Blg01403.0 (mRNA) - B. lanceolatum

Overview
NameBlg01403.0
Unique NameBlg01403.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000046:1040563..1043817-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01403.0 ID=Blg01403.0|Name=Blg01403.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3255bp|location=Sequence derived from alignment at Sc0000046:1040563..1043817- (Branchiostoma lanceolatum)
AAGATATCACCGTTTTCCCGCCGCTGGAAGATCATTCTGCGAGCAGAAAC GATCGTCATCGGACAACTTGGTCAACTTTCCGGAGATCTATCTACCAGAC AGACTGACAAATAGCAATGGGTGCTGCAACAAGCGCGGTGAGATATAAGC TACACATCTCTTAAGTTTATGTATAACCGTTTATGTTTTATCTCAAAGTG ATTTGTTAAAAGTTCTCAAAAATATACAACAGAAATTATCGATGACAAGT CATCGAAAAGGTGTATCAAATCTGACTTTTATTTTAATTTACTACATTCA CACGTTTGCATACAAGTAACCAGACTTACAATTTAGCAAACGAGACGAAT GATTAACGCTTTTTTTTTCTTTTTCTTTCTCTTGCAGAACGTATTGCAGG CTATGCCTGAACAAAAGGGGGTAGGTACTTTACTTTCTCTCAGTCCATGT AATCTCTGGTCCCAACCTGCTACTCTAATCATTCAACAAAAGTTGTCTTG TTATCTAGTGTAAACAATCTGATGAGACAACTCACGACAAATATCATAAC AATATTCTATAGATATTGTATTCTATTATATGATATAACCAAAAATAAAC TATCTAGTATGAATTAAAATGCGATCGTCTAATGTTGTTCAAGTGTTCTA TTGACCATATATAAACATTATATAAAGACAAGGTGGATTTAATTTCTCTT TGTCGACGTAACACGTTGAACATTAGACCAGAGCGAGTTTAGTTATTAGA GTACTGTGCTCTTGTGTGGTGTAGCTAGCCTGTGGTAAAGCATATGCAAG TTAGCAAGCAAATGAGAACATTGACTGAGGATTTGTCAGGACAGGACTAG AAGAACTAGAAGTGGACTGTAGTACATTTAAACAGTCTTGTAAACGTCTG ATAGAATATATAGAACATATATTGAATATAGAGAAAAGGCGTACGAGGAG AGATCCGTTTGATGTTGATACAACAGGTGCTCGGTGTTAGCCATAATGTT CTTCATGTTAGTTTCCCATGGCTTTTATGCTCTCAACAAGATGACTAGGG GAGGGGTTCGGGAGCCTCGATAATTACTTTTATATCATATCTTGGCCGCG AAAACGTTCGATACGAGTTTCCGGACCGTGTGATGATTTTCAGGGTTCGA AGTTGTATCACACGGGCTTCCATGGAATATCTAGAATGCATTTTGAAAAC ACCGGTGGCGCCGCCGTCGAAAATTTGAATACCGGATTCGGAGGGTGGAA TTAATGTTGTAACAGTTTTTGTTGTTCGAGGACACAAAACTCCCTCAACT TCTGGCGCATTCCGCATTGAAATGTGTGTTTTCTCGGGTGGGTATGGCCT ACGGCCGTCGGGCGATCCTACCCGCGGTCGGGCTGGAACCTCGGGTGTTA CGGAATACCCCGTGTTGTAGTCTATATATATATATATATATTTATGACAC TCCTACCTCGATCACCCTGTCCTAAACAAGAAAGCTTTGCGTGAAAAAAA ACTTAAACTTTTTCAACGATAACGGAAAAAATTGATACATGGTAAATGTT TGTTGTTTCAAGCACCTGATTCGGTTTGTATTGTGTTACAGCTGTTCAGT AAAGCAGCTGCTGCAGCTGTAGGCATGGTGACTGTGAAAGCTGCCCCCAT GGGAGCCAAGGCCTGTACCTACACCTCACCTGATGACACCAGGTACGACA TACATGTTCTTTTCATTCCTTATCTTGAAAAACAAACCGTTTTTAAATGT CCATTCGTGAAAACAAATTATCACTATGTGTAGCATATGGGACCCTATGT CTTAATCCCATGTGAATATTTCTCTTGTGGAAGTCACGTGGCATATTGAC AGTATTGATCGATCCCATTTAACAGCACAATGTTGAGCTGTTCAATCACC TAGTCTATGTTCCCGGATAGTTAGTAAATTTACTTAACGGAAAGAAGGCC TAAATTCTCTCTTTAGCAACCGTAGCCTTGTACGAGATGGCTGCGTGATT TGTATATTTTGCAAATTGATTCAGTTTTATCTTATTTCTATAGGCAGCAT TCTTGATAAACTTAAAATTCCTTGTAGATAATGTCTAGAGATCTACTGGT ACTTGTACCCTCTGTTTTGAGTTGACCACCAACATTTTCCCACGCCATCC TTTGCAGCATCGACAAAGGCTACAAGGTGTACCTGGGAAACTGCGCCGCC TGTCACGCGTAAGTAGTCGGCTTTATCAGTACTTGTTGTGTTTTCTTTTC TCACTTCACCATTACTGATCTTGATAAACGACAACGTCGTCGTCCTTCTA GCGGGACTAAAATAATTCTTCGTCCAATACTTTATTTTGTTCCAAATTAA ACCTCCAGGGGGGCCTTATATTACTTGTCAATGAGAAATACATATTAAGG ATCATATGTAAAGTTTGCATCTATGGGGTACGCATATCGCCACGAAAATC ATAGGGGGTTGCCCTACATTGGAAAAGCCAATGTTTTGCTGCTGAATGAA TATTGTTAGAGTTCGTTTGAAAGAGATGTTAAGGTTATGAATATGACATG TAATACTTTACTTTGCTTGAGTCTGACTAACATTTTCATAGAATTTATTT GCTTTATAAGAGAAGTAATTCAATTTTTTTTCTATATTTCTAGCGGCGGC AACAACTGATCCCGCTTACCTCAGACGGGCATCGGATGACGTCATTTCCA GAAAACGATAACCGGAGGAATTCCAAGTGACGTCAGTTACACGTAGTTTA GAGAATGTGGCGTGCCTCTAATATCTAATAACATTTACATATTTCCGTAT AACAAAGGACATGTTGTTTTTGCACAATAAAACTGTTTATATATTTAACC AATGCATCCTACATATCGACCCTTTCATATGTATACCGGGATATCTCTGT ATCCATGTAAACAAAATAACAGCATAACAATTCGACAGGTACTTGAAGTC AACGATGGCAAGGATGGGAACTAATTGTTCCATTTTGTTTTTAATAACAA AAAAACAAGCCTACTGAAGTTTGTTGATGCAATTACAATATCATCTTTCC CCCTGATAGCGCTAGCGTAACTACAGTCCGAGCCTAATGACACACAGGAC AAAAGAAAAAAAATGATCAAACGAGCAAACAGTTAAAGTAAAACAAAATG GCGGCATACATGGCGACTATGTACAGAGGCTTACGTCACAGTAGTTGAGC ATTAAAAATGGAACAATTGTATATGATTGTGTATCGCTTTGTGCTGTAAT AAAAT

Coding sequence (CDS) from alignment at Sc0000046:1040563..1043817-

>Blg01403.0 ID=Blg01403.0|Name=Blg01403.0|organism=Branchiostoma lanceolatum|type=CDS|length=222bp|location=Sequence derived from alignment at Sc0000046:1040563..1043817- (Branchiostoma lanceolatum)
ATGGGTGCTGCAACAAGCGCGAACGTATTGCAGGCTATGCCTGAACAAAA
GGGGCTGTTCAGTAAAGCAGCTGCTGCAGCTGTAGGCATGGTGACTGTGA
AAGCTGCCCCCATGGGAGCCAAGGCCTGTACCTACACCTCACCTGATGAC
ACCAGCATCGACAAAGGCTACAAGGTGTACCTGGGAAACTGCGCCGCCTG
TCACGCCGGCGGCAACAACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01403.0Blg01403.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01403.0-exon-Sc0000046-1570713199:1043681..1043817Blg01403.0-exon-Sc0000046-1570713199:1043681..1043817Branchiostoma lanceolatumexon
Blg01403.0-exon-Sc0000046-1570713199:1043398..1043430Blg01403.0-exon-Sc0000046-1570713199:1043398..1043430Branchiostoma lanceolatumexon
Blg01403.0-exon-Sc0000046-1570713199:1042126..1042226Blg01403.0-exon-Sc0000046-1570713199:1042126..1042226Branchiostoma lanceolatumexon
Blg01403.0-exon-Sc0000046-1570713199:1041610..1041660Blg01403.0-exon-Sc0000046-1570713199:1041610..1041660Branchiostoma lanceolatumexon
Blg01403.0-exon-Sc0000046-1570713199:1040563..1041174Blg01403.0-exon-Sc0000046-1570713199:1040563..1041174Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000046genomeSc0000046:1040563..1043817 -
Properties
Property NameValue
GeneIDBlg01403