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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000046:1755533..1763143+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01398.0 ID=Blg01398.0|Name=Blg01398.0|organism=Branchiostoma lanceolatum|type=mRNA|length=7611bp|location=Sequence derived from alignment at Sc0000046:1755533..1763143+ (Branchiostoma lanceolatum)
ATGGAGAACAAGCTGATCAGATGGGTGGCAGGCCTGTTCGGCTACCCCGC
AGGGCATGCTGGGAACATCACATCGGGAGCTTCTCTCTCCAGTCTCACCG
CTTTAGCAGTCGCCCGGGACAGCATGGAGCTGAAAGCCGCAGACTTTCAC
AGGTGACGTTTCGGTTCTAATGAGAAAGTAAATTGTTCTCAAACTCAAGA
ATTGACTCATCGGAATTCTTGACCGAATCTCTCGGTCTTCCTGAGCTATC
CGAACCAAGTGCTGTAGACACGTGTGACGTCAGCACAGGGTCAAAGTTCG
TTGGCAGTCGGTACCGCCCCCCGTCTTGGTTGAGAGAATATTTGTGTGTC
CTGATGTAAATGGCCTCTTAACCAACCTTGACCCAGTGCTGACGTCACAC
GTGCAGCGAAATCACGTGTCTACAGCACTTGGGCCAGATAGCTGAAGAAG
ACCGAGAGATTCGGTCAAAAATTCCGATAGGTCAATTCTTTGAGTTGGAA
AACAGTTTATTTTCTCATTATGTAATTTATCAACTTAGTGGAACTTTCAT
ACTAACGTTTTGGTTCGTTAAACTATTCCCCATCCTCGCTTGCCATGCCC
GCCGGTAGTGAATTCCCAGGTAAGACCCTGGCGTACTGGTCGGTGATACG
TCCTCCGTTTCGTTGAGTTAAAGCTGGCCAGACGTCAGCCAATGATCTTT
CGGTCAAGATGCATTGTGATTGGTTGGTAACCATCAAACAACAGGAGGGG
TAGATTCTGATTGGCTGACGGCTGGCCAGTGCTAAGGCAGCGAGAAGGGT
GAATCACATGTACAGGCCACTATTCTTCAAATCACGCAATCTATTGCTAA
GAAATGCCCCCGTAGAAATAATTATGCCTGGCTTTCTATGGCTTTAATGA
TGAAGGTTATTGAGGTATAACGGCAACAATTGTACAGCTTATACACAACT
GCAATTATCCTGTTATGTCTCTAAAAACCTCTCCACAGATGTGTGGTCTA
TTGTAGCGAGTTCACCCATTACTCTGTACTGAGGGGACTTCGGGCCGTTG
GGTTGCGGGAGGCCGTTCTGAGGACAATTCCACTGGACCAAATGTTCAAG
ATGACAACAACGGCTCTTGAAATGCAGATCGAGGAAGACAAGGAAGTAAG
ACAATGAGAAAAAGTCTAAATGTTTTAAAAATATATTTTCCCACTATTGA
ATACTCTTTCAAAGTTTAAAACAAATACCTTCTACTTCTTTGCAATTATA
TCATTTAGTGTACGTAAATGCTTTTTTAGCCTATACGTGACATGTTAAAA
TCGACAAGAAAAAAAATAGCGTTGTTTCAAACTCAACATACGTTTGTGGG
CAATTACCTGACTTGTTTGATTATGCTGCTTAAAAATCAACCTCCTTTGA
ACCGGGATCGTGAACGGCGTAGTAGCCTTGCCTCTGGAAGTAGAAGCCGT
CAGTTCAATCCCGGCTTTGTCGCTTACCCAAAATGCGCGCTACAGGAAAT
GGTCGCAGTCCTTTGGACTGGACGTAAAGCCATTGTCCAATGTTCACCGT
GCTTGTCAAAAAGAGCTGGGAGCATTTCCCAGGTAAAATGAATCTTTAAA
AAATGCACATAGCGTCTGCCTTCTCTGTCACAGCCAGCGGAATAATACTT
CTTCGGTGAGCTTTAGTGGATCGATATCTACCGTGGCCGGAGGCACAAAT
CGTATATAATATTTCTAATGCGGGTAAAGTCCTCGACAAAGTTGAATTTC
TTTGAATTTCTTTAGTGTTAGCTAGTACACCTTATATTTTTCATCTTTGT
ACATCTTTTGCTGGGAGCTGTAATCAGACAAGTATGGCAAAAAAATGCAA
TATAGGTCTTCATTATGAAAGACATCTTAGTCACCTTTGACCTTATCTAG
GGACCATCCATTATAAAGGAGAGGGTGTAGTCCCGGAAACTCTGGTGTGT
AGCGTGGCTCAAGACGGTGTGTCGCTCAGTAATCTCGAAGCATTTACGGT
GCCTGACTCCAGGAGCTTCTCTGGCTAGCTTATACGGTTTTGGCACCGTG
TAAATCTGTTTGGAGATTATCGCTCGGCAAAAGTCGGCGTGTCGCGCAGC
TCAAGTCGGCACGGTGTATCACGCAGCAAAAGTCGGTGTGTCGCGCTTTG
TACCTGTCGGCCACGATAGATATCAATTTCAGTTCCACTTACCCTTTCCC
TACACAGGAAGGTTTGTTGCCCTTCCTGGTCGTGGCAACTGTGGGCACCA
CGCTGACCGGAAGTGTGGATCCTGTCGACGCTATCGCTGATGTGTGTGAA
CGTCACAAGCTCTGGCTCCACGTTGATGCCGCGTATGGAGGGTTTTTCGC
TCTCTGTGACGAAATGAAACCGCTGTTTGCTGGTGTGGAGCGGAGCGATT
CAATTTTGGTTAATCCACACAAAGGTACGTATGTATGGAAATTAATTATT
CATTCTAATTTCAAACCATTGATTAGCCAGTGGCTCTGCTTCTGTTACAT
AAAAGTAATATGGGTTTATACAAGATATAAGTTTGGGTTAGGGACCTCAG
CTCTCTTGAAGGTATTTTGGAGAGGCCCATCATAAATCCTCTGCCATTGT
AACAGCACGATTGAGATTCTATGACAACAGTACCACGGTTTACAACCTAT
CTGACTGCACCGTAAGCAGTCTCATGCTACGAAATGTCATTCTGTTTTGA
TACATGCTATAATCCTCTTTATTCTAGGGCTGTTCACACCCGTTGGTGTC
AGTGTTTTGGTGGTGAAAGATGGAAAGAACCTCCAGCAGTGTTGTTCCAT
GGAGCAAACTCCGAGCTGCTTCACGGAATGTCAGCTGTTTTCGGCTGAAC
ATCTGTCTCCATCCGAGCTCTCCTTTGAAATTTCCCGGCCTTTCAGGTGA
AAAGATCGTTTACTCCTTTACTTGTACATGGTCATGTTTTTTTTTTCTTC
ACCTCACATAATTTCTCAATGGTGTCGTGTTGGCGACGTGGTTAGGGTGT
TTGGCCCAGAACCCAGAGATCCTGCTGGGTAGTCTGTGCGTTTAACTACG
ATTATATTCTTTGTTTTGCTCAAGCAAAGGAAATAATCTGTACAAATACG
TCAATGAAGGTTAAACATCAATGTAAGAAAATAGATACTAAAGCAAATGA
ATGGATTTATAACAAATCCATCAAGTTGCTTGAATGTGTAACTGTTTTCT
TGAAAATGTACCAGTCTTCGATATGACCCATCTGGGGTAGAGGAGGCTGC
TAGCTAATAAAATGGATGAAAAGAGCGTATCTTAAACTTTTGACATTGCC
CTAGGCTATCGCACCGGTCAGATTTAAGTGTGTTGGTCGCGAAAAAGTTT
CGACATTGCAATAAAAGTATGAATATGTATCTTTTGGACTTCTTCTTCTG
ACTCCTTCACAGAGGTGCTCAGATGTGGCTTCCCCTGAACGTGTTTGGTG
TTGGAGTTTTCCGTACGGCCCTGAAAGAGAAACTTCTACTGGCACGTTAC
TTCTACGGGAAACTTAAAGGTAAAAGTAACAGTTCCTTCAATTCTCATTA
TTTCTCAGGCATGTTGTGCCAAGAATGTCACACATAGGCTCAACAATCTT
CTTCTTTGCGATATTTATATTTCGCCTATACTACAGTATGGATGAAATAC
ATATTTTTGGTCATGTTCTTCTTCTTTTCCTGTCAAATGGGGAAGTGCCT
TTCAAATTCCCCTTGAATCTCCAAACTGAAGCTGTTTGTGGTTATTCTCG
GGACAAAATATATACAAAACTTCCAAATAGTACCTCAAATTCCTACCGCG
GCCTTCGACACTTGATGCCGCTGTGCGATTTCACAAATCACACAACTACG
ACTGAAAGTCTTATAGTTTCATGTATGTGTATGATGGCAGCATGTAGCCA
GAAAATCTGGAACGAAATGGAACGAAATGGAACGAAATGGAACGAAATGG
AACGAAATGGAACGAAATGGAACGAAATGGAACGAAATGGAACGAAATGG
AACGAAATGGAACGAAATGGAACGAAATGGAACGAAATGGAACGAACTAA
AACAACATATGTAACATTATGAAATGAAATACTAGTAGATAGTATAAGGA
GTAGACTGGAACAGGAATCTCTTTGCACCCGGCGTCTCCATTTTCAGGGA
AGAATATAGCCACACAAACGCGACAAAAAAGTTGTATTTAATATTATTAC
ATAGATTCAAGAAATAAAACACGTTATGTTATGTATTTACCACTCACTTC
TGTATTTAAAATGCTTCCTGTTCCGGTCTACNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTCGTTCCATTTCG
TTCCATTTCGTTCCATTTCGTTCCATTTCGTTCCATTTCGTTCCATTTCG
TTCCATTTCGTTCCATTTCGTTCCATTTCGCACTTTCGGGGGACCGCTCC
GTCCCCGTACGGAAATTTACTTCTCTGGACAAAACTGGAAGACGTCACGC
TATCTTCCTCAGAACGTCACACAATCGTCCAAAGAACAGCCAGCAATCTT
CTTCACAACTCAAAACGTTCTGCGCGACGCCAGAGCCCTTTAGGGAGTTA
CGCAATGTTCTTAAACGCGGCCGATTTACAAAATGAAAGCTCTCACAAGT
ACGAATGTAACGAACAACACAACCTAGCTAAAGGTCAGTGACCCCAAGCC
CAACCTGGCATGTGACTTGATTGACAGGACAGTTGTCTTGCAGGTGGCGC
AAGTTATTACAGCAATCAATCAGCAAAAAGGAATAATCATATGGCCTAGT
ATTTAAAGATCATAAATTTTATATGTATATGCCTGTCATATCTGCATACA
TAACTTTAATTGTAATTCTGGCATACGCCACTTCAGTGTGTTTGTGATTT
ATTATAGAATTTCCGTCAGTTTAGACCAAATATATATTGGCATTCTGAGA
GAGCCCATTCTTTAAGAGGGTAAATTGGGAAAACCGTATGTGGACTTGGA
TCTTAGGTGTTCGGGCCGTGGTAATTTTGGACTGGACCTTTTATATGGGG
GTGCCGCTAGAAGAGGCCATTCTTGAATGGGGGATTTAAAAAAATATAAT
TTGGACTTGGGTGACCCCATGCCGTTTTTTTCTTCATTTTTGAATATAGA
CCTTAAAAGTGATTTTATTGAGGTTTTTAGGCTATTTTAGAGCAAAAATG
TATATCTTGGCCTCCTGAGCCCTGGTATTTCAACCGAATGACTTGAAATT
TGATGTGGATGTGCTTTGAACAAATTTCTAAAGCACTACATTCAATTTTA
GCATACACCTCTTCAAAATGATTCATTCTGAGCTTTTTTCGACAATGTTT
GCCACTTCTGTCACTTCTAATACTATATACAGTGTTGGAAGTGACAGCCA
ATGGGAGCACTGCACTTCGAAATGCGACCGCCTAATTATGCAAGAGTGCA
TTTTTGAGAGGGTATTTTTCGACTGGTCTAGTTGACATGGAAGATTCCAT
TCTTGCACGGGGGGATTTTATTATTTATTTCAATTTTGAGCTGGAATGAT
TATGCAAGAGTTTATTTGTAAGCAGAAGTGTATTTGAACTGGTCTATTTT
ACATGAGGATGGTGCAGGAAGAGTCATTTCTTGAACGGGGGACGTTTTCT
AAATTATATTTTGGACTGAGGTACTTATGCAAAAGTCCATGTGTTTACAT
GGATGTGGTTTCTGACTGGTCCATATTGTGTGGATGTGCCACTGGAAAAG
TCCCTCCCTGTATGAAGAGACAATTTTTTTTTTTTAAACTCAATTTTGGA
CTGGAATGATCAATTCTTTTAGCGGAAGTATTTTAGAATGGTTCATTATG
ATTGAGATCGCTTTTTGAAGAGTCTGTTTTTGCATAGGGGGTCAAATTGG
GAAATCACCATTTCGAATTGGGATGACTTTGCAGTAGATCACTTTTGCGT
AGACGGTTTTTCTTAATATTTCAGTTTGCCTAAGTGTTATTTTAGGACAG
TCCATGTTTGCATGGGGAGGAGTATGGCTAAACATGCTGTATTTGCTCGC
AAATGTTGCCTTTCTAGTTACTAGTATAGAGATGTTTTCTGAATGGTCCA
TTATGCGTGGGTGGTCCCGTGAAAGTCCATTATCGCATAGGGGGACACAA
TCTCCATTTAGGATCGAATGACTTTGCAATAATTCTCTTTTGGGCAAAAT
TGTTACCACATGGGTTTCAGTCATTTTGTTACATCAATGGAATTAGATAA
TATGATTAGACACCGCACTTGATTAATTGAACTTGATCTGCATTTGATAA
GAATAGACAACGGCGTCTTCTCTGCCTTTCGGGATGAACGCTTCATATCC
ATACACAATGTTTTTGTAGAAGCATAGGTATCTCACGTATTCGGTACAGA
AAGATTCCTTCGTACTAAACTTATATGCGTTCATACGTCATGCCTTGCAA
CTATGAGGTGGCTCTTGAAATGTTTCGAACGTCTTCCGCAATTGCGACGG
ATTTTTGTGTTAGCCTAGTTTTTCGAATTATAGCTATGAGATTATCGTTT
TTTAATCATCCACAGGGCTATATATTTGAAAATATTCTAGTTATTTTTCT
CACGAATCAGTATATTGTGCAAAACAGCATAGCTATTCGTGATTCATATT
CTTTTTCTTTAATCATGAATTCATGAATTCTAGATTCCTCGCTTATCAAA
AAAATACTGCATGTGTTTTCCATACAGGAACAGATGACTTTGAGATACCG
CTGGAGCCGGAACTGTCCGTAGTCGTGTTCCGTGCTGTTGCGCCGCCTGG
CGTCGACATCAATGACTTCAACCAACAGCTCATGGAGGGTCTGAATTCTG
ACGGCAAAATTTTCATGACGCCCGCCGTACTTACCAATCAGTTCTACCTG
CGTGTCTGTGTCCTGGCCTTCAGGACCCACGTTGAGCATGTTGATCTTTG
CTTCTCTGTGATCCAAGAGAAGCGTCTTCGTCTTTGGGAGTCACTTCACT
CCGATGCCTAA Coding sequence (CDS) from alignment at Sc0000046:1755533..1763143+ >Blg01398.0 ID=Blg01398.0|Name=Blg01398.0|organism=Branchiostoma lanceolatum|type=CDS|length=1086bp|location=Sequence derived from alignment at Sc0000046:1755533..1763143+ (Branchiostoma lanceolatum)
ATGGAGAACAAGCTGATCAGATGGGTGGCAGGCCTGTTCGGCTACCCCGC
AGGGCATGCTGGGAACATCACATCGGGAGCTTCTCTCTCCAGTCTCACCG
CTTTAGCAGTCGCCCGGGACAGCATGGAGCTGAAAGCCGCAGACTTTCAC
AGATGTGTGGTCTATTGTAGCGAGTTCACCCATTACTCTGTACTGAGGGG
ACTTCGGGCCGTTGGGTTGCGGGAGGCCGTTCTGAGGACAATTCCACTGG
ACCAAATGTTCAAGATGACAACAACGGCTCTTGAAATGCAGATCGAGGAA
GACAAGGAAGAAGGTTTGTTGCCCTTCCTGGTCGTGGCAACTGTGGGCAC
CACGCTGACCGGAAGTGTGGATCCTGTCGACGCTATCGCTGATGTGTGTG
AACGTCACAAGCTCTGGCTCCACGTTGATGCCGCGTATGGAGGGTTTTTC
GCTCTCTGTGACGAAATGAAACCGCTGTTTGCTGGTGTGGAGCGGAGCGA
TTCAATTTTGGTTAATCCACACAAAGGGCTGTTCACACCCGTTGGTGTCA
GTGTTTTGGTGGTGAAAGATGGAAAGAACCTCCAGCAGTGTTGTTCCATG
GAGCAAACTCCGAGCTGCTTCACGGAATGTCAGCTGTTTTCGGCTGAACA
TCTGTCTCCATCCGAGCTCTCCTTTGAAATTTCCCGGCCTTTCAGAGGTG
CTCAGATGTGGCTTCCCCTGAACGTGTTTGGTGTTGGAGTTTTCCGTACG
GCCCTGAAAGAGAAACTTCTACTGGCACGTTACTTCTACGGGAAACTTAA
AGGAACAGATGACTTTGAGATACCGCTGGAGCCGGAACTGTCCGTAGTCG
TGTTCCGTGCTGTTGCGCCGCCTGGCGTCGACATCAATGACTTCAACCAA
CAGCTCATGGAGGGTCTGAATTCTGACGGCAAAATTTTCATGACGCCCGC
CGTACTTACCAATCAGTTCTACCTGCGTGTCTGTGTCCTGGCCTTCAGGA
CCCACGTTGAGCATGTTGATCTTTGCTTCTCTGTGATCCAAGAGAAGCGT
CTTCGTCTTTGGGAGTCACTTCACTCCGATGCCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01398.0-exon-Sc0000046-1570713199:1755533..1755684 | Blg01398.0-exon-Sc0000046-1570713199:1755533..1755684 | Branchiostoma lanceolatum | exon |
| Blg01398.0-exon-Sc0000046-1570713199:1756521..1756677 | Blg01398.0-exon-Sc0000046-1570713199:1756521..1756677 | Branchiostoma lanceolatum | exon |
| Blg01398.0-exon-Sc0000046-1570713199:1757740..1757956 | Blg01398.0-exon-Sc0000046-1570713199:1757740..1757956 | Branchiostoma lanceolatum | exon |
| Blg01398.0-exon-Sc0000046-1570713199:1758260..1758428 | Blg01398.0-exon-Sc0000046-1570713199:1758260..1758428 | Branchiostoma lanceolatum | exon |
| Blg01398.0-exon-Sc0000046-1570713199:1758945..1759051 | Blg01398.0-exon-Sc0000046-1570713199:1758945..1759051 | Branchiostoma lanceolatum | exon |
| Blg01398.0-exon-Sc0000046-1570713199:1762860..1763143 | Blg01398.0-exon-Sc0000046-1570713199:1762860..1763143 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000046 | genome | Sc0000046:1755533..1763143 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01398 |
|
