Blg01636.0 (mRNA) - B. lanceolatum

Overview
NameBlg01636.0
Unique NameBlg01636.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0001252:6262..8131+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01636.0 ID=Blg01636.0|Name=Blg01636.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1870bp|location=Sequence derived from alignment at Sc0001252:6262..8131+ (Branchiostoma lanceolatum)
ATGGATCCCTGCGGTACACCACAGGTGACACAAGTTGAGGAGGATAAAGC TGAGCTTACACCCGTGCATTGCTGCCTACCAGTCAAGTAAGACTTAAACC CGCCACAAGCAGTCAAGCTGAGTCTTCCACGCCATAGCATTTCAGTTTTA GCAGTGGTATGTCGTGATCTAGCGTGTCAAACGCTCTTGACAGATCACAG AAAACTACACCAGTTAGCTCTTTCTTTTCTATGGATTGAGTCCAGTCTTT CACCACAGAGTGTAACGCTGTCTCACATAAGTGTAGTTTTCTAAAGCCAG ACTGACGGGATGTTAGCAGTCCGTGATGGCTCAAGTATGTGTACAGTTGG TTGTGAACTACTCTCTCAAGAATCTTTGATACCCCCGACAGAAGGGACAC AGGACGGTAGTTATTCGGATTTGTTTTGTCCCCCTTTTTGTGTATCGGCG TAATTTTGGATTGTTTCCACTTTTGTGGAAACTCTCCGGTACTCAGTGAA AAGTTGAACAGTTTGGTGAGAGGAGGACCGAGGATACGTGCACCAACTTT CAAGAGCCTTCAACTTCAACTCTATCGCAGACTGGCGTACGGTGAGGCTG CCTACTCTGGAATGGCTACTTGTGGCTACAGAAAGGTGACGGCAGCTGTC CCAGTGCATTGCTCACTGAATCTGTACCTGCAAGACGCCTGCAGACAGTT AAAGGCCCTTTGTGGCGCAATGGACATAGCAAGGGAGATCGACAGGCTGA ACTACTCGCCAAAGAGAAAGACCTTGTTAAGTCAAACTAGCATCTGAAGA CGAAACATCAAGCGGTACAGTTAAGCCTCTGTGTCCCACACGCTAGACTG TAAGAACAGCAGCACTGAAAAGTATTATCAGCAACTAGCTAGATAGAGTA CCATCATGGAGAAATCAACGAGACAACGAGAGATGAGTATAGGTTGAAAG CGGGCGGTGTACTTTCAGCCCTGGAGCACCTTGTTCGCACTTCGTTTAGG TCAGTGTTTTTATCGGTCTCCAAAACATTTAAAAGGAAGTACTTGAGTGT ACAAGAGGCGGTCGTTAGGGTTGACACGCTCCAGCCCTACTGTTGTCGAC AAAGGTCAGATGAGTCATTTGACTCATTCTACATGCTGACAGAGAAAGCT ACGAGCGAGTCATTCAATCCACATAATGATTAAGCATACTTTCTGTTTCA GAGAAACCGAAGAGTCTCACTTCTGCCCAGGAGAGGAGGAAGAAGGATGA TGCGGTAGCCAATACATTGGACGAGGCAACCGCCGTCATCCTGAAAAAGC TCGGCAGGTAATTGTCAAAGGCGACTTTGTCATATTCACAAGAATCGATT AGACAGTAAGAATTTTTAAGAAACCTTCTAGAAGACAGAAATTGGATGCT TAAAATCATTGTTTCTAATCCATCACTGTTGTTATATTTTCTGTCCTAAG GGTAAGATGACAGGCAAGGCTGCGGCAGCCACAAAGGGACGCCGTATCGC CCCAGATGCCGCCCGGAAGTACGAGTCCGGGAGTGCGAGTGGAACTGACA CCGATTCATCAGTCGGAAAGAAATCCCGTCACACCCCCAAGTTCAGCAAA GATAACATGAAGGTAAGATAACGTAGCTTTACTTTTAGTTGCCTGTAGGT GACTTTGACAGTTTCAGAAACAAGTGCAGAATAGAACAAATCATTTTAAA AAACTGAGACAGGGATAAGGGGACGTTCTAATCCATAACTGTTGCTATTT TCTCTCCTTTTGAAGGATAAAAAGACCTTGATGGCACGGGTCACCCGCCT GAAATACGCTTCGGACTCTAGTGGGACTGAGTCCGACTCCGACGCAAACC CGACTCGGATGAAGGTATAA

Coding sequence (CDS) from alignment at Sc0001252:6262..8131+

>Blg01636.0 ID=Blg01636.0|Name=Blg01636.0|organism=Branchiostoma lanceolatum|type=CDS|length=408bp|location=Sequence derived from alignment at Sc0001252:6262..8131+ (Branchiostoma lanceolatum)
ATGGATCCCTGCGGTACACCACAGGTGACACAAGTTGAGGAGGATAAAGC
TGAGCTTACACCCGTGCATTGCTGCCTACCAGTCAAACTGGCGTACGGTG
AGGCTGCCTACTCTGGAATGGCTACTTGTGGCTACAGAAAGGGTAAGATG
ACAGGCAAGGCTGCGGCAGCCACAAAGGGACGCCGTATCGCCCCAGATGC
CGCCCGGAAGTACGAGTCCGGGAGTGCGAGTGGAACTGACACCGATTCAT
CAGTCGGAAAGAAATCCCGTCACACCCCCAAGTTCAGCAAAGATAACATG
AAGGATAAAAAGACCTTGATGGCACGGGTCACCCGCCTGAAATACGCTTC
GGACTCTAGTGGGACTGAGTCCGACTCCGACGCAAACCCGACTCGGATGA
AGGTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01636.0Blg01636.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01636.0-exon-Sc0001252-1570713199:6262..6347Blg01636.0-exon-Sc0001252-1570713199:6262..6347Branchiostoma lanceolatumexon
Blg01636.0-exon-Sc0001252-1570713199:6842..6896Blg01636.0-exon-Sc0001252-1570713199:6842..6896Branchiostoma lanceolatumexon
Blg01636.0-exon-Sc0001252-1570713199:7712..7873Blg01636.0-exon-Sc0001252-1570713199:7712..7873Branchiostoma lanceolatumexon
Blg01636.0-exon-Sc0001252-1570713199:8027..8131Blg01636.0-exon-Sc0001252-1570713199:8027..8131Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0001252genomeSc0001252:6262..8131 +
Properties
Property NameValue
GeneIDBlg01636