGGCTATGAATGTAAATAAAACAGTTGAAAATTT Coding sequence (CDS) from alignment at Sc0000051:985623..993814+ >Blg01342.2 ID=Blg01342.2|Name=Blg01342.2|organism=Branchiostoma lanceolatum|type=CDS|length=867bp|location=Sequence derived from alignment at Sc0000051:985623..993814+ (Branchiostoma lanceolatum)
ATGAGCGATCAGGAGGAGGAGTACGAAGGTGAGGAGGAGGTTGAGGAGGA
GGAGGAAGAGGCTGCTGAGGAAGAGGCGGAACCGGAACCGGAACCCGAAG
CTGAACCGGAACCGGAGCCCGAGCCTGAACCAGAACCCGAGCCGGAACCG
GAGCAGGCCAAACCCAAGCCTAAGTTCATACCATCGACCTACGAGCAGCC
TAAGTATGAAGGAGACGAAGACGTCGAAGCCAGGCTTGGGCAAATGGCCG
ACAAAAGGCGTCAGAAGGACCACCTGGAGTTAGAAGATTTCATCAAGAAA
CACTTCGACAAGCGAGAAAAGGAGGAAGAAGAACTACGGCTGCTCATCGT
GCGAAGGGAGAAACGCAAAGCGGAGATGGCGGACAAAGAAGCGGCCCGCA
AGGATAGAGAGCGGGAGAGAGTGGCTGAGGAGAAGGCTCGCTTGATGAAG
CAGCGTGAGGAAGAAGAGCGCAAGCGCAAAGAGGAGGACGACAGGAAGAA
GAAGCTGGCCAACGTGAACCTGCACATAGGCGGCTACCTGTCCCGGTTGG
AGGGGAAGGAGAAGGGTCCCAGCAAGCGGCAGCTGGCGCAGGAGGCAAAG
CGGAAGAAGATCCTGGCCCGAGTCAAGGCCCTGCCGGACCTCGGCTCCAT
GTCCGACCACGAGCTGCGCGAGAAGGCGCAGGAGCTGCAGGACAGGCTCA
AGTTCTCCGAGGAAGAGCTGTACGACATGAAGGACAAAGTGCAGCGACAG
GTTCACGACATGGACCGTTTGAGGACTACCATAAACGAAGCCATGGGCAA
ATTCAACAAGCCGGGCTCAGCCGGAGGTGCACAGAGAGGACGGGTTGCTG
GAAAGTTCGGCAAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01342.2-exon-Sc0000051-1570713199:985623..986989 | Blg01342.2-exon-Sc0000051-1570713199:985623..986989 | Branchiostoma lanceolatum | exon |
| Blg01342.2-exon-Sc0000051-1570713199:987637..987801 | Blg01342.2-exon-Sc0000051-1570713199:987637..987801 | Branchiostoma lanceolatum | exon |
| Blg01342.2-exon-Sc0000051-1570713199:988454..988508 | Blg01342.2-exon-Sc0000051-1570713199:988454..988508 | Branchiostoma lanceolatum | exon |
| Blg01342.2-exon-Sc0000051-1570713199:989430..989546 | Blg01342.2-exon-Sc0000051-1570713199:989430..989546 | Branchiostoma lanceolatum | exon |
| Blg01342.2-exon-Sc0000051-1570713199:990548..990625 | Blg01342.2-exon-Sc0000051-1570713199:990548..990625 | Branchiostoma lanceolatum | exon |
| Blg01342.2-exon-Sc0000051-1570713199:990752..990862 | Blg01342.2-exon-Sc0000051-1570713199:990752..990862 | Branchiostoma lanceolatum | exon |
| Blg01342.2-exon-Sc0000051-1570713199:991296..991508 | Blg01342.2-exon-Sc0000051-1570713199:991296..991508 | Branchiostoma lanceolatum | exon |
| Blg01342.2-exon-Sc0000051-1570713199:992203..992246 | Blg01342.2-exon-Sc0000051-1570713199:992203..992246 | Branchiostoma lanceolatum | exon |
| Blg01342.2-exon-Sc0000051-1570713199:992746..992785 | Blg01342.2-exon-Sc0000051-1570713199:992746..992785 | Branchiostoma lanceolatum | exon |
| Blg01342.2-exon-Sc0000051-1570713199:993316..993814 | Blg01342.2-exon-Sc0000051-1570713199:993316..993814 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000051 | genome | Sc0000051:985623..993814 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01342 |
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