Blg01539.0 (mRNA) - B. lanceolatum

Overview
NameBlg01539.0
Unique NameBlg01539.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000256:362445..364470+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01539.0 ID=Blg01539.0|Name=Blg01539.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2026bp|location=Sequence derived from alignment at Sc0000256:362445..364470+ (Branchiostoma lanceolatum)
ATGGTACCCGAATCCATTACTTTAGCCGCTGCCGTGTCAGACTTCTACAT TCCACACAACGAGCTTGTAAGTAGGGCCTTAAGTTTGAAAAGTTAACAGA AATTATGCCCTTACTAGTAGGAGAGGCACTGATTTCCTCACTTCATTAAA TTAAAAATGAGTACCCAGCTTTGGTTAGGGAAGTCTTTTGCTTAGGACGT TAGATGAAGGTCTGGTGTTTGAGGAGAGCCACATCTTGAGCATGTTAAAG AACCTACTTACACTTATCAAAAAGAGTAGGCGTCCTTCCTGGTGTGAGAG ATTTTGGAAACGGTCAGACGTTTCAAGTAGCATCCACTACTTTTCATTAG AGACTCTGAGGAAGATTTGTCGAACAGCAGGTTTGAACCACAAAGTAGGA ATTGATACGCAAATATATGCTCCTATTGTTTTGATATAGGAGCTAAAGCT GGTTCGTGGGCAAGGCTGGGGCCCAAGTGCCAGACAGTTTGATTCGCAGC CCTCCTTTCCTGTTGAGGGTTGGATTGTACATCTTCTCATCATTCGACAT ATATCTTGCTCAGAGTCACTGACGAAAAGTAGTGGATGCTACTTGAAACG TCTGACCGTTTCCAAAATCATGTCCAGTTGCTTGAGTAACTGATATTTGG CATATAGTATTACCTAGATATCTAACCTTCATCGACGTATAATGAACTCT TGTTTCCTCCTACAGCCGGAGCACAAGATCCAGTCAGCCAATGGTCCTCT ACAGATCACCATGCAGATGACACCCAAGATGCTGTCCCCCCTGGTTAAGG AGTGGGCACCTCAAGCCTTTACCGTCTCCTTTAAGGTATGTGTATTTATT TTGTATTCATTGCAAATAAGACAATTCATTACCAAACAATTCAATATTTT GTGGCGTCGTGTGGCGTAACAACAGGGTTTTCGGTCCAGAACCCAGCGGT TCCGGGCTCAAATCCCCTGGCGCCACCGATGTTGTGCCCTTAAGAAAAGG CACTTGACATGACTTTCTTCACTCCACTTCAACATTCTCCTTAACTGACT TAGCTTCAGTCAGTTGAAGGTCTCTCACTCTCTCTGACTTGCTCACTGTC TCTCTCTCTCTCTCTCAATCTTTTGATCTTGTGTGTACATTTTACGCTGA AAGCTCAGTCACAATAGATACAATTTGTAGCTACAACTGCTATCAAACTC ATAGGTGTTTCTTATGTTTTTACACAGCTGGAGACTGACACCAGTATTCT CATCGAAAAGGCAAAACAAGCTCTGACGAAGTACAGTCATCAGGTACGAA ACCTACAGGAAAATTTTAAGTTTATTTTTGATAAATGACTATTGATCAAC AAAGTTCTTTGCACGCAATTGTGACATATTCATCTGCCAATGTTTCAGAA TTCTGACTGGTTCTGTTAGGTTGCACTGCAGTGGTTATGATGGGGTCCAA AATGTGACTAAGCTTGTATCCCCCCTCATCATCAGAGCTTTGAGATTTGT TCAAAAATTTGTATTTTCCTAGAACTATTGTACAGTGGAATTTGTTATCA CCAAGTACAGTAGGGGCATCTTCACTGGATAGCTTTAAAGTACGCTGGCA GCAAGATGTGCAAAAATAAGGTATGACAGGTCGTTCAGTGTGATATAACC AGCTGCTACCGTGCTGCGTGCCTGTGTGTGCTACCCATACAGAAGGGCAG TTATACTAGTACAACTACTATTCAGATACAAATACTTTCACAAATCATGA TATCAATGTATGCAACTTTCTATATGTGAGAGGATTACACAATGTATTGG GATGAGTACTACACTTCTTAAATCTAACAATTTTTCAGGTTGTCATCGCC AACATCCTCGAAACGAGAAAGAAGACCGTAACCATAGTAACCAGAGACGC GGAGGAGGTGGTACTGATGTCAGACTCCGAGCTTGATGCGGGGATGGAGA TAGAGGAGAAAATCATTGCAGACCTTGTCAGGAGACACCAGAAATTCTGT CAGGGATCGTGAGCAACTTCATAGAG

Coding sequence (CDS) from alignment at Sc0000256:362445..364470+

>Blg01539.0 ID=Blg01539.0|Name=Blg01539.0|organism=Branchiostoma lanceolatum|type=CDS|length=426bp|location=Sequence derived from alignment at Sc0000256:362445..364470+ (Branchiostoma lanceolatum)
ATGGTACCCGAATCCATTACTTTAGCCGCTGCCGTGTCAGACTTCTACAT
TCCACACAACGAGCTTCCGGAGCACAAGATCCAGTCAGCCAATGGTCCTC
TACAGATCACCATGCAGATGACACCCAAGATGCTGTCCCCCCTGGTTAAG
GAGTGGGCACCTCAAGCCTTTACCGTCTCCTTTAAGCTGGAGACTGACAC
CAGTATTCTCATCGAAAAGGCAAAACAAGCTCTGACGAAGTACAGTCATC
AGGTTGTCATCGCCAACATCCTCGAAACGAGAAAGAAGACCGTAACCATA
GTAACCAGAGACGCGGAGGAGGTGGTACTGATGTCAGACTCCGAGCTTGA
TGCGGGGATGGAGATAGAGGAGAAAATCATTGCAGACCTTGTCAGGAGAC
ACCAGAAATTCTGTCAGGGATCGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01539.0Blg01539.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01539.0-exon-Sc0000256-1570713199:362445..362510Blg01539.0-exon-Sc0000256-1570713199:362445..362510Branchiostoma lanceolatumexon
Blg01539.0-exon-Sc0000256-1570713199:363160..363279Blg01539.0-exon-Sc0000256-1570713199:363160..363279Branchiostoma lanceolatumexon
Blg01539.0-exon-Sc0000256-1570713199:363672..363737Blg01539.0-exon-Sc0000256-1570713199:363672..363737Branchiostoma lanceolatumexon
Blg01539.0-exon-Sc0000256-1570713199:364283..364470Blg01539.0-exon-Sc0000256-1570713199:364283..364470Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000256genomeSc0000256:362445..364470 +
Properties
Property NameValue
GeneIDBlg01539