Blg01525.0 (mRNA) - B. lanceolatum

Overview
NameBlg01525.0
Unique NameBlg01525.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0001500:625..5133-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01525.0 ID=Blg01525.0|Name=Blg01525.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4509bp|location=Sequence derived from alignment at Sc0001500:625..5133- (Branchiostoma lanceolatum)
GTGCCCGACAAAAGACTCACCATGGGAGTTCCCGACTGAAGTAACTAATT AAACAAGTGTTATACTAAGTACGTGTCAAATGTAACATGAAACTACCGCT TATTTTTGTTTCACCCAAGTACAGATCTAATTGACAAAACGGAAAGTGTT TATACATACCCATACGTCCATACGGTGCCCCGCCTACTGGCGCTAATTAA TTTATCTTCCTAATGCCCTTCTCTGATTGGACTGAATCGCCATTTGATGT TTAATAATCGGATTACCAGCCAATCGTTGCCATCAATGCATAATCGTTCG TCTGCTTCAGTTTGACAGCTCGTGTATGCTTCCTTATTCTTTTCAACGAG TTCCCCTCCCCCGAGTTAGTTACGAACTACAACTACTTGAGCCGTCATTG TTTGGCCTTACTACAGTGACGTCCCCCTGTCTGTGAAAGACTCCTGTTTC CTCTCGGCGTTGTTAACCACCACCAAGTGGTCTGCAGTCTCAGTCAACCG ACTGATAATCTTCGTGAAAAATTTACGATCGTCGAATATCCCGCTGTACG ATCTGGGGACCACCGGACAGAGTGGCGCACGCCTGCGGCACGGTAGCATG ACTTCTGCCGTAAGAAGGGACCTCTTCCGTCCGATCGAGCAGCTCTCGAT GGCTCATCCCCAGCCACCTGCCGCCAGCCCCCCTAAGCCCCTCACCTCCT TCCGTATCGACGACATCCTCGGCTCCAAACCTCTTCCTCGGAAGAAAGAA GTTTCCTGCGAGCCCAAACCTGCCACGAGTGTTACAGTAAACGGGGCGAA GAAGAAACATGTGGGGTCGGCTAGCCCCTCGGACTCGTCCTCCCTCCCAG TGTCTATGAACTCTCCGTTGAGTGCCCTGGAGGAGCTGACCAACAAAACT TTCCAGGGACTGGAGTCCAGCGTCCTTCGGGCAGCAGAAGGTAAGCACGC CGCAGGCCCCATAGCTAACAAGCCGGTAGGGATGCGCGAACAACGAGCCA AGCCACATTCTCCACATGGCCAACGTGCCTGACAAGGCTAGCCAGAAGCA GAGCTATCGCATACATGTAGGGCCTTGACTTCTCCGCCCGAGGTTGTGCA GGCTAGAGATATGGGTCAATCCGCCTGATATGCAACTACAAAACTCTTCA TTAGCGGTGAGCATGAGATGACAAGTAAGCTAGTATCTCAAGGCCTCTCA AGTGGTCCCGTTACTAACAAAGTGACAACAAAACGTGCGCTAGTGGCTCG GCAAGTACTGCCAAAAGAACGTGGAAAAACAACAGGTCGGGCGTAAACTT TGGATATAGATTGTCAATTCGAAGAAAAACCAGAAATACTGGATAAGCAA ATGATTTGAGTTGTTTGTTGTTATTTCCTGGTGGTTGTTTGGAATGGGAA ATTCAAGATTGTCTTCGGATGTGTCGCGCAGAAAATGGCAAAGTTTGGGG AAGTTGAAAGCACCTTAAAACGCAGAGGATTGAATTAGACCAAAACAAAA GAAAGAAAAACAATAGATTGTATGGTTTCAGCTGCTTGGGTGAATGAGTG TCTAATGGCTTCCCGTGGTTTGTGGTCTATGAATATTTTGACAATGAGTC GCGTTAAAGGACCTGGCATTTCTGCAGTTCCCACGCTTGTAAAAACCACA CGGGTAGTTTCGTCTTAGAACATGCCCCGTAATTTGTAGGAATTTATTCA TCACAACAAATACAGAAACTAATCTGGTACCAAGAATAGTCGTGACGGTG TATTTGAAACTAACAGTTCTAGGTGGTCAAATGGATACCTAGTCTATCTC ACAATAATTTGTGTCCAGAATTTTAGTTCAGTGTTCAGTTGATAATGACA GAGAAATTATGCGGTTGCGAATAAAACCACTTCCGGATTTTACAGTCGTT GATTCTTGATAACATTGTTGGTTTAATACAATAGTTGTTGTCCATGAGAA GGTAGATGTTTGGAGAATGGGTTGCGGATTTCCTGATGTCGGAAATGCCT GATGAATTTCGCAGGAACTTCTTGGTACAGAGCTGTCAATCAAATGTTTG TGTTACTATCACTATCATGGCGCTCGTCTACAGTGGACAGGACAGAAATT CAGAAGGACAATAGCACAGATAGACCCACACCTTTCGTCGTCCCTTTCTG CACGTATCCTAAATGTCCTATTGCAAGTAGGCTATGTGATATCCAGAAAG AAAAATACTTCTCCATTTCACGTGTCAGCCGTTTTGACAGACGTTTATAG ATAATTCGGCACAGATGTTCTTGATACAAGTTTTCGTCACGGAATCGTCG TCTCCGTATTCTTGGCTAGGCTTGTGAAATATGACAAGTTATAGTAAGTG TTATAGTTTCCACATGCTAAGATATATGGCTATTACGCATTTGGTATTGT TCACATCGTTTAACCTTACAAATGGATGGTTTGTTGTCCTAGTTCACCTA TGTTAAATCATGAAACTGATCATATGTATTTTCTTCCTTCCTATAGCGGC TACCTCGAATCGTGACAACATGGGCCTGTTCAGTAACAGACAACCTCCCA AGAAGCGACGAAAATCGCGCACCGCCTTCACCAACCACCAGATCTACGAG CTGGAGAAGCGCTTCCTGTACCAAAAGTATCTCTCGCCGGCCGACAGGGA CCAGATCGCCCAAAGCCTAGGTCTGACCAACGCACAGGTCATCACATGGT TTCAGAACAGGAGAGCCAAGCTCAAGAGAGACCTAGACGAACTGAAGGCG GACATGAGCGCCGCAAAGTTGCTGAAGAAAAAGGGAATCCCACCAGAGCT GGTACTAAGAGACGCCAATGGCGACATAATAACAAATGGGAACCGGCAGA ACGTAGAAGAAGAAGAAGAGGAGGAGGAGGAAGAGGAAGAAGATGACGAG GACCAGGAAATCGACCTCGAGGTAATAGATGACGACGAGGAAGATTGCAG GATGGAGGGAATAGAAGATGAAGAACAAAAGAAGGAGAGAAACAAAGACA CTTCCGTGAACACTAGTCCTAGTTCGGACTCAATTCACGAACAGGCCAAA GACACGTCAGAAACAGCGGCTGCTGCAGCCGAGATCGCTTCACAAGGCAG CCCGTCCGGCCAGGAGGCAAGCTAAGTAGTGCTACCGTTGTATGTTTTGT ACATATGGACTCTATCGTACGTGGTGACAAGGAAAAAGAACGGACGATCT GAACATCTGAGGTCAGACTCTAGCTCTGTACAGTTTATATACAGGAAAGA AGATATAGCTAGTTGCCCCGTCACGATCTGTCTTGATCATTATTGTTGCA GACATGGGGGAAATGTCAGACGCTCGCTGCTTTTCTGGTCATCTCTTACG AGGTGGTCTTGACCATACTTCCCCCCTAACATGTACACACCCCGGGACGC CCTCTCGATTTAAACAACCGACGGCTTACCCAGCCCGATTTTCCACTTTT GGGGGCCCTGTCTGTCGATTTTCTGCTCCCTTTGAAAGCCCCAGTCACCA TGTGGTTGACGTGTCGTTCCGTAGGGGAGGGGAACTCAGTGCAGACCGCC TGGACAACAATACAAAAGCTTAAGTTTTCAATATTGTTTTCTATTGTCTT CCATTTGGCGGATAAGTGGTTCATAATCATGCAAAATGCCGTTGCATTTT TCCCTTCTCCCCTGCCCAACGCAACAACTATCGGAAGAGATGAGCAGAAG AAATGATCATCAGAACGTGTTGAAATCCCCCTAATTATTACCTTTGCTTA TGTTCCACGTTACCAGATTACTGGGATTTGTTCGGTGTTACAAAAGGATT AGAATTTTCCGCATTTCTTACGCGCTCACCCCCTCGACTTAACGCACTAA CTTGCCATCTGTTCCAAAATGGGATCATGCTGAGATTTGGTCGCTTTTAA TTCATTGCTACTTTTAGCTTTTCTATGATCTGAACTGCAGACCCCGATAC CAACAGAAGAGAGACTATTTGCCCGGTGTGTGTATTGTGTAGCTGTGTTT TCATTACGGGCGTTTATTTCTGTACACATTGTCTATTGGATTAACAAACA GAGGTAGCCTTTATTTTTGGAAATCCGCTAAGCTGATATAGGACGTTTGT TCAGCCAATTTAGGGGAGGAGGGGAACACGCTACGCTCGCCAACACCACA GGATATTTATTTGTCTAAGACTTAGCAAATCGTCTCCGTCTGACAGAGTA TTTGAACTATTCAGGGACACAGCAGTAACTTGCAGGCCTGCCTTCTGCGA CAAAGCGAGAAATACCGTGTTCTACATTACTGCACTGTAACAGTATGTGT ACTACAACTCGTGTTGGTGTCGAATTAAAATCTCTGTTGTTGAATTTTGT AAACCACGGCTTTGTTTTGCATTGTTTTTGTTCTCCTCACTTTAGAGAGA TAAAAGGGATCGTGAACGGTTGGACAAATAAGGGTATAATTTAGGTTTTT CAATTATGGTTCTATTTTCTTTGTTTGCTTGGGAAAACGAATGATTGTGT GTAGTCACC

Coding sequence (CDS) from alignment at Sc0001500:625..5133-

>Blg01525.0 ID=Blg01525.0|Name=Blg01525.0|organism=Branchiostoma lanceolatum|type=CDS|length=972bp|location=Sequence derived from alignment at Sc0001500:625..5133- (Branchiostoma lanceolatum)
ATGACTTCTGCCGTAAGAAGGGACCTCTTCCGTCCGATCGAGCAGCTCTC
GATGGCTCATCCCCAGCCACCTGCCGCCAGCCCCCCTAAGCCCCTCACCT
CCTTCCGTATCGACGACATCCTCGGCTCCAAACCTCTTCCTCGGAAGAAA
GAAGTTTCCTGCGAGCCCAAACCTGCCACGAGTGTTACAGTAAACGGGGC
GAAGAAGAAACATGTGGGGTCGGCTAGCCCCTCGGACTCGTCCTCCCTCC
CAGTGTCTATGAACTCTCCGTTGAGTGCCCTGGAGGAGCTGACCAACAAA
ACTTTCCAGGGACTGGAGTCCAGCGTCCTTCGGGCAGCAGAAGCGGCTAC
CTCGAATCGTGACAACATGGGCCTGTTCAGTAACAGACAACCTCCCAAGA
AGCGACGAAAATCGCGCACCGCCTTCACCAACCACCAGATCTACGAGCTG
GAGAAGCGCTTCCTGTACCAAAAGTATCTCTCGCCGGCCGACAGGGACCA
GATCGCCCAAAGCCTAGGTCTGACCAACGCACAGGTCATCACATGGTTTC
AGAACAGGAGAGCCAAGCTCAAGAGAGACCTAGACGAACTGAAGGCGGAC
ATGAGCGCCGCAAAGTTGCTGAAGAAAAAGGGAATCCCACCAGAGCTGGT
ACTAAGAGACGCCAATGGCGACATAATAACAAATGGGAACCGGCAGAACG
TAGAAGAAGAAGAAGAGGAGGAGGAGGAAGAGGAAGAAGATGACGAGGAC
CAGGAAATCGACCTCGAGGTAATAGATGACGACGAGGAAGATTGCAGGAT
GGAGGGAATAGAAGATGAAGAACAAAAGAAGGAGAGAAACAAAGACACTT
CCGTGAACACTAGTCCTAGTTCGGACTCAATTCACGAACAGGCCAAAGAC
ACGTCAGAAACAGCGGCTGCTGCAGCCGAGATCGCTTCACAAGGCAGCCC
GTCCGGCCAGGAGGCAAGCTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01525.0-exon-Sc0001500-1570713199:4194..5133Blg01525.0-exon-Sc0001500-1570713199:4194..5133Branchiostoma lanceolatumexon
Blg01525.0-exon-Sc0001500-1570713199:625..2637Blg01525.0-exon-Sc0001500-1570713199:625..2637Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01525.0Blg01525.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0001500genomeSc0001500:625..5133 -
Properties
Property NameValue
GeneIDBlg01525