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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000046:975039..978883+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01498.1 ID=Blg01498.1|Name=Blg01498.1|organism=Branchiostoma lanceolatum|type=mRNA|length=3845bp|location=Sequence derived from alignment at Sc0000046:975039..978883+ (Branchiostoma lanceolatum)
AAGCTTCTGCGGAATTTTCCATCACTAGTTAGCACGCTAGCAGACGACAC
TCTGCGTCACGACCAACATTTTTCTATCGTCAGATAGCAGACAGTACTAA
CGTTACCAGGTAAAAAGTGCTTTAATATCCCGAATTCCTTTCATACATTG
TTATCTTACGTATAAAGATATCTTTGGTAATTGAGAACTCTAAATATTTT
GTGTCGGCTTTCGTTTAGTAAACACATTTGAAAATGCCCGCTCTGTAATA
TTCCATTCACGGGACCGCAGGCAGGTCTAGACCGGCGTCGTAGTGTTTTC
GGAATAAAATTACCGTTCTCCCTTAAAAACAACCGCCACCCAGAAAATCT
TTACATTTCCAGTAAGTAATAGTTACTTGACATTTAATTGATGAATACAT
TGATAAATTTGATTTCTTTTTGTGGTCACGTTTCATATGTGCGTATTACA
TTTTGTTGTTTTCATAACTAGCACGTTCGCCCGCTGCAGACGACGGAATT
TTCCATTCACGTGACAAGTGACCGCAGGCAAGTGCTGTACCATCGTTTTT
GGAATAAACCCCCAATCCGAAGACACTTTTGGGCCTTACCCTGGAATTTG
TTTACATTTTAAGTAAATAATGGTTACCTTTTATTAAATAAAGAAATAAA
TAAAATATATTTCTTTTCGTGGTCACATTTCGTATGTTACGTTTTGTTGT
GTTCCAGCATGTTAGAAACATTTAAATCGGCGGGTACAANAATCAGCAAA
GTTGGAAATTTCTATCGACCACTAATATTTTCTGTTTGTCGGACTTTGTA
CGTTGTATATTAAATTAAAAGAACCCTAGAGTGGAGTAGAGTATACTAAG
AGTAGAGTCTTCGGCCAACTACGCTCTCCTCTAAAAACTAACTCAAGAAC
CAATGGTTCAGTAACATTGACTTCGTAAGATAGCGGACAACTTGATCAGG
TAAGAATTTGCTCGGCACTCTATGTTGTTTACGTATCGTAGTTATAGCAG
ACATTTTATTTCTTTACATGCAAGACTTTAGTAGCTATGAAATTGGTCTT
CCGTATCATTTCTGTTTCATGATGGTTATAAACTGGAGATTTATTTTGTT
TTCATGGTGACGTCTTCCTGTGTTCCTCAGATTTTTTGGGGGGAGGGGGG
CTACTTTGACAAACTGCCACACAAGCCACCACATTTTCAAGGACATAGAG
AATGAACATGAAAATATTCTAAAATGCATAATTGTTGTGGATACATGTAC
TTTGTTATATTTAGTATGCAAGGAGCTTAGTTGGAAACTAGAATTTTCGG
AGAGGTTCTAAACTTTTACCATGTGTATACAGTGTATGCAGAATGTATAT
TCTGGTACTTTCATTTTTTTTAGCAGAAATGCCAAGACGCAAGAGTAAAA
AACCAATGAAGAGGTTGAATGAGTGGAAGGCAAAGCAGCAAATTAAGGAT
CGGGTTGACAAGCATGAATTACACATACGAGGACAGAAACCGGCTGTTGA
GCAGGTATTGGAGGTAAGAGGCGAGGATCTGGCCAACGAGCAGGTATTGG
AGGTAAGAGGCGAGGATCTGGCCAACGAGCAGGTATTGGAGGTAAGAGGC
GAGGATCTGGCCAACGAGCAGGTATTGGAGGTAAGAGGCGAGGATCTGGC
CAACGAGCAGGTATTGGAGGTAAGAGGCGAGGATCTGGCCAACGAGCAGG
TATTGGAGGTAAGAGGCGAGGATCTGGCCAACGAGCAGGTATTGGAGGTA
AGAGGCGAGGATCTGGCCAACGAGCAGGTATTGGAGGTAAGAGGCGAGGA
TCTGGCCAACGAGCAGGTATTGGAGGTAAGAGGCGAGGATCTGGCCAACG
AGCAGGTATTGGAGGTAAGAGGCGAGGATCTGGCCAACGAGCAGGTATTG
GAGGTAAGAGGCGAGGATCTGGCCAACGAGCAGGTATTGGAGGTAAGAGG
CGAGGATCTGGCCAACGAGCAGGTATTGGGGGTAAGAGGCGAGGAGCCAG
TTGATGAGCACCCATTACTAGAGGTAAGAGTGGAGGACCCAGCTGGTAGG
CAGGAATTAGAGGTAAGAGGGGAGGAGCCGGTTGATGAGCATCAATTCGA
GGTAACAATTGAGTCGAGGGTTGGAGAGTTTAGGTTCAAGACCTTCACAG
AAAATGATCAATTGCATGCAACTTGCAGATCAGTTGAACCTTCCTGTTGA
AAGATACCTCAATATTGAACAAATGGATGTCCCCTTGGATTCCAAACCAC
CGATCAATCCCATGGGGAACGACTAAGGGTCCCGCTCTGGCTCTTGCCAA
AATGACCTGGCAAGGGGGAGCCTGGTGGGTGCTCCATAACTGGGAGCCAG
TGAATGATATTTATACCAGCGTCCGCCCTTGCCACCCGGCACATTTCGTG
GTGGCAAGGGGGATGGGGAAGGACTAAGGGTCCCGCACTGGCTCTTGCCA
AAATGACCTGACAAGGGGGAGCCTGGTAAGTGGAAGCCTGTGAATGGCAT
ATTTGTGCCAGCTTCCCACCTTGCCACCGGGCACATTCAGTGGGGGATGG
GAGCATTGGGAATATCTGCTTAAGGGGGAGCTTGGTGGATGTTTCATGAT
TGGAAGCCTTGTAGATTAAGAATCATTCGTGTCAATACTTTATTGTTACT
GCCAATTTGTCATTTGCATTGATTTTGTTTTTAGAGTGTTATAACAAATC
TCAGGTCATTTGGCTTTATTTTCCTTATAGTATTTGTAAATGTTTTCATA
TTCCTTTCATTGTCATATTTCGTATCATTTTCCCATTGAAAACCATTTTG
AGAGATGTCCAGTAATGTATGCAAGAATGAATGAAGTGTCTCTGTTTCTT
TTCAGATGATAAGGGCCAGTTGAAAGATTATGCTCGTGGCACACAAAAGG
TAGGGCCTGTTTCTTCTGTCACTACACGTATATGTAGATGTAGAGACAGG
TCTGGCATGGACATCGAAAAGAAGATTATCTCCAAACACAACTAAATGTT
AAGTACTGTTTTCTTCTGACAACAGACAATATGTACAGTTTCCAAATCAA
TGTAATTTTCTAATCATATTTTGCCCATACTATAAGTATGGTCAAAATAT
ATTGTTGATGAATGTTTCTACTCTGCATTGTGATGCTAAATCTTGCGCTC
CTGTTTGTGTTCTCTAGATGAGACCTCCTGTAGAGAAGCAGAACCTGGTC
CGCGATAAACCACATTTGGAGGAAGCAGACAAATCTGGCCCCAGCCAGCC
ACACAAGATTGTAAGTAATTCTGGAATCATGCATGTTTATTCGGACACAT
GAACAGATTCCATATCCGTCTATAGTTTTTTTTTTATCAGTGTTTCAGCT
CTGTATTGAAATGCTAAATCTCACTCTTCTGTTTCTATCCTCCAGACCCC
AGGTACAATGTAAGGCAAAATACTGCTGGCTACTTGTTCTAATCAAGTAC
AAACTGCAGCAAGGTTCCAGACTATACAATGTTGTTAATGGTAGACAGTA
TCATCTTGCTACTTACATTGTATACTGAATCTCCAAATGAAAGTCTGCTT
TTATTTTTGACTATTTTCAAGTTTCTTAAAGATTCTTATTGTTTGCCGCC
AGCTTGACAGAAAATCGCCCTTAAGGCGCTCCTTGAATATGTTTCTGAAA
TATTTTGCATCGACTGTTCAGTATCCATGAGAAACTGCCTGTTGAAGAAG
CAGGCAGACCTGGCCCCTGCCAGCCAGAAAAGGATATACTACCAATAGAT
CACACCCAATTCCGAAAACATGTATATTTGGACGTCATGAATGTATATTT
TCTGCGATGTAATATTCAATATTTACAGCTTACAAGATTTTTGTG Coding sequence (CDS) from alignment at Sc0000046:975039..978883+ >Blg01498.1 ID=Blg01498.1|Name=Blg01498.1|organism=Branchiostoma lanceolatum|type=CDS|length=822bp|location=Sequence derived from alignment at Sc0000046:975039..978883+ (Branchiostoma lanceolatum)
ATGCCAAGACGCAAGAGTAAAAAACCAATGAAGAGGTTGAATGAGTGGAA
GGCAAAGCAGCAAATTAAGGATCGGGTTGACAAGCATGAATTACACATAC
GAGGACAGAAACCGGCTGTTGAGCAGGTATTGGAGGTAAGAGGCGAGGAT
CTGGCCAACGAGCAGGTATTGGAGGTAAGAGGCGAGGATCTGGCCAACGA
GCAGGTATTGGAGGTAAGAGGCGAGGATCTGGCCAACGAGCAGGTATTGG
AGGTAAGAGGCGAGGATCTGGCCAACGAGCAGGTATTGGAGGTAAGAGGC
GAGGATCTGGCCAACGAGCAGGTATTGGAGGTAAGAGGCGAGGATCTGGC
CAACGAGCAGGTATTGGAGGTAAGAGGCGAGGATCTGGCCAACGAGCAGG
TATTGGAGGTAAGAGGCGAGGATCTGGCCAACGAGCAGGTATTGGAGGTA
AGAGGCGAGGATCTGGCCAACGAGCAGGTATTGGAGGTAAGAGGCGAGGA
TCTGGCCAACGAGCAGGTATTGGAGGTAAGAGGCGAGGATCTGGCCAACG
AGCAGGTATTGGAGGTAAGAGGCGAGGATCTGGCCAACGAGCAGGTATTG
GGGGTAAGAGGCGAGGAGCCAGTTGATGAGCACCCATTACTAGAGGTAAG
AGTGGAGGACCCAGCTGGTAGGCAGGAATTAGAGGTAAGAGGGGAGGAGC
CGGTTGATGAGCATCAATTCGAGGTAACAATTGAGTCGAGGGTTGGAGAG
TTTAGGTTCAAGACCTTCACAGAAAATGATCAATTGCATGCAACTTGCAG
ATCAGTTGAACCTTCCTGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01498.1-exon-Sc0000046-1570713199:975039..975147 | Blg01498.1-exon-Sc0000046-1570713199:975039..975147 | Branchiostoma lanceolatum | exon |
| Blg01498.1-exon-Sc0000046-1570713199:975510..975565 | Blg01498.1-exon-Sc0000046-1570713199:975510..975565 | Branchiostoma lanceolatum | exon |
| Blg01498.1-exon-Sc0000046-1570713199:976415..977937 | Blg01498.1-exon-Sc0000046-1570713199:976415..977937 | Branchiostoma lanceolatum | exon |
| Blg01498.1-exon-Sc0000046-1570713199:978206..978298 | Blg01498.1-exon-Sc0000046-1570713199:978206..978298 | Branchiostoma lanceolatum | exon |
| Blg01498.1-exon-Sc0000046-1570713199:978434..978883 | Blg01498.1-exon-Sc0000046-1570713199:978434..978883 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000046 | genome | Sc0000046:975039..978883 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01498 |
|
