|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000173:462037..466572+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01631.0 ID=Blg01631.0|Name=Blg01631.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4536bp|location=Sequence derived from alignment at Sc0000173:462037..466572+ (Branchiostoma lanceolatum)
AACAAGATAACACCTTATGGAGAGGATCAAGTGCAAGCTATGCTGAAACG
GAGGTAAAAAAAAAATTGAAACCTTACGTAAGACAAGAATTTTTAGATGC
ATGCATCCATTTGACAGGTTATCACCAGGTGTGATGACCCAGTGTATTTG
GACTTGGGTTATAAAAAGATCTAAAAAGCGTGCTGTGGCGAGGCTGCCGT
GCCATTGCACCAATAGCCCTGAGATTATACACAAGGTCCGTATCTAGGGA
CGTTGTTGCATTTCATTTCATTTCATACAGGAATTTCCAATACCTTTCCT
CCACAGGGCAATGAACCTTCAACTTCAAGGAAGACAAAATAATCAAGCGA
AACACCCACCAGTCTTTCAAATGCCTGGGAAGAAAGCTTGCAAGAAGCCA
ACCCCAACTAAAAGGAAGAAGGTATGCAATTACACAAATAAAGCTATCAT
AAAGAGCTGCTGAATTATATTAAAGGATTTGCATAGATCAACGTCATTAC
AATTATTTCCCTATCCATGCAGATTACGCTTATTGTGAAAGTTATGTTAT
AATTACCAAAAGATAAGAATATCTTTGATGAAATGGTAGGTGCCAAAATT
GAACATTACCCCAAAAATACTTGCACCTCTGAAAAACACATTTCCCTACT
AGTATGCAGATTCTCTGATTGGCTGACAGCTGGTTAGAGGTCACACCCAC
TCTCAAAAGTGGAAACCTCAGCCCGGTTCAGCAGAGCCTTTCCAAGATTG
TTTAGGTTACGGGCGAGGCTCTGTATAGGAGTATGAAATGAGTGCCAAAT
TTGGCGACTGTAAATCTTACCTGTAACCAGGACTTGGCCCAAACTTCAAT
ATGTCAATAGATCTACTGCCTAGTAATTTTTGGTTAGAAAATGCCAATAA
CCATAATTTGTTTTGTATATCTATCATATTTTGTATGTTCTATATTATAG
AGCAAGTCTCCGTCTCCTCCAAGACAAGTCGCCAAAAAACAGCCGCGCGT
AGAGAACATGGACTGGGAGTCGATCTTATCAGATGACAGGGAGAACAGAT
CTGTGGCGGCTAATGTGATCAAGTCCAAAGATTCGGGAGTTGCTACAGAG
GAGGAAGATGCCCTCTTGCAGGTATGTAAAATCTTACATCCAGCCAAGAT
ATACATTTCATTTCATTTATTGGTTTGGCTGTTTGGCACACACAACCAGG
GTTGCCCAAATATTTGCATTTTTATTGTCTTATTTTGACCGCAGTGGGCG
ACACTATGGGATTGGTCAAGGAGGTAATATAATTTATATATTAACCTCCT
TGGATTGGTCAACTCACTTTTCACACTTTGCAACTATCTGGTTTCTTTTC
TATGACTTTTCCAGTTGAGTGCAGGCCATCCCACCATGACAAAAGTCTTG
TCCAGCAGGCTTCTCTGGCTCCAAGCAGCTCTGACCTTCTGGAAACAAAG
CCCAAGTGCCCTTGTCTCCTACATTCTGAGGTATGGAATCACTTACATGT
ATAGCCTGGCATCCAGTTTTGTCGTTAGCTTTAGGAGTAGTCTGCTTCCA
ATAGGGGTAGCCACTGTTGGAAGCAGACAGGACTGGAGTTCAGTTACCAC
AACTTACTTGAACATTTTAAAAACACTTCAGCTTATGCAGGGGTGCCTGA
GTATTCATACAAATTTTAAGGAATGCATACAAATCTTACCAAATTCATAC
CATTCACTACTATGAAACAGAAATTTTATGGAATTTAAGGAATACTAGTC
CATGTGTCCTTGCTGTAAGTAATTCTGTAAAATTTGTATGTTTCTTAGTA
GTGGATTGTATGAATTCTGCAAAATTTGTATGTTTCTTAGCAGTGGATCA
TATAGATTCTGTAAAAAATTTGTATGTATTCCATAAGACTCCTTTGAATT
CCATATTATTCGTATTCGTACAAGTAAGCAAGTAAGCATTCGTATGAATA
TTAGGCACCCCAGTCCCCTTATGTGAAAACACTTTTCGACTTGTTCTTTC
AGAATAAACAATGATGCTCTGCTAGCTGATGTCATTCCAATCCTGATTAA
GAGGTGAGAACTTTGTTACTTTGTATTCATGTACATTTTTCTCTGGGTTT
TGGAATTACTATTCTACTGTATACGCATGGACAGGCTTTTAGCTAGGATT
TATAGACAAGGGGTCCAAAAATGGGGGGGGGGGATGCTGTGGTTAGGTGT
GTTCTAGTCTTATCCTTGTTATTTTAGTATCATGCTTCCAAATGACACAT
GGACGCATGCCTAGCTAAAAGCCTGCGACCACGATATAATTTATCCATGT
AAAACATATCTTTAAAGATTTGATAAGCTGTAGTACAACAATAGATTTTT
GAAAGGAGTGATGCTTTATAAAGTGTTAGACCTTACTCTTCTTCAACTTT
GAGGTGTTCAACTTTGATGATGGTCAGGTGTAAGCAAATACGTTTCTTAG
TCTCACACTTCTATATTTTGTTCAGACATCAGTGACAAATACTAAATCTG
ATATTTTGCACAATCTTTGCAATTTCTAGCATCAAGGATGGAAATGCCAT
TGGGAAGCCGATATCAATGGGAGCATGTCTTGAACTGCTACCAGCTCTGC
AGAAGATGCTTACAAGCAAGTATGAAGAGTAAGGAAGTGTCATGTTTCTC
AAAATATAGTTATGATTACAAATAAAGTCAACATGCATGTACAACATACA
ATCTTGACTGAGACCAATTTTTCTGCCAGTAAAAATTGCTCATTCATGTG
AAGAAAGCATGCAAGATGCTTAATACTAGACAGTGTGTATGATATATATA
TTCATAATCATTTGTAGTTAATGTTGCATTTTTTTTACCCTTGATAGATA
GACACAAGAGGCTCATCTAGTTTGATATTCTTGTCAATGAGGACCTATCA
TAAATATATTTTAGTATTCCAGTCATTTAAAGTTATTGTTTAAGTTATTA
TAGTTGTTTACTTGATGCTCAGCCTATGTTGTTGCCCCCTCTCGCAGTTA
CATCTCTGGGAGCCTGGACTTGATACGCACCATCCTGAAACACTGGTGGA
AGGACCTCAAATCGCTACACGCATCCCAACAGAATCTGAAGCTTGGACTC
AGGAGTAGGTCAGTGACCCATCAACACATTTTTGCTCTCCATTTGGAAGA
ACAGTGGAACATTTTGCTAGTAGGTGACAGATGTGTCCTGTAGTGATTGT
ATATCTTAGTGAATGTAGGACTACAGATTATTTACTCCATTGTAGTTACA
TAAGCTGATTCGGCATTAAGATCTAATTCCATGGATCCGTGGGTTCAACA
CCAGCTCCGACATTTTCTAGTGGTTTGTGTTCATCATTTTTTTAAGGTGA
CGTAAAGCTGGCAGCCTTGTGTATGAGCGAGTTTTAGGTGTTATAATTAG
CCCTTGGCATCAAACATATGCAGCATGCAAAAGAACCCATGTATGTATCA
AGACGGGGTGACCTGCTGTGGTTGGCTAAAAACACAGGCCATAGCAAAGC
TGCACTGCACTTTAAGAAAATCATGCTTCAATTGAGGATAACAAATTAAA
GAAGATGCTATCACTCACTCATGACCCATGACCTCAGTGGTCGTAGGGGC
GTCATGACAGCCAGCCGCAAAGATGCTATTACTGCCAGTAATTGAGTTTG
TTTCCAAATTCATGTGTATCATAGTGTTACAAATTGTTTTCTTGTTATTT
TTGTTTAACATCATAACTAATTTTCATGTTTCACCAGGAGTGTTAATGGG
GTGTACACTAGCATAGTGGCCATGACTGACACCTTGCAGAAAATAGCTAC
AAGGCCTGGCAAAATTGGACAGAAGGCTCAGGTAAGCCAGATATTTCTGA
AAGTGTGTAGTTGATAGTCCATGAGGATGTCCCTGTAGCTCAACTGATAG
CATCCTCACAGTTGAGCTCCTGGTTCCAATTAGTTGGTAACTGGGAGACC
CCAGTTCAATCCTGGGAAGGGCATCTTGGTTGGGGCTGCACCGTTTTTGG
AAGGTAGGTAAAATGGGGAGCCATCACGCTTTTCCGAGGGGTGCCTTGGC
TTGAACATGTTAAAGGGGAAGGGCTAGGAATCTCTCCCTGTAAAAATATA
TCGTTACTGAAACAGCAAGGAAACTTGCTGCCCTATGTGCCATGTACTTC
GACTTAAGGCACTACAACTTAGTACAAGGGTCTGAACAAACAACTGTTGA
TACCAGTCCATTTAAACCCACAATACTTAAACTGCTTGTAATAGAGTTTG
CTCAAGATTATCATTTCTTGTAGCCTGATTGCCATCCTCCGTGGTAACAG
CTGGCTCAATCTTTTCAAAATGATTCAGCCAGCGGTTACTACAGAGGATG
CCACCCAGGCTACAGTTCTTGCCTTTGGGCCAGCATTCATGTACAAATAC
CTAACATGACTCTTGTTCCCTAGGTCGTTTTGCAGATTCTCAAGGATCTG
TGATTGTTGCGGAGCTGAAGACTGGACTGGTGTCTGGGGTGGTACAGAAT
CAGAAAGTCCTGACACACATACTGCTGCTTGTTTGA Coding sequence (CDS) from alignment at Sc0000173:462037..466572+ >Blg01631.0 ID=Blg01631.0|Name=Blg01631.0|organism=Branchiostoma lanceolatum|type=CDS|length=993bp|location=Sequence derived from alignment at Sc0000173:462037..466572+ (Branchiostoma lanceolatum)
AACAAGATAACACCTTATGGAGAGGATCAAGTGCAAGCTATGCTGAAACG
GAGGGCAATGAACCTTCAACTTCAAGGAAGACAAAATAATCAAGCGAAAC
ACCCACCAGTCTTTCAAATGCCTGGGAAGAAAGCTTGCAAGAAGCCAACC
CCAACTAAAAGGAAGAAGAGCAAGTCTCCGTCTCCTCCAAGACAAGTCGC
CAAAAAACAGCCGCGCGTAGAGAACATGGACTGGGAGTCGATCTTATCAG
ATGACAGGGAGAACAGATCTGTGGCGGCTAATGTGATCAAGTCCAAAGAT
TCGGGAGTTGCTACAGAGGAGGAAGATGCCCTCTTGCAGTTGAGTGCAGG
CCATCCCACCATGACAAAAGTCTTGTCCAGCAGGCTTCTCTGGCTCCAAG
CAGCTCTGACCTTCTGGAAACAAAGCCCAAGTGCCCTTGTCTCCTACATT
CTGAGAATAAACAATGATGCTCTGCTAGCTGATGTCATTCCAATCCTGAT
TAAGAGCATCAAGGATGGAAATGCCATTGGGAAGCCGATATCAATGGGAG
CATGTCTTGAACTGCTACCAGCTCTGCAGAAGATGCTTACAAGCAAGTAT
GAAGATTACATCTCTGGGAGCCTGGACTTGATACGCACCATCCTGAAACA
CTGGTGGAAGGACCTCAAATCGCTACACGCATCCCAACAGAATCTGAAGC
TTGGACTCAGGAGTAGGAGTGTTAATGGGGTGTACACTAGCATAGTGGCC
ATGACTGACACCTTGCAGAAAATAGCTACAAGGCCTGGCAAAATTGGACA
GAAGGCTCAGTTGGTAACTGGGAGACCCCAGTTCAATCCTGGGAAGGGCA
TCTTGGTTGGGGCTGCACCGTTTTTGGAAGGTCGTTTTGCAGATTCTCAA
GGATCTGTGATTGTTGCGGAGCTGAAGACTGGACTGGTGTCTGGGGTGGT
ACAGAATCAGAAAGTCCTGACACACATACTGCTGCTTGTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01631.0-exon-Sc0000173-1570713199:462037..462089 | Blg01631.0-exon-Sc0000173-1570713199:462037..462089 | Branchiostoma lanceolatum | exon |
| Blg01631.0-exon-Sc0000173-1570713199:462343..462457 | Blg01631.0-exon-Sc0000173-1570713199:462343..462457 | Branchiostoma lanceolatum | exon |
| Blg01631.0-exon-Sc0000173-1570713199:462987..463157 | Blg01631.0-exon-Sc0000173-1570713199:462987..463157 | Branchiostoma lanceolatum | exon |
| Blg01631.0-exon-Sc0000173-1570713199:463401..463516 | Blg01631.0-exon-Sc0000173-1570713199:463401..463516 | Branchiostoma lanceolatum | exon |
| Blg01631.0-exon-Sc0000173-1570713199:464039..464089 | Blg01631.0-exon-Sc0000173-1570713199:464039..464089 | Branchiostoma lanceolatum | exon |
| Blg01631.0-exon-Sc0000173-1570713199:464566..464664 | Blg01631.0-exon-Sc0000173-1570713199:464566..464664 | Branchiostoma lanceolatum | exon |
| Blg01631.0-exon-Sc0000173-1570713199:465034..465144 | Blg01631.0-exon-Sc0000173-1570713199:465034..465144 | Branchiostoma lanceolatum | exon |
| Blg01631.0-exon-Sc0000173-1570713199:465774..465867 | Blg01631.0-exon-Sc0000173-1570713199:465774..465867 | Branchiostoma lanceolatum | exon |
| Blg01631.0-exon-Sc0000173-1570713199:465970..466039 | Blg01631.0-exon-Sc0000173-1570713199:465970..466039 | Branchiostoma lanceolatum | exon |
| Blg01631.0-exon-Sc0000173-1570713199:466460..466572 | Blg01631.0-exon-Sc0000173-1570713199:466460..466572 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000173 | genome | Sc0000173:462037..466572 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01631 |
|
