Blg01421.1 (mRNA) - B. lanceolatum

Overview
NameBlg01421.1
Unique NameBlg01421.1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000046:238546..248482-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01421.1 ID=Blg01421.1|Name=Blg01421.1|organism=Branchiostoma lanceolatum|type=mRNA|length=9937bp|location=Sequence derived from alignment at Sc0000046:238546..248482- (Branchiostoma lanceolatum)
CAATCAGCAGTCCGCCTGCGCCCATCATGTCACAACCTCGACCAGAGAGG TCTTCGACTGACATTCTTGCCCAGCTACGATCGGAGGGAGTGCTACCCGG TCTGAAACAGCGCGACAATGCCGTCGCCTTCCAAGTACCGGCCGAGAACC CCGACACTCCTCCCCGCTACCACATGAGGCTGAAGAAACTCGAGAAGAGG ATGGAGGAACGGCGTGAGAAGGTGAAGAAGCCCTGCCCGGAATCTGCTGA CGATCTGAAGAGGCAGCTTACCGACGCGGAGGTTAGGAGACAGGTAACGA AATGGTTGGACTTCAGACTTGGAAAATGACATGGTTGGATATGAACATCG GATGAAAACAACAGAGATGAATGCTCAATGGTATGGAGATGTATAGACAG AGAGGCTAATCGGAATGAACGTAAAAAAAATGAAGATATTTTTGATTCAC AGTATAATTGTTAGGTGCTGTTTTCGGTGTGTCTGTGTGTTTATTCGTTT GTTTGTTTGTTTTGTTTGTTTGTATTTCCGTTTGTGGTCCGCAAAACTCT ATATAGGTGGATTGTAATGACAGTTGGGACGTGGGTAGGTATTGGAAGAA CGAATGTCAAGGACAAATATTGGTTTCCTGGCGACATCCCTTGGTACTGC AACGGACCAGTTTTGTATGTCTTTGTCATGGACGTACATGTACTATGGTC TTGTTCTTTTGGTGACAATTTTGATGCCAGAAGATAGTGGCGTAGTCTTA TGTTCCCTAGCAACTTGTTCTAGAACCGCTGTATTTACATGTAGCGTTTT GTTGTAAATCTTTCGAAGAGAATAACCAAACGATGACGTTTTTTTTAATG ATTTAAGGCATGCAGTTAGCTTTGACAAAAAAGCACACAATTCAATGCCA ATTATGCAGATCAGAACTTAACTTGAATAATCAATGAGGACATTCTATAA GTCCGGTGCTTTCCATAATAGTAGCCTCTACCAGGTCCCGCGGATGGCTG GAAAAAAAATAGTAGAAGTTGGCCAAATTGTGTGAATAGTATGCTAAGGG TGTCGGCTACCGTGGATAGGATCATGTTCCATCCATATCTAGAGGTATCA ACTTGTAATTTCTATAGCGGCATAACTTCTCTGGCATATTATATCTAAAT ATCTATATCATCACGTCTATTTTGCCAATTTCTTCGAGTTTTCCAGCTAC ATATAGAGCCATAGAGTCATAATAGTACTTTATACAAACCCGAAAAACAC GCATTTCAATGCAAAATGCGCCTGAAGTTGAATGACTTTGTGTCCTCGAA CAAAGAAATCGTAACAACATCGATTCCAACCTCCGAATCCGGTATTCGAA TTTTCGACAGCGGCGCAACCGGCGCACTCGGAATGGAAAGGAAAAGGAAA GTGATCTCGAACCAGTTTAGCTCAAATGAACTCAATGAACTCAATGAAGA TGAGTTAATCTTCCACTGGTCGTGACAGAGAAGACATACGCTATGTACAG TATTTACAGGTTCATTGTACCGGGGAATTTCCCCTAGCTCTTTTCGACAA GCACAATGAACAGCGGACCACGACTTAACGTCCCGTCCTAAGGACTGCGA CCCTTTCCGGTAGCGTGCATGTCGGGTGAGCGACATTCTAAATATTCTAT GGAAGCCCGTGTGATACAACTTAGAACCGTGTGTGATACAGAAAATTATC ACCCGGTCCGGAACACCTGTATCGAACGTTTTCGTGGCCCAGGTATGACA TAAATGTAAGGTAATTAACTCTAACAGATACCGATCATTACAGGAGCTGC TAGCCAAGAAGAGCGGCAGGATTTCCACAGAGTCTGCGGAAAAAGCAGCA AAGATTAAGGCCAAGAAGGCGGCCAGGAAGACGAGCAGCACCGCTTTCGT CGTCACCTCTACAAGCGACTCTGACATCGTCGGTACACGGAAATCCCAGA AGACCAAACGGATGGAGAGACGCATGACTGAGCGAAGAGCACGCGTTGCA AAGACATCAACAGCTGACGCACTAGAGACGCGTCAGAACCTCGCCGCAAA ACGCCGCAAGGTGAGTCAACTATAAACCCATTCGTAGATTCGAGTGCGCA TGTGCAGTGTCAAAGAATGGTTCGAATTCTTGCATTTGTTTGAAGAATGT TCATTATAGTTCCGTCTCATTCATTCAAGTTTCCAAGCAGATGTAGACAT GCAGAAAGGTGACGTTTCTCAAGCTCCTGGTTTTATAATAATTGTTTCAA ACAGCGGCTCTTCAATGCTTGTCCATTGCTGCGTTTTGCCGCAGATGTAG ACAGGCTCCGCGCTTCATGTAACCGGGAACTTGAGAAAGGTGACGCCTTA TGCTTAGGTCAAAATTGGAAAAAGGGGCCCCGCCGAATAGTTCTTTTTTT TTTCACTTACGGGCTTGATCTCTCCGTGGCCCTGTGGCTGCCGGGCTCAG TTTCAAGTTGGGCCCGGCCGGGACTCCGAATCATTTTAACTCGTCGTTAT ACTCAACGCGGGAATGTTATCAAATAGACGCCGTGGGGTAACCGTGCGAG CACCGAGAGCTGCTTACCGTAACGGGAAGTTCACTGGGACAAATTTGTGG CTTCGGGTCCCGGCCGGGCACCGGCGCAATTGGGACCGTAGCATTAGACT TTCTTCAACTGTTTGGAGATAACGAAAATAATTTCATCAGGTTGGTAGAA TATATGATGTAGGAGATTCTTTCTTTTTCATAACTAGTAATCCTCACCCG CTGACGTTGCGGTGTCTGTCAGACACCTTCTTCAGAGCTTCTGACTGGAG TACTGCTTCTCACAGCTATAAGTAGCCGATGTAGTTGTCGCTTTTGCGGT GAGAACACTGTCCCAGACGTGGCTAAGTTTGGAACCCCCCTCGTCCCGGT TAAACTGCGTCATTGACTGGGAGGCGGCCAAGGTAATCGGCAGAGAGGAT AACAGACGCACCCGTTGGATTAAGGAGGCCGTCTGGATAAGGAAGTCAAT ACCAGTAATGAACCGGAACGAGGGGGGATACAAACTTAGACACGTTTGAG ACAGTGGTTTCACCGCAAAAGCTGGTTGTGAAAAAAAAGAATCTTCTATA GCCTGTTTGGAGATTATGTTAATTTTTCCATCCCACTCATACAGGATCAA GAGATGGCTACCGTCTCCAAGGCTAAGAAGCTCGCCCGCCCACACATCAT CAGCCCCGCCCAGCAGGAGCCAGGCTGTGCCGGCAACTAAAGAGACAGTC CCGTGGATTACACCAGTGTTGCAGGGTCGGACAAGAGATTATATAAGCCG ACAAATATACCCGGGCCCACTGCCAATATTTGGTGATAGTTATTGTTGAC TCTTGTTATGTGGGGCATCGCAGAAAAAAAGAGTTCCGAAGTTGTTGTTT TTTCAAACCTTCATGGAAAATTAAAAAAAAATGTTCATGTTCAAAACTTT TAAAGAGAATTTGGTAGAAATCCAGACAGACTATAGCCTTACCTTTCGAA TCGGTTAACAAATCACTTAAACTGTAACGTTACACTATTATCATCTTCTG ACATATGTCGTAAATGCTGTTGTTTAACATCTATTAAAAATCAAGCAAAG CTTGACGTTTTTATTCACAAGCCTTGTGTGGGACTGTTCTTAGCACTTGA CGTCTTAAGTGTCACCTTCAAAATTGACGTCACTTATGTCACATGCCGCT AGGCTTCACACCATTGTGAATGCCAATTGCCTTGCTAATGCTAAGCATAG AAAAGTAACTATAGACAAATGTAAAACTGGAAGTTTAACCACAACTACTA TTTACGACGATTACAAAAAGAGTAAACCATGTGGTTAACGACGAGAGACA AAGTACACTGGCGTTCCCTGCCTTAATAGAGAAGCAGAGCTTCGCATCTA GCACGGAGGCAAAACGGTAAAGTGCTCACAGTTGCTAGGCGACAAAATAA ACAGCCTCTCACAGGTTCGATTGTGTTTCGTATAGTAAAAACTTGGGAAT GGGCTGTAATTAACCCTGAAACTACACCACACTAATGGTGCTACAACAGG CTTTCTTTGACACCCTCTCTAACAACGCTAACGTTAAAAGATCCTACGTG GTGGTTTGCTTTGTTCTTCTGATATCAACTGTAAAATCATGTTAGCCACA CAAGACTACATTACAGCAACAAAACGTTTTTAGATGTGTGTACTTTTTGC TTTTCGTCCTCCTTTCAAATAGGCTTCTGTTATGTATCTACATGTATTCA TTCACTTATTCACACGTCTTGTCAAACATCTTATTTCCATAATGTACAAG TGACGGCGAGAATATAAGTTCAGTACAACTTGAATCCGCCGTCACTTCGT CTCTGTCACTTCATTTGTATTATTTGATGTCTTCCTTGAATAAAAAAAAC ACTGGGTGTAATAAATCAACAATCAGTACATTACAAGAACTAAAAAGCTA AACACAGCAGGGAGACCAAGTTCATACAAAGTCTGTTGCTGGGAATGGCG GTGGTGTGTTACAGAGATGAGTCGAGAGTGTCCGACTTCAACTGTGTCAA GCCAGCAGTCCTGAGGTAATTGCGCATGTGACTGACAGTGTAATGTCTCG TACATTCACGCGTGTGTTCAGTGCTGCAAGTATCGCACGCGAGCTAGCGC TAACATAGTGGAAAGTACCGTCGCCAATAGTTAATATGTATAACTACTCT TGAGTAGGCTAATTAAGTAGATTTTCGTTAGCAATACACAGTACTCAATT CATTTAAATCCGACCTGTCAAAGATATTTTGTAAAGAGCATTCAATTACT GTCCAGAACAGATGAAAAAAGGACAAAAACTAGGTAAGACAGGACAGTAG GACGACAGGAATAGAGAGGAGAGGATGTGAGTGTGAAAAAAAACTGTTCC TCGGCCACGTCAACTCTTGTGCGTCTGTCATCACTTCATCCCAAATCCTT GGATCTTTCCTTTTTTTCCACACATGCTCGTCCTTAGCACCGCTAGGAAG CGATATATAGGCTTTAATAGATCATGGGCCTTCATCGAGCTAGATTGTAA CCTCAAACTAAACAAAATAAACTCATTGGAATTCACAGCTGTGCGCTCCC AATATACTTAAACCTCCAGAGTTCGAAACGCTATTACAATTAGTTTAACT TCATGCGTATAGCAATTACCTATAAAACAGGCTAAAACGAACAGAATTTA CCTAATAACTTTTATACCGATATTCAATGTAAGTTCTCCAACGCCATTTA TGACGCGGAACGATTTGCTAACGTTCCTCTAACGTACATACATCGTTTAT GATGTCATATTCCATCTCCAAGCTTTGTTTGGAACAACAAACATTCAACC CCCGTTCGTCACACTGACCGGACACGAACACAGTGCCTCCCGAGATGTGG GAGACGATTTTAACATTTTTGTCGTGTTGCACGACTTCGAACAAGATTTC TCCTGAGGAGACGCCAGCAGATAAACATGAAGACGAGACCATAGCCAGAG AGACCGCGGGTAAGTTAACGCACCTTTACAACAAGATTGGCAACATAAAA AGATGTTGCCATGGCGACGGTGGTCTCTGTTAACGTTTTCGTTGTTAGCC CACATGCAAATAAGGACCTCGCAGAAATCATATCAGTCGATCACCTTCTC TACCAAAATAACACAAGTGTATGAAAATCTTGTTTTCACAAAAAAAGATA TTGTACCATTTCCTCATAAATGATTAAATCNAAAAAAGATATCGTACCAT TTCCTCATAAATTATGTAAATGAGGCCCTCTATGCAAGATTTGTGTCTAA TAGTGGCCACATTTACTTAACTTCCAAATGGTGCAAAAATGAAATCCCCA TCATTTACCACTATGGATTTATAGTATTTTGTCATAAATTATGCAAATTA AGTATTAACTTGCATAATTGATATCTATCGATATTTATCTCTTTCTCAGT TACATATGTCATGTGTTTGAGAGTCCTATAATAGAATGCAGCTGATTTAT TAACTGTCCTCATTAATTATGCAAATCAGATATTGATTTGCATAATTGGC ATATGATTATGTAAATCATCACTTAAGCTATCTACACACCAAAAATTATG ATGATCCGTCATCCCCTTCTTGCGTTATTCTCTTTCAAAGTTTGAGTCAC AATCAGCTCCTGCAGTTCCAGAAAAAGTCGCTAGGGGGTCCAAATCTACA GGACGTATTTTCCTAACAAAGAGCTATCCACCACTTAAAAATCATGACTA TAGCATGTTCAGAAGACGAGATTTGAAAAGTTAAAGTTCCCCTGCAGTAC CATAGAAAGTTGCTAGAGGGCCCAAAATCCAATTATTACAAGGTCTCCCA CAGACCTACCCACCTACAAAATATGAAGACAATACATCCAGGCATTCTTG AGTTATCGTCCCATGGACTTTCACATTCCTATACAATTCCTAGAATTCTT GCAATCTGCACACAATATAGTAAAAATTTGGCTCGCCCCTGAGGCGTCGC CAAAAATGCACCAAACGGTATCGTCTGGTTCGAGTCTTTTATGGCCACAG AAGTAGCACGGAGTCCAGTCTTCTTAGGTTCTGTCCGCTACCCTAGCTCC GATCCGGTAGCGGACTAAATCTGGGCTCCAGGCTAAGGCTGGACTCTAGG CTACTTAGAAGAGAGATGTGGGTCTGGTTTGGACTGTACTGTCGTATATG TCCCCATAGAATCATAAGCTCTCCTTTTATTTCAAGGTTATTGAGGGTTA TTTTCATAACTTGTACTAATACGTTCAATTGCCAAGAAGGTTGAAACGCC ATAGGCATTTTGTCGTCTAACACAAATCCGTCCGTTCCCATGTACTGAAG GGACAATTGTTCTTCTCGATTTCAACTTTTTTTTTTTCACCTGCACCAAG AAGGTTGCGTTTTCGGCGCCGTTCAGTGTGGTTGGTCTAGTGGTTGGGTG TGTTTATGGTTGGTGCGTTTGTCTGCCTGTCTGTTTGCTTATTTTTTGGG ACAGCATAACTCGAGAGGCTGTGCATTCATGATTTGGTGGGTGGGTAAGA AAACGAAGGTCGAGTTTGATAATGGGCCACCTGGTGGCATTCTACGGCAC TGTAGGAGAACTTCCGGTTTTGATATCTTTTCAGAAGCGTCAGAAGTTAT TCCAATCAGCAGCCCGCCTGCACCCATCATGTCTCAACCTCGACCGGAGA AATCCTCGACCGACATTCTTGCCCAGCTACGATCTGAGGGAGTGCTACCC GGTCTCAAACAGCGCGACAATGCCGTCGCCTTCCAAGTACCGGCCGAGAA CCCCGACACTCCTCCCCGCTACCACACGAGGCTGCAGAAACTCGAGAAGA GGATGGAGGAACGGCGTGAGAAGGTGAAGAAGCCATGCGCGGAATCTGCT GATGATCTGAAGAGGCAGCTTAGCGACGCGGAGGTTAGGAGACAGGTAAG GAAATGGTTCTACTTCTGACTTTGAAAATGACATGGTTGGATGTGAACTT TAAAGCTTCGCATGAAAACAACAGAGATGACGGCTCATTGGTATGGGGAT GTATAAACAGAGGGGCTAGTCGGGATGAACGAAAAAAAAAAGTGAAGATA TTTTTGATTCACAGTATAATTGTTAGGTGCTGTTTTCGGCATGTCTGTGT GTCTGTTCATTTCTTTGTATTTCCGGATGTGGTAAGTATTAGAAGAACGA AGGTCAAGGCCGAATATTGCTTTCCTGGCGGCATCCCTTGGTACTGCAAC GGAACGGTTTTGTATGTCTTTGTCATGGACGTACATGTACTATTTGTTAT TTGGGTGGCAATTTTGATGCCAGAACATAGTGGCGTAGGCTTGTGTTCCC TAGCAACTTGTTCTAGAACCTCCGAAAATAATTTCATCAGGTTGGTAGAA CATAGGATATTGGAGATTCTTTTTACACAACCAGTGAATCTCACCCGCTG ACAGTTTGGTGTCTATCAGATACCTTCTTCAGAGCTTCCGACTGGAGTAC TGCTTCTCGCCGCTAGAAGTAGCCACCTAGCTACTTCAGCTACTTCTAGC GGCGAGAAGCAGTACTCCAGTCAGAAGCTCTGAAGAAACGTCAGCTTGAG ATTCACTGGTTGTGTAAAAAGAATCTTCAATATCCTTTGTTCTAGATTCG CTCTGGCGTTTTGGTGTAAATCTTTCAAGGACAATAACCAAAGAAACGAT GACGATGATTTGTGGCATGCAGTTAGCTTAGACCAAAAAAACACACAATT AAGTGCAAATTATGTACAGCAGAACTTAACTGGCAAAATTAATGAGAACA TTCTATAATTCCGGTGCTTTCTATAATAGTAGCCTCTACCAGGCCCCGCG GATGGCATGTTATATCTTTATATCTATATTATTACGTCTATTTGGCCAAT TTTTCCGACTTTTCCAGCGACTTGTCGAGCCTTGTAGAGGCTACCATATA TAATAGTACTTCATACCAACCCGAAAAACCACAAATCTTTTTATGCAAAA TGCGCCTGAGGTCGAGAGACTTTTGTGTCCTCGAACAAAGAAATCGTAAC AAAAACAAACAAAAATCGACAGGGGCGCAACCGGTGCACTCGAAATGCAT TCTAAATATTCTATGGAAGCCCATGTGATACAACATAGAATTCTGTGTGA TACGGAAAATTATCACCCGGTCGGGAACACCCGTATCGAACGTTTTTGTG GCCCAGGTATGAGATAAATGTAACGTAATTAACTTTTGTCAGGTGGAACT TTAACAGATACCGATCATTACAGGAGCAGCTAGCCAAGAAGAGTGCCAGG ATTTCCACAGAGTCCGCGGAGAAAGCAGCGAAAATCAAGGCCAAGAAGGC GGCCAGGAAGACGAGCAGCACCGCTTTCTTCGTCACCTCCACTAGCGACG CTGACATCGTCGCTACCCGGGAATCCCAGAGGAACAAACGGATGGAGAGA CGCCTGACTGAGAGAAGAGCGCGTGTGAGTAAGACAGCGACAGCAGAGGA GCTGGAAACGCGTCAGAACCTCGCCGCAAAACGCCGCAAGGTGAGTCAAC CATAAGCCCAGTCGTAGATTCGAGTACGCATGTGCAGTGTCAAAGGTGAA GGCCCCTGATATTTTGTTTTTGTTAGTTTGTAAACAAAACACGTCTGGGC GTTGTTATGCAAATCAAGACAATGGTCGTGACAGAACTATATACAAGCCA GGGGCCTTACCCTTTGACACCGCACATGCGCACTCGAATCTACGAATGGG CTTATTCACTATGATAAATACATGTACCACAATGTAGGAAAAATCTTCTT GGCCATAACAAGAAAATCTAATGGGTAAGATTCCTACGAGCATCGATTTT TGCCTAATTTGAAAAAAAGGAGAAATTTCGTTCCCTGCCGGCGATACATG ACAGGAAAATTTCGAAATTGAGAAAAAATACGTCACAGTTACTCGTACAA GTGACAATATTGATGTATAGCCGTTGATGTAGTTGTAGTGAAACTCGGCT ATTACACTAGTGTCAATTTTTGCACTTCTTGATCATGAATACACTTTCTG CACTTCCTGATCATGGCGAGGGTAAGTTTTTGGGCCCAGCTGGGACCCCG AATCATTCTAACCCGTCCTTATAATCAACGCGGGACCCGGTAACAAATAG ATGTCGTGTGGTAATCGTGCGAGTACCGGGAGCTACCCCTAGTACACGGC AGTTCACCGGGACAAATTTGTGGCTTCGGAGACCGACCGGGACTACACAC CCGACGAGCACCGGCGCAATTGGGACCGTAGCATTAGACTTTCTGCAACT GTTTCGAGATTATGTTAATTTTTCCCTCCCACACGTACCAGGAAAACGTG GTAGCTACCGTCTCCAAGGCTGAGAAGCTCGCCCGTCCCCACACGATCAG CCCCGCCCAGCAGGAGCCAGACTGTGCCGGCAACTAA

Coding sequence (CDS) from alignment at Sc0000046:238546..248482-

>Blg01421.1 ID=Blg01421.1|Name=Blg01421.1|organism=Branchiostoma lanceolatum|type=CDS|length=630bp|location=Sequence derived from alignment at Sc0000046:238546..248482- (Branchiostoma lanceolatum)
ATGTCACAACCTCGACCAGAGAGGTCTTCGACTGACATTCTTGCCCAGCT
ACGATCGGAGGGAGTGCTACCCGGTCTGAAACAGCGCGACAATGCCGTCG
CCTTCCAAGTACCGGCCGAGAACCCCGACACTCCTCCCCGCTACCACATG
AGGCTGAAGAAACTCGAGAAGAGGATGGAGGAACGGCGTGAGAAGGTGAA
GAAGCCATGCGCGGAATCTGCTGATGATCTGAAGAGGCAGCTTAGCGACG
CGGAGGTTAGGAGACAGGAGCAGCTAGCCAAGAAGAGTGCCAGGATTTCC
ACAGAGTCCGCGGAGAAAGCAGCGAAAATCAAGGCCAAGAAGGCGGCCAG
GAAGACGAGCAGCACCGCTTTCTTCGTCACCTCCACTAGCGACGCTGACA
TCGTCGCTACCCGGGAATCCCAGAGGAACAAACGGATGGAGAGACGCCTG
ACTGAGAGAAGAGCGCGTGTGAGTAAGACAGCGACAGCAGAGGAGCTGGA
AACGCGTCAGAACCTCGCCGCAAAACGCCGCAAGGAAAACGTGGTAGCTA
CCGTCTCCAAGGCTGAGAAGCTCGCCCGTCCCCACACGATCAGCCCCGCC
CAGCAGGAGCCAGACTGTGCCGGCAACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01421.1Blg01421.1-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01421.1-exon-Sc0000046-1570713199:248262..248482Blg01421.1-exon-Sc0000046-1570713199:248262..248482Branchiostoma lanceolatumexon
Blg01421.1-exon-Sc0000046-1570713199:241038..241109Blg01421.1-exon-Sc0000046-1570713199:241038..241109Branchiostoma lanceolatumexon
Blg01421.1-exon-Sc0000046-1570713199:239443..239709Blg01421.1-exon-Sc0000046-1570713199:239443..239709Branchiostoma lanceolatumexon
Blg01421.1-exon-Sc0000046-1570713199:238546..238641Blg01421.1-exon-Sc0000046-1570713199:238546..238641Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000046genomeSc0000046:238546..248482 -
Properties
Property NameValue
GeneIDBlg01421