Blg01607.0 (mRNA) - B. lanceolatum

Overview
NameBlg01607.0
Unique NameBlg01607.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000381:122355..124851+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01607.0 ID=Blg01607.0|Name=Blg01607.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2497bp|location=Sequence derived from alignment at Sc0000381:122355..124851+ (Branchiostoma lanceolatum)
ATGGCCAAGCTTGGTCTAGGCTTGGCTGTTGCCGTTGCGTTTGCCATTTG TCTTGTTGTCTCCTCTCAATCATTGTCCGGTAAGAAACGTTTTATGTACT TTATAACTGTACCTGAGTTTGATTTTTGTGTGTATTTACTAGTGGCGCTA ATATGTACATGTTAAAGGCAGTAGGAGGCCTCTATAATTTGACCCACCAT GTGTTAAGCAGTTTAGAATGACATTAATTCAACGAGTGCTTATGTCTCAA TTTTGGCATGCTTCAAGCGAGTTAAATCTGCACTTACTTGATCTGTTTTT GCATTATTTCTAGCATCAGTTGGCTACAAGAAACGATCTCGGTATATATA GATCAACCTCCAGATACGTTTGGCTCCGATTCCACAGAGCGTAACTAACG TCCAAGCACCCATTTCTTGTTTTATGTCATATGAAGGGTGGATACATTCC AAATTATATGACAAATATGATCTAAAACGAGGTCAAAATCATCAACACTC TGGTCGACTCATGCTCAAAACTATTCAATTTCAACTACTTGATGGCACTT TATATGTGACGTAAAATGTAGCATGGATACATTAGAAACATCACAAATCT GACCTAAGAATTATCAACGTTATTTCATGCTCAAACCTACATTGTAAAGA AGAAATGATGCTTTTGGAAACTGTTGATAAATCAGAAGTTGACATTCTCT CTACAGGGTGTACAAAGCAAGGCTACGTGCGTTTTAAAGGAGTTTGCTAC AAGTACTTTGATGAGGAGAAGGAGTACGATGATGCCCGACAGACGTGTGC CGCAGACGGGGGAATGTTGGCCATGCCGAAGGACAGTGAGACCAACGATT TTATCGCCGTACTGGGAAACGGAGCGCGCTGGATTGGGCTGACTGACATC AACAGAGAAGGCCAGTGGGTGTTTGAGGACGGACAAACCCTGGAGTCAAC CGGCTTTTCCAACTGGGACAATGGGAGATTGAATGAACCGGATGGTGACA CTGGTGAAAACTGTGCAGCCTTCTCGTCGACAACTGGGTCCCCGTGGGTT GATCTGAGGTGCAACTCCGATCGAAAATTCATCTGTCAGACAGATCCAGG TATGCATTGTAACAATCACTAACGTATCATCATTACGAATAGAACCATTG CAACATTATTCTTATTTAGTAAGTTGTCATTCATTGCCTCCATCTCATAT TTGCCTACTGAAATTTACCTTATATCCTAAATGGAGGGTGGAGTTGAGCT ATCATCTTCCTTAAGGTCTCCCTTATGTTATCTCTTTGTTGCATATCTTT TCATAGGTATCAGCTTTCATTTGCTCTTTTCTCTTTTTCTTATCCTTTCC CTCAATCCATATGTAGGGTTGAAGTTTCGAATGGCTGAGGCAACCAACAA TGTCAATACATGTGTAACATTATCCCCCGCCTCTCTGATAGCTACAGTAT CTGTACGCCAACGTTATGATTATCATTAATTATCATCATTATCTTAAAGA AAGAAAGCCATATTGCTGCATTATTCCTCGTGATAAGCATGCAATGTCGT CTTTCCTTTTTCTAAAGTTTTATCTTCTTTCCCTTTCTAAAGCTCCTATT TCATTCGGCCCGCGGCATGCATATGGTGGCGACCTCGCCGCGACCGAGTG ATTTGACAGAGTGCTCAACGAATTTCATCGACAAAACGAATCTTTTTACG CTTTGTGTGTTTTATTATCTTGTTAGTCATACTTGTACGTTATGCGCGAT ATACCCATTATAAAAGTTACGGCTAGGGTTAAACAAATCCAATTGAGGAC GCAGCAACGCTGTCAACGTGCCTTGAAGAGACAGGATACAACTTTTTATG TTTCACTCCTAGTACTACAAATATGGATGAAATGTAGTTTTTCCTGGCGT TATTGCTCCTCCTTCTCTCAAATATTCAAATATATTTATCTCGAGCTCAG TCATTTTTTGGGCCTGAAATTTGGCACAAGCGTAGAGTGGGCCAACACTC TTAGGCATCCAAGCGTCCAAGAAAAATACAGCTAGCATAGCTAGTCCACA GTGGTTTTCGGTTTCACCGATTGCTACTAGTCCAACCCCAGGAGTGTACA CAGAAGTGTAGGACGAGACGAAGACCGTTCGGACAAAAATGTTTTCCATG CGTGCGTTACAAACCATGTTAACAACATTTGTATGACTAATTGACGTCAT CGTTTTCTTTTTCCCCCCAATTGCAGCTCAAAAAACAACAGCTGCACCTT CATCCACTGCTCTCACTACAAGAAGAACTACTACTACTGCTGCAACTACT GCTGCTGCTACCACAACTGCAGCTACCACAGTTGCCCCTACTACTACTGC AAGTACTACTACTGCAGCTACTACCCCTGCAGCTGCTACTACTGCCAAAA CTACTGCTGCAACTACTACTGCCGACACTACTGCAACTACTGCTACTGCT GCAGCTACTGCTTCTGCTACTACTACTGCTGCACCTACTACTGTTGA

Coding sequence (CDS) from alignment at Sc0000381:122355..124851+

>Blg01607.0 ID=Blg01607.0|Name=Blg01607.0|organism=Branchiostoma lanceolatum|type=CDS|length=558bp|location=Sequence derived from alignment at Sc0000381:122355..124851+ (Branchiostoma lanceolatum)
ATGGCCAAGCTTGGTCTAGGCTTGGCTGTTGCCGTTGCGTTTGCCATTTG
TCTTGTTGTCTCCTCTCAATCATTGTCCGGGTGTACAAAGCAAGGCTACG
TGCGTTTTAAAGGAGTTTGCTACAAGTACTTTGATGAGGAGAAGGAGTAC
GATGATGCCCGACAGACGTGTGCCGCAGACGGGGGAATGTTGGCCATGCC
GAAGGACAGTGAGACCAACGATTTTATCGCCGTACTGGGAAACGGAGCGC
GCTGGATTGGGCTGACTGACATCAACAGAGAAGGCCACTCAAAAAACAAC
AGCTGCACCTTCATCCACTGCTCTCACTACAAGAAGAACTACTACTACTG
CTGCAACTACTGCTGCTGCTACCACAACTGCAGCTACCACAGTTGCCCCT
ACTACTACTGCAAGTACTACTACTGCAGCTACTACCCCTGCAGCTGCTAC
TACTGCCAAAACTACTGCTGCAACTACTACTGCCGACACTACTGCAACTA
CTGCTACTGCTGCAGCTACTGCTTCTGCTACTACTACTGCTGCACCTACT
ACTGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01607.0Blg01607.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01607.0-exon-Sc0000381-1570713199:122355..122433Blg01607.0-exon-Sc0000381-1570713199:122355..122433Branchiostoma lanceolatumexon
Blg01607.0-exon-Sc0000381-1570713199:123061..123268Blg01607.0-exon-Sc0000381-1570713199:123061..123268Branchiostoma lanceolatumexon
Blg01607.0-exon-Sc0000381-1570713199:124581..124851Blg01607.0-exon-Sc0000381-1570713199:124581..124851Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000381genomeSc0000381:122355..124851 +
Properties
Property NameValue
GeneIDBlg01607