Blg01640.3 (mRNA) - B. lanceolatum

Overview
NameBlg01640.3
Unique NameBlg01640.3
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Full-screen view
Sequence
The following sequences are available for this feature:

mRNA from alignment at xpSc0039742:3088..18318-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01640.3 ID=Blg01640.3|Name=Blg01640.3|organism=Branchiostoma lanceolatum|type=mRNA|length=15231bp|location=Sequence derived from alignment at xpSc0039742:3088..18318- (Branchiostoma lanceolatum)
GCAGAAAGATTATTTTCTCACATTTATAACCAATAAAAATTTAAAAAAAA
ATGCTTGTTACAGTCATCTGTCCCGATGGGTTTGAGGTCATTGACGGGTC
ATGCTACTATTTCTCGGACGAGAAGAAAGAGATTGATGAGGCGAAGTGGG
ACTGTGACTACCTAGGAGGCTCCTTGGCCACATTTGACGACTGTGATACC
ATCTATACAGTTACATCAAGTGCCGAGCCTTGCCCGTATGTTTCGTAACT
GATGGGCAACACTTTCTACAAATTCATAGATACGCAGACTGCGCCATACA
CTCTGCTTTAGTTGAAACATTTCCTTTCACAAACTTAATAGAAATGTTGC
AAGAAATAGGGGTGAGTACCGGTACAGAAAATTCAGGTCCGGTCAAGGTC
CAGGCCCAGACCTGTACTGATTATAGTAGTGCTGCAATACATCATATTTT
GGAGAGCGAGACAAAAGTGCAGGTCTCTATGAATCCTACAAATTTATGTT
CAAATTGTATATTAGAATGATATGGTTATTTTCAGTGCACACCAATGTGT
AGAAAGGAAACGAAGATGCAACTTTTTTTAAATTCCAAGGTAACTTTCAT
CTCACAAAAGAGATTCAGAGCAAACTTGCCCTTCTTGGGTTGACAGCTGG
ACATTATGATAATCAAATAATCTTACTTTAGATGTTCAACTATTTTCAGC
AGTTCTAAGCATTTACTACTTTATTATATATTGTCATGTGACCGCATGCT
GGTAGCCTGGTACTGTGAATTTTCTAATTGGTCCAAAACCCGGCCGGTCC
ACTGATTTTTCCGGATCTTTTTTTTTTACCGGCTACAAATACCGAGTACG
GTACGTGGTACTAGCACCGGTACCCAGCCCTAGCTTAAAATGATTAAGAA
AACGTAATACATTTAGATATGAGATACAGAAACTTATTCAGTATATGCAA
AACATAATTTTTTTCGTTATATGGCTTATGATAATTTTTTTGCTGTTTAC
AGGTACTGGATCAATCCTTCTACTTCTACTGACTGTGTGGATCCATATCC
ACCGTAAGATACAAGTTAGATATTGCTATTTTCAACCTGAGATTTTATCG
GTTTATACATGTTTTTCGACCTCATACCTTTGCCAAATGGTTTTAACCTT
TCCGACTGATGTATTATGAGTGTTTCTCGTTTATTATCATGCAAATGAGA
TAATAATTTGCATTAATTATACTAGTTCATCCCCTTCTCCACCCAAATAG
CAGAAGTTGTGTAAGACAGTTAACCAAGAAGTCTATTCTAGCATTTTTGT
AATCAATTATGCACATTATGCCCTCATTTACAAAATTCATATTCAACCAT
GTTAACCTTCACAAAGGTTGTAAATGCCACAAGTATGAAATTTCAGTTAT
TTGCCAATGTACGTAGAATTATATATTTTTCCATTAATTACACAAATTAG
GTCTTCATTTGCATAATTTGTATCTATCAATGTCCTTCTATTTCTCAGTT
ACATATGTTACGTTTACGAATAGTCCTATCATGGAATGCAGTGGGGTCAT
AAACCTTTCCATTGATTATGTAAATTAGATTCTGATTTACATAACCACCA
TTTCGATCTCAAAAACAAGTTGTATATACTTTGTGTTTTGACCACTACCT
GTAGGGCCCCTGTGGAATATTTGTCCAAGTATGTTGACTGACAGGTGTTA
GGTGCCACATATGTTATCATGCCATATAGGGGATATTTAAATTTTCCTCA
TTAAATTAGCAAAAAAGGGGGGCCGAAAATCTCATCATTTCTAGATTTAA
TACCTACCTACCTACCGACATACCAAATATCAAGACAATCCATACAGGTA
TTCTCACTAACACACACACACACACACAAACACACACACACACACAACAC
ACAAACACACACACACACACACACTGGAAAGACAAACTCATTGGCGAATG
TAATGATACCTGTAATGTCGTTTCAGAGACTATTACTACAAGTACATCTG
CGAAATCCCCAAAGGTTAGTAAACCAATCGTTTTGTGAGCTTGCAATTCC
AATGAACAATTAGACAATACCAATTATGAGCTTTGTAACAATTACTATAT
AGTTTTCTCATGAAATGCATGGTGCTAATGTAGAATTCATGATGTATGCC
TGGATTCCATGTGTCTCCCTTATTTTTTAGTGCTGTGGCTATTTTCAGAA
GCACACTGCTTCAACATATCAAGATTAGGAAATCTTGATTAAATCAACAA
CATTGTGATTGTGATCAAGCTATAGAAAGTGAGAATCAGGGCCCAAAATA
CTTTTTTTTCCCCACGTCACTAGCAGATGTGCAGGCGACCTTCAAAATTA
CTTAAACTTCAACAGTACCATTAATGTTCCTTTTTCTTTTCCTTCAAGCT
CAACAAAACATTGTGTTTAACTTAACGGTGTTACTGGTACCATCTTGTAT
GTTAAGTCTGCTGTGCATCAATTGTGAACTGTGCAAGGCATTTTAGGTTA
GGATAAAAGTAAAGAATACCAAGTACATAGACCAGTGCAGGTTAGGAGCA
GATATACTTCAGTAATAAATACAAATGTACCAATATTTAACCTTCACTAA
CCTGAATATTCGGGTGGTAATTCAAGCCCTGAACACGCATATGTTCAAGC
TTTCTAAACGAATTTATCTTTCTCTAAACCCATGCGTGACATTTCACAAC
TGTCTCTGGAAAGCTTGAATTATCAGTGTAAATTAGTTGATGATAAACCT
TTAAGACCTATGTACATTTTGATAACAACGGAAACATCCATTCTCCTTGC
AAATGTAATTGGCTTGGCGAGAGTATGATAGAATATTTGCTTAAAGTTGT
AATGTGTTAATACTTCAAGTATTGCATTCCTACATCAATCTGTGTATGAT
TACAATGAGAACAAAATAATACAGCTTTCTTAATTTTCCCCTACAGAGAC
AGAATGTGAAAAATACTGTAAGGGTAAGTGTTGGAAGGAGGGGAATATCG
GCTGTGCTGGGCCGGTTGGCCAGCGGGCCCCTGCAGACTCCCAATGCACC
TGTCCAGAAGGCCACTTTTGCTGTGTGCCAAGAGGCCCACGTGGGGAGAT
CGAGCCAACCTGCCCAATGACCTGTGAAGGAGAGTGTCGGTACCCTGATC
CAGACCTGGACGATGGAGGTTGTGACGGACAGTGGAAGGACGCTGACGAG
TGTCCATGTCCATACGAAACGCGCTGCTGTTGTAAAAAAGGTAACCATTC
AAACGTGCCAGCTGATGTGATGCTGTTTAAAATGCTGTACCCTAATGAAA
TTTAAGTTCAACATGTATCATGATATAATATACAGCGCATTTGTATAGTG
TTTAGTTACTTTCTCTCGTATCCATTACACCAATTGTGGGAATGAATGGG
GAATGAATATGCAATAAAGATTACTATAATCAGAACACTGTGAGATCCAT
GATGTCATCATCAAAGTATGTTATAAATGCAATTATTGCATCTTCCACAT
GTCCGAGATACATAGTTTTCCATAACCCTTAATTTTGTCGTTACTACTGT
TGCAGGAGAGGTACAGAGAGCACATTGAAAAGTCGGAGATCTTAATATTC
ACTGGTTTTACTAAAGATATTTGTTTTACAGGTCATGCATACTGTACTTG
ATTGTACAAGATTGATCAATTATTTTATTTCCAGTGGGAATAAAAATGAG
GAGGATAATATCATTATCAAATATTCTTCTAATGTTGAAATTCTGCCTCG
GACTCTGATCCTTAAAATAGAGAAAATGACAAAATATGCATTTCCCAATT
CTTTGAACATTGTACAATTTTTGTTTCCTTTGGATGATGACTTTTAATGG
AAGTCAAGAATCAAAGTAGAAATTTATTTCAAATTACCAATCAATAATAG
TTGTTTTTATGACCATCCAACGAATTCAACATGAGATTTCCTGAACCACA
TTACTGAATAAATAAAAACTTATACATGTAATACATAATTGAATCTGTCA
CTGTCCTACAACATTAAGACCAAAAGTACAAAGCGTTTTTAATTTTCCCT
CATAGAGTCGCAATGTGAGGAATACTGTGACGGCAAGTGTCTGTATGAGG
ATGCGGATTGTAGTGGAGACTACCAGTGGGCCCCTCTAGGGTCCAATTGC
TCCTGCCCGGAAAACAAGCGTTGCTGTGTGCCAAAAATGCCCAGCTGCAG
AGTGACCTGTCAAGGAGAGTGTCTGTATCCCAACCCAGAGTTGCAAAACG
AAGGATGTGATGGAACATGGAAGAGCCTTGAGGAGTGCCCCTGTGGATAT
GGCGGGCGCTGCTGTTGTAAAGACGGTACTTATTAATCTCCAAGCAGATC
TACACGGTGCACCGAAAATCGTATATGCTAGCCAGATAAGCGCCAGCCCT
ACAATGCGGACAGGAGCTCATCTGGCTGACTGGAGCCTATCTGGCTAGCA
TATACGATTTTCGGTGCACCGTGTAGATCTGCTTGGAGATTAGGTACTTA
TTAGAATGTGCCAACTATCATGAGCAGTGATGGTTCTGAAGGATGTTGGG
AAAACACCATTCTAATCATTACTGAAAGGGACAAAATTGATAAAAGCAAC
TAAAATCTATTTGGCGATAACCTGTATGATGATCTAGTGAATGACATCTT
TATCACATGTATTAAACGCATATTTGATAGGCACTTGAATCTAGATGGGG
AATTATCCTAATTCCCATTACAGAACAGACACACACATGTCATGCACAGT
AAATTGATTATGTCCTTTTTCATATCATGAACGTCAAATAGTGGTTTAGA
ATTCATATCCATATGATAGAAACAATTACAAAGGTGTATTTCATTTTCCC
TGTTAATAATGTCCAGATGATCAAGTTTTGGTTTAATATGACAACTATGC
AAGAACTGATTGTACCTTTTTTGCCTGTCTAATGTAATCTATTTCCTCCA
CCAATCGGCACAGAGTCTACAGAGCTTCCTACTCCTACACCATGTCCACA
GCCGCCACCGCCGTTTTCCATAGATGAGCATGGTACGTTAACTCATCACA
TAATCTGAAACGTCTTCAAATTTAAAAAGGTGTTTAGGAGAATGGGAAAT
ATGCAACTGATTGATATATTCAGGTATTATGTTGACTTAATGCAGGCATA
TAAACAAGTTAGTATTGATTTTTTAGATGAAGTCTTGAAGTCTTTTCCTT
AGATAGATGCATAATAACTTTGAACCGTCTACTTGAAACAGAAAAGAAGC
AAAATTCATGGAAACAGCATAATTACTGTTCTTCAATGAAAACTAATCAG
TTATTAGTATTGATTTGACATGTTGTTTTGATAGTTTACCTAGCAGACTC
AAGTTGATTCTTGTAACATTCACAAACTGTTCCTTGTGTCGCTCAAATCA
CAGATGTTCTTCATCTCAGACTATTATCTGATTTGATTTTTTTGACTGTA
AAAAAAGTACAGCCAGGGCTACCCAGCTAGCCGAAGGCTATTACACAGGG
TTATCCCTGGGAACAGTATTCAAAGTCCAATACAAACTTTCACAAAGCAC
GTCAAACACACACATAAAGGCGTACACAAAACGCAAAGCTAAAATACATA
GAAGAAACAAAATTAACAAAAAACAGCACAAAACAGTTGCTGTATATAAT
ACCGTGAAAACAATTTGCACCCCTACAAACGACTGTTTTTTTTTCCATAT
TAGGTTGCGGACTGCCCGAAATGGCAGCCCTACCTGACGATAAAGGTACG
AAGCTATAGTTAAGCCGTAGTTTTTGACACTACAACAGCAATCCTGTGTA
AAATGGTAGATACTCTTTTATATGCATATAATACATTTATGTATCAGTAT
CCCTTTCAGTCATTCTGTCTAACGTTACAATTGTTATTATGTGCATCATG
AAGATTCACAGGGTAGGGAATATTTCATAAAAGTGTTATAGTGCAAATGT
CGGCATACAGAAATGATAAGCATTTAGGAAGTGAAATGTAGTTCTGTAGT
ATTTTGCTTCAAATTCAAGAAATATTAAAATTAAATGTGCAAGTATGCAG
TGCCTTTTTAACATGTTGTATGAAGAAATGTAACTTTGTTTGATTCTTGA
TTGTTCTTTTTTATCATTACGATATATCTCTTTGATCTCTTAAGATAAAT
GTAACTTCGTATGTAAATACATGATTGTACTATGTAATTTGCTATCACAT
GATATGATACCGTTAGCTGTATACACGTCCTGTAATATGTGCATAAGATA
TATCAATCTTTAAAAGTCTGGCATAGAAATGATACACCAAATAGCAGTTA
CTCAAGTTACTGGATATCATTTTGGAAAGATGTCACATATTTCAGGTAGC
ACCCACTACCTTTGGTCAGTGACACAGTGAAATAAAAATGATAGTCTGAG
AAAAAAAACTTTGATCAGGAAAATATTAAGCGAAGAACATATGCATGTTA
CTCATAATGGCAAAACACAATTCAGAATTTAATATGAATCTTGCTAAATA
TGCTAGACAATGTTGATATCCTTAGATACTTTCATGTAAATGATAGTTAG
AATATTTAATTCATATATATCTAAAACCGATAAAAAGAAGCTACAGAATT
GAATATAACGTTGCATGTACTTGTAAAAAAATCCAGTCAATACGGGAGAA
AACAAAGTCAATATTTCTTTTCTAACAGCTTTCGACTTTGAAGCCATGTA
CGAGTCTCTGCAGTACTATGAATCTGATCCGTACGCGGGTGAGACAAAAT
TCGATCAGGTCAAAGAACAGTTTGAGAAATTGAGTTACCAAGATGGAGAA
AGCCTGTCCGGCATGACAGGAGATCTCACAGATGCCATCAAGGCCATGAA
GAACGTCTGGGTGTTGCAGTACACCGACTCTGGGACTGGCTACGAGATTG
CCATTCTCCTTCAAGACTTTGACCCTCGAACAGGTACATGTGTGCAATAT
AGCCTTGTAGGTAGAGTGGTTCAAATCCAGTCCTGGCAAACAAAGTTGGA
AAATGATATATTCAGTTTTCAGTTTGCTAAATAAATAAATGAAATAAAAA
GTAGATAGAGTGGGTGGGAGGTCGTTGGTTAAAATCCAGTAGCGGTATAC
AAAGATCTTGAAAATGGTATACTAGTATTCAGTTTTCTCTGCTTGGCAAT
TAGGGCATATGGGGAAGAGTATGGCAGCCAAACAAGCTCACTGTTGAACC
AAGTACTGACAGACCTGTGTGGTAAAAGAGCTATAGAAACACCGATTGGC
GCCCAGGTCCTGAATACTGCAATTTGTCTGAACGATTTAACTTAGCTGTG
AGTGGAAAGCACGTTCGAATGGCGTTGTCATGCATGGAATACAAAGCCAC
AAATTTGCATACATTCATGAATATTACACTGAATTGTGGCAGATTTCGAA
AACGTCTATCATTATTAGATTGCATAATGGTCACCATGTCGTAGGCCTTT
GTATGACTTGATTTGTCTCTTAGACACAGGATTTAAAATCGTTTGACACT
GTTGACTACCCACTTGTACATTATTACTATCCATTGTAAATATTGTGCAA
TGGATACAGTGGAAGATGAAATACATTTCATTTGTAACTGCCCTCATTAT
GAGAATGAAAGAAACAAGCTTTTCGAAACAACCAAAACAATATTTCCCAG
ATTTCACCATCTAGAAGACCTAAAAAAAACTCGATTTCTACTTAAATCAC
AAAACCCACCAATCATCAAAAACGTGGGACTTTTCATCCGCCACTGCCTC
CAAATAAGAAGGCGAACCCCCCAGTAATGTTGTATGTAGATATATTAGTT
AGATGTATAGAATAGACACTTGTTACCATTGTTACCCTTTCTACTGTTTG
TACCCTTGCAATTAGCCTACGGGCATGAATATGCAAATAAAAGTTATCAT
TAATGCTGATCTGCTTTGTTTTCTCCTCTTGCAGGGATGCTGCCAGATGA
TCTAGACTTCTCGGGTCTTTCTTTGGGCTATGATTTTAAAGAGAAATTGC
ACCTCTTGAAAGAGCGATACAAAGAATTGCAGCTTAATGTGCATATCCCA
GACTTCATCCCAGACTGTGAAATTGTAATTGAAATTAAACTGAATTCATA
TTTCAGTCTTGTTAGGGTGCCCCTAGTTCTCGTGGCCTGCATTCAAATAG
AGTGCGAAGCGGTGATTATAATTCCCGTGGTTTGCTACTCTCAAACCTGG
GTCTGGTACGGTGAGCCGTATTGTGAGTGGGTTTTGGTGACAAGAATCTA
CGTCAAGCAGCTGATCATACACATCACCTTCTGGGTCAGGTATTGGTGGA
TCACCGCATTCCCTCCGTGGGCAGTACAACCACTTCCAGGTATACGTACT
AAACTGTTACTCAAAATATCCATCCATGATATGAAAATACAACAAGTATA
ATTGTAAGCAATATTTGACTAATTGTGAGGACTTTTCAGCAAGAAATCTT
ATCTGTGACAACTATGAATGTAAGTTTTGTAAGCTACATTTGTATAACAC
ATCCCATGCCATTGTTTAACACGGATAAGTTTATCATAATTCACTGCCAT
ATTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCCCTCTCTCAGAATTAGTTTCTCTATATACAGTCAAACCTGGATT
CAGTAACCACTCAAAGGAATGAGGGAAACTGTTTCTGAGGATAGATGGTT
GCACAAGACAGGGTGGGGTTAACAATGTAAAAATGGACGGGACTGTTTTG
ATGTGTCTTATGACTGGAGGTGGTTGCCTGTGCCAAGTGTTTGCCCTGAC
CAAGTCTGACTATTTTTGCCAAAAGTGGGATTTTTCATCGTAACATCTAA
AATACTACATTCTTTTTTTTCTCATCTAGAGTGTCCTGAACCTGGCATGG
GTGACATAGCCCCTTATGAAGGTATCAAGCAGTTATGTTATAATTTCAGA
CCTGCATCATGTTTAGATTTCTGAATGTGATATCATATTAGTCCTTTAGA
CAGATTTATAGGCTACATGTTTAATTTAGCACGCATTTATATTATGTTTA
TTCAAGCTTGACATGTTAGTATCAACCTGTTAGACAAGTTAATGGATATA
TTTGGGATTAACCATTGATGATTAATGATTTACAAGCAATGCAGAAGACT
TTTTGTAATCTAACACCTCACCAATAAAGTCTAAGACAAATGGCTAAGGT
TATGTTCAGGTGTACATTGTGAAATAATAGGAGAACATCGTTTGCAAGAT
TTTCTTGTAATCATATGAGCTACATCGAAACTGAAATGTTTTCATTCATT
TTATGTGGGACCTGAATAACAGCTTATGCCTGATTTGCCATTTCTTCCCT
TGATATATCAAAGAGGATTGATTTGATACCGATATCATATTCTAAGGTTC
TATAAGATTTACATTGAAATGTGAATTTAAAGAGATCTACTAAATTGAAT
GAAGCATTATGTATGCACGCTTAACTTGCAGGTGTTTCAAGACACTGTTT
TGCAATGTTTCTTAGGGTACCTAGTCGAATTGTGAGAGCGAGAGTTAATG
TTACATCATTCAGTTTCAGGGTGCAGCTGATACTTTCCTTTGAGATTCTA
AATCTAGTTATTTGAACATATTTTGTTCTTGCGTAAACAACCTTATTTTT
CCTCAACGAACGTTTAGACAGTCTGTGGATAGGTCTCCATTATACACCGA
TGAAGGTAGCAGGCAGTCTGTCAAACGTTTGTAGACAAAAAATAAGATTG
TGTACACAAGTCAAAAACTATGTTCAATTGATTTACAGACCTGATCAAAC
TTTTCGCAGATAAATTCGGTTATGTTCTCATGAAGTTGACCTGTATGATT
AAACTGGCTCACGAAATACGGCTCCAATATAATCATTAACATTCCTCTTC
TTACAGGGTACCGACCAGAATTTGTAGAGATGGCAATGGACAACTTCAGG
TCTTCAGTGTCTGAAGACATGGCAGCAGAACTTCGAGTAGACAAGTTCAG
GTTTGTGTATCAAGAGGAATTGGGGGGTCAGAGTGATTCCGCACTCTCGA
GTATGGAGGGCGCCGTGACAGACGCGGTAAACGGCTTCAAGGACAAGTGG
ATCCTGACGTACAAGGAATCAGAAGACGACATGGAGTCCAGCATGCTGCT
AGATGACTTTGATCCTACAGGTGTAGTCTCATTGAAACGTAACTCTAGAC
AATGGTATTATTGTAACCTTTGACCTCTGACCTCTAGATAATGATCTTGT
ATTGTTGCATGTAGTTTTTGTAGTTTTATGCTACTTGACGTCTAATGTTA
TGTAAGCGCTGCGCTCCGTAATTGTACCGTGTTTTTATGAATCAGGAAGA
GTAGATTAGATTTTCAGGTCAAATCTAATGGATTTCTAATAAAACATCAA
ACATCATAACTTTTATCCGTTATGGTCTATGCATCTGACTTAAAAAAATA
CATAATGCAAATTATTCGATGGTGCCACGCTGTCAAGGCGTGATCTTGTT
TCTCACAAGGTTTCGGCTATTCCACCAGCCCCCACAGTCATGAATGAATG
AATGAAGTTTATTGCTCGACAATTGTACATGGCACGATGTATGGCAACAA
TGACAAGGCAATTAATATAATTAGTACTAAACTACTCTATTCTATTCTAT
TCTGAAAACAATAACTACAAGTATATGAACTGAATATGAGTCTGATTCGG
AAGAAATGGCTTAGACTCCACCTGACTGAGCTCAAATAGCTTTCATAAGA
TTTTTCTAACTGAATATCGAATCATCTTTAACTTGATCAACAACAGCTTT
TAAATCCTAGTTGTAGTGTCAACCATAAGAAATAACTCTAATTTGAACTT
GATTCTTCTTTCAAACTTATATCATAGAATTTTGTCAGCTAAACAGACAT
AAAAACATAGCATTTTGTGTAACTCTTTGTGCTGTTTCATTTACTTGTGC
AATGTATACTTTGCAGCTGACGAGTTGCCCAACGAGATTCAACTCGGCGA
TCTCTCCGACTTCCCTTCGTACAACGAGCGCTACCTTCGCCAATTCCAGT
ACCGGTACATGGAGATGAGGCAGACGGTATCTCTCCAGTCTGTCATCCCG
ACCAACTGCGGCACCGCGCTCCACTCCATACGGCTCGACGCGCGCTTCAC
CCTGCGAAGGCTACCGTTCTTCCTCATGGCTTGCTGGGAAATTCATTTTA
GAGAATTTCTCATTATCCCAGTCCCATGTTTTGAGGTCTACATCATCTGT
GGCATAAAAGTGGTGATACCTGTAATCAAAGTCATAATCATACGTCGAGA
TTTCTGGTTCGGCATTTGGGTCTTCATCCCACTACCAGGTATTGGAGAAA
ATCATTAGCCTTTTTAGATAGGTTAACTGAAATTTGAAAATAATTTTCAA
ATTAAGTGGATCAGATGAAATTTAAAAAAAAAGTCTAGGTTCAATTTTGT
GCTATGGTTGGTGGGAAAGCCCAAACAACAAAAATTATTTTGTATGGTTA
TTTTCCATCTGATTAAAACACAATTGGGTAGTGCATCACGTGCATGTCGA
GAAAATGTTCGCCATAGATTCAAACAGTGGCAAAATCAACCCCCGAAATA
TGCAATGTACATAGTCTTTCAGCTGTTGCCATGGAAATGGAAAAACAAGA
TTGTGGCTACAGGGGCAATTTGTGACCCTTGCAACCATCGTTGAATGTTG
AAGACATTTATAACTCCAAATTACTGATTATGATTTAACCTTTACATACT
TTGTTTCTTATTATCTAGATTGCCCATTCCCACCAGCAGCACAACCAGGC
TCTGTCATCGCATTTGGGAGCCCAACTGGTCTCAACCATCTGGATACGTG
CACATACAGGTGTCTTCCAGGCTTTGAAAGATGCAAGGGTGTCAATACAC
TTATCTGTTGGAAAGGACAGTGGCGGCCACAGCGCTGGCAGCTGCTATGT
GAACGTAGGTCACAGCCGTCTTTGATGAACATGCAGACTTATCTTGTCCA
AGCAGCCCCCCCCCCCCAAACAAAAATCAAGCTAACAGATATGAAATTCT
GGAGTATATTCAATTTCATTACCTGTGAAAGATTCACAATCACTTCATAG
CATGATACAGTGGCTTCTAATGACCATATTTTTCTATAAATTTGATATCA
AAATAGTGTTTTGTTTACTTTACAAACATAATGTAGTTATGATGTCCCCT
AAAAAGTTACAAAAGATAGCAATGGCTATTAGACTTATAATCTATAATAG
TGTATTAACTTGTAATACATTGCACCCTTTACAATTTTAACATATTGCAA
ATAAAGTTTGCTTTGCTTTGCTTTGATTTGATTAATTGATTGATTGATAT
ACTCAGGATGTTTTTAAAAAGTTATATTGGGTACTGTATCTATAAATAGA
CTGTATGAACAATGTTAAACACTACTCTAACTTCTGGGAAAGTATATTGA
ACACAGTGCACAGTTGACATCACATAAACTCTTCTTTTTTCCCCTCTTTC
AGCAACATGTCCTGCAGCTCCCGCCGCAGGATTTGGGGCAGTCCGTGCCG
TCTGCATATACAAAGCAAACTTTTTCTTTTGGGGTGGGGTAAAAGAAGTT
TGTGTGTACAGTTGTCTCAAAGGTTGGAGCCGCTGGAAGGGGTCATTTGT
TCGGACCTGTCGTAAGGGTATATGGACTGGATCACCCCTAGTCTGCCTAC
CGCCATGGATCCCTTGGCCTAGTAAGTTGACATTGCAATGTTTAAGAAGA
ATGGAATACAATTCTTGAAACTGGGTGGAGGCGGGGATGTGGAATTAGCT
AGGCCAGAATTAATCATGATTCATACTTTTTTACCATTATTAGCAAAAGA
CAAATCTGCAGGTCTATTAGCTGATTTTTATGAATGTTCACTTTTTAAAA
AAATTAGCTTAAGTATATGATTAATCTTAAAGACTTGACTAGCAAAAATT
CAAAATATCTGCAGAATGAAGGCTCAATATTTCATCTCATTAGTAACATC
CGAAACAAATGTAGTAGGTGTGCTCTTTAAGACAGTGTGTTCTCATTCGG
TTTATTGGTCAGAAATTACCCGTGCAATGGCAGCCAGTGCTGAATTGCTG
CAGGGTTTACAATCGCATAATACAAAACAGATACATATTTGTTCCACACT
TGTACTTTGTGGAACTGTTGCAAGGGTCTGGGCGGCTACCCTTCGGCGCC
AGTAGGTGACCTCCATACGACCTTCCCCAACCGAAGTCAGGTATCCATTC
ACACCTGGGTGGATTCAATAATCACTTACGTTTCTGTACCACCACTAGTC
CTACCGTGCGACTGTAAGGCCATACATGATACGGACCCTGCCCTGCCCAG
TGGAATCTACATGGTGTACCCGATGGACGGGCAGCGCGGTTTCCGTGTGT
ACTGTGACATGGACACCGATGGAGGAGGCTGGACGGTAAGATTCAGTTAA
TAATCTGGCAGTGGCGTATGTGCGTACATGTAACTTCCAAATATTTCCTT
AGTCTGATTAAGTTGCATGTTTGTTTGTTTGTGACATTAACTCGATGTTA
AGTCTATCAGCCATAAGGCTGCTTTTCGTAGAAGTCGAAATTCAAGAGGA
GTGTCAAGCGGTCAAATTCTTGGTCAATAGAGTTGACTCAAAATAATACA
AAGAAATAGCAATAATGATAAATAGATAATAGTAACAAACGTTGATTCTT
ATAGTCCTTATGTCCATAATCGTTAGATAAGGGTCAGTTACAGTAGTCTT
TTAAACATTATAACAGTTATACATTCATTAGCCATAGGCCTTCCACAATT
TAGGTAGGTTCCATGGGTCCTAAATATTGGGCATTTATACATCACAAACT
GCACCCCCTTCAACGTCAAGCAATATATAAAAAAACTTGTTCCTGCCATA
CAGCAATACACATGCTACTGTGATAGTTTCTTCTACAACTGGTTGTTTAG
AGGCAATACGTAGCTCTTTAACTTGAGTAATGCCTTAGGTACGTACTCTA
AGTACCTTTCATTTCCTTAGTCACTGACGAAAGACAGCGGATGCTGTCTG
AAACGTCTGACTGTTTAAAGATCTTATCCAGTTGCTTAAGTAACTATTTG
TGGCATATCTTATTGCCTGTGAATGTCTAACCTTCATCAACGTACCTTCC
ATTTTGTTTAAAGTTATCACAACAATCTCACAGGTAATCCAGAGGCGTCT
GGACGGCTCAGTCGACTTCTACCTCGGCTGGGACGACTACAAACGCGGGT
TCCCCAGCGACATGACCGGCGAGTTCTGGCTCGGAAACGACAAGATTCAC
CGCCTGACAGCACAGAAGGCCTACGCGCTGAGGGTGGATCTGATGGCTTA
CGATGGCAACACGACATACGCTGTGTACAACAGTTTCAGCATTGACGACG
AGGCCAACAACTACACACTTGCCATTTCTGGATACAGTGGAACTGCAGGT
GAGTATATACACGACATAAATATAAATGCTTGTGGAAGGTTCTAAATTGT
ATCTAGTAGTTATGGAGAGGTTCGTAATGTGATTTGTAAAGAAAAACCAC
AGTCGACAATTTCTAAAAGAAGACCTTACCTTAGACCTTATATCCTCCCG
CAACTCTGTTGCGGCAGTTGATAAACAGAAGTGATGTTATCTCCATAAAG
ATCAAGCTGGCATTCTTCATTGAAAAAGAAAAAGATTTCGTATCCTCAAA
AAATCTAACGTTACATGTGCACAATCTTCTAGTGGCACATCATCCCTTTT
TGAATATATCTGCAGCCTTTGCATTTATACTAATGAGCAAATAGACAGTA
CTATTTTAGTTGCAATGCACCTTTGTCCGTCAGTTTACTGACAAGAGCTT
TTGTCCTTTCCTTCAGGGGACGCTATAACAGCACAACAAGAAGGCCACAA
TCTAGATGGTCAAGCGTTTACAACCTACGATAGAGACAACGATCCATGGG
ATGAAAATTGCGCCGTTCGTTTTATGGGTGCCTGGTGGTACTGCGCATGT
CACGATTCTAACCTGAACGGAATGTATGGCAACGATAAATATGGAAAGGG
GGTCGTTTGGAAACAGTTCAGAGGGTTTGAAGAATCTCTGAAGTTCACTG
AAATGAAAATACGACCCTCTGACTAAACTCAGAAATGATTCTTGCAGAAA
TGTGACTGGCGAAAAAGATACAGACTCTATTCCTGTATAATTCCTTTTCT
TCCAAACTATTTATGACTGCCCCCTGCACTC

Coding sequence (CDS) from alignment at xpSc0039742:3088..18318-

>Blg01640.3 ID=Blg01640.3|Name=Blg01640.3|organism=Branchiostoma lanceolatum|type=CDS|length=3354bp|location=Sequence derived from alignment at xpSc0039742:3088..18318- (Branchiostoma lanceolatum)
ATGCTTGTTACAGTCATCTGTCCCGATGGGTTTGAGGTCATTGACGGGTC
ATGCTACTATTTCTCGGACGAGAAGAAAGAGATTGATGAGGCGAAGTGGG
ACTGTGACTACCTAGGAGGCTCCTTGGCCACATTTGACGACTGTGATACC
ATCTATACAGTTACATCAAGTGCCGAGCCTTGCCCGTACTGGATCAATCC
TTCTACTTCTACTGACTGTGTGGATCCATATCCACCAGACTATTACTACA
AGTACATCTGCGAAATCCCCAAAGAGACAGAATGTGAAAAATACTGTAAG
GGTAAGTGTTGGAAGGAGGGGAATATCGGCTGTGCTGGGCCGGTTGGCCA
GCGGGCCCCTGCAGACTCCCAATGCACCTGTCCAGAAGGCCACTTTTGCT
GTGTGCCAAGAGGCCCACGTGGGGAGATCGAGCCAACCTGCCCAATGACC
TGTGAAGGAGAGTGTCGGTACCCTGATCCAGACCTGGACGATGGAGGTTG
TGACGGACAGTGGAAGGACGCTGACGAGTGTCCATGTCCATACGAAACGC
GCTGCTGTTGTAAAAAAGAGTCGCAATGTGAGGAATACTGTGACGGCAAG
TGTCTGTATGAGGATGCGGATTGTAGTGGAGACTACCAGTGGGCCCCTCT
AGGGTCCAATTGCTCCTGCCCGGAAAACAAGCGTTGCTGTGTGCCAAAAA
TGCCCAGCTGCAGAGTGACCTGTCAAGGAGAGTGTCTGTATCCCAACCCA
GAGTTGCAAAACGAAGGATGTGATGGAACATGGAAGAGCCTTGAGGAGTG
CCCCTGTGGATATGGCGGGCGCTGCTGTTGTAAAGACGAGTCTACAGAGC
TTCCTACTCCTACACCATGTCCACAGCCGCCACCGCCGTTTTCCATAGAT
GAGCATGGTTGCGGACTGCCCGAAATGGCAGCCCTACCTGACGATAAAGC
TTTCGACTTTGAAGCCATGTACGAGTCTCTGCAGTACTATGAATCTGATC
CGTACGCGGGTGAGACAAAATTCGATCAGGTCAAAGAACAGTTTGAGAAA
TTGAGTTACCAAGATGGAGAAAGCCTGTCCGGCATGACAGGAGATCTCAC
AGATGCCATCAAGGCCATGAAGAACGTCTGGGTGTTGCAGTACACCGACT
CTGGGACTGGCTACGAGATTGCCATTCTCCTTCAAGACTTTGACCCTCGA
ACAGGGATGCTGCCAGATGATCTAGACTTCTCGGGTCTTTCTTTGGGCTA
TGATTTTAAAGAGAAATTGCACCTCTTGAAAGAGCGATACAAAGAATTGC
AGCTTAATGTGCATATCCCAGACTTCATCCCAGACTGTGAAATTGTAATT
GAAATTAAACTGAATTCATATTTCAGTCTTGTTAGGGTGCCCCTAGTTCT
CGTGGCCTGCATTCAAATAGAGTGCGAAGCGGTGATTATAATTCCCGTGG
TTTGCTACTCTCAAACCTGGGTCTGGTACGGTGAGCCGTATTGTGAGTGG
GTTTTGGTGACAAGAATCTACGTCAAGCAGCTGATCATACACATCACCTT
CTGGGTCAGGTATTGGTGGATCACCGCATTCCCTCCGTGGGCAGTACAAC
CACTTCCAGAGTGTCCTGAACCTGGCATGGGTGACATAGCCCCTTATGAA
GGGTACCGACCAGAATTTGTAGAGATGGCAATGGACAACTTCAGGTCTTC
AGTGTCTGAAGACATGGCAGCAGAACTTCGAGTAGACAAGTTCAGGTTTG
TGTATCAAGAGGAATTGGGGGGTCAGAGTGATTCCGCACTCTCGAGTATG
GAGGGCGCCGTGACAGACGCGGTAAACGGCTTCAAGGACAAGTGGATCCT
GACGTACAAGGAATCAGAAGACGACATGGAGTCCAGCATGCTGCTAGATG
ACTTTGATCCTACAGCTGACGAGTTGCCCAACGAGATTCAACTCGGCGAT
CTCTCCGACTTCCCTTCGTACAACGAGCGCTACCTTCGCCAATTCCAGTA
CCGGTACATGGAGATGAGGCAGACGGTATCTCTCCAGTCTGTCATCCCGA
CCAACTGCGGCACCGCGCTCCACTCCATACGGCTCGACGCGCGCTTCACC
CTGCGAAGGCTACCGTTCTTCCTCATGGCTTGCTGGGAAATTCATTTTAG
AGAATTTCTCATTATCCCAGTCCCATGTTTTGAGGTCTACATCATCTGTG
GCATAAAAGTGGTGATACCTGTAATCAAAGTCATAATCATACGTCGAGAT
TTCTGGTTCGGCATTTGGGTCTTCATCCCACTACCAGATTGCCCATTCCC
ACCAGCAGCACAACCAGGCTCTGTCATCGCATTTGGGAGCCCAACTGGTC
TCAACCATCTGGATACGTGCACATACAGGTGTCTTCCAGGCTTTGAAAGA
TGCAAGGGTGTCAATACACTTATCTGTTGGAAAGGACAGTGGCGGCCACA
GCGCTGGCAGCTGCTATGTGAACCAACATGTCCTGCAGCTCCCGCCGCAG
GATTTGGGGCAGTCCGTGCCGTCTGCATATACAAAGCAAACTTTTTCTTT
TGGGGTGGGGTAAAAGAAGTTTGTGTGTACAGTTGTCTCAAAGGTTGGAG
CCGCTGGAAGGGGTCATTTGTTCGGACCTGTCGTAAGGGTATATGGACTG
GATCACCCCTAGTCTGCCTACCGCCATGGATCCCTTGGCCTATCCTACCG
TGCGACTGTAAGGCCATACATGATACGGACCCTGCCCTGCCCAGTGGAAT
CTACATGGTGTACCCGATGGACGGGCAGCGCGGTTTCCGTGTGTACTGTG
ACATGGACACCGATGGAGGAGGCTGGACGGTAATCCAGAGGCGTCTGGAC
GGCTCAGTCGACTTCTACCTCGGCTGGGACGACTACAAACGCGGGTTCCC
CAGCGACATGACCGGCGAGTTCTGGCTCGGAAACGACAAGATTCACCGCC
TGACAGCACAGAAGGCCTACGCGCTGAGGGTGGATCTGATGGCTTACGAT
GGCAACACGACATACGCTGTGTACAACAGTTTCAGCATTGACGACGAGGC
CAACAACTACACACTTGCCATTTCTGGATACAGTGGAACTGCAGGGGACG
CTATAACAGCACAACAAGAAGGCCACAATCTAGATGGTCAAGCGTTTACA
ACCTACGATAGAGACAACGATCCATGGGATGAAAATTGCGCCGTTCGTTT
TATGGGTGCCTGGTGGTACTGCGCATGTCACGATTCTAACCTGAACGGAA
TGTATGGCAACGATAAATATGGAAAGGGGGTCGTTTGGAAACAGTTCAGA
GGGTTTGAAGAATCTCTGAAGTTCACTGAAATGAAAATACGACCCTCTGA
CTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01640.3-exon-xpSc0039742-1570713199:18084..18318Blg01640.3-exon-xpSc0039742-1570713199:18084..18318Branchiostoma lanceolatumexon
Blg01640.3-exon-xpSc0039742-1570713199:17266..17316Blg01640.3-exon-xpSc0039742-1570713199:17266..17316Branchiostoma lanceolatumexon
Blg01640.3-exon-xpSc0039742-1570713199:16305..16342Blg01640.3-exon-xpSc0039742-1570713199:16305..16342Branchiostoma lanceolatumexon
Blg01640.3-exon-xpSc0039742-1570713199:15079..15372Blg01640.3-exon-xpSc0039742-1570713199:15079..15372Branchiostoma lanceolatumexon
Blg01640.3-exon-xpSc0039742-1570713199:13994..14263Blg01640.3-exon-xpSc0039742-1570713199:13994..14263Branchiostoma lanceolatumexon
Blg01640.3-exon-xpSc0039742-1570713199:13287..13355Blg01640.3-exon-xpSc0039742-1570713199:13287..13355Branchiostoma lanceolatumexon
Blg01640.3-exon-xpSc0039742-1570713199:12574..12615Blg01640.3-exon-xpSc0039742-1570713199:12574..12615Branchiostoma lanceolatumexon
Blg01640.3-exon-xpSc0039742-1570713199:11386..11640Blg01640.3-exon-xpSc0039742-1570713199:11386..11640Branchiostoma lanceolatumexon
Blg01640.3-exon-xpSc0039742-1570713199:9980..10384Blg01640.3-exon-xpSc0039742-1570713199:9980..10384Branchiostoma lanceolatumexon
Blg01640.3-exon-xpSc0039742-1570713199:9398..9439Blg01640.3-exon-xpSc0039742-1570713199:9398..9439Branchiostoma lanceolatumexon
Blg01640.3-exon-xpSc0039742-1570713199:8149..8412Blg01640.3-exon-xpSc0039742-1570713199:8149..8412Branchiostoma lanceolatumexon
Blg01640.3-exon-xpSc0039742-1570713199:6981..7352Blg01640.3-exon-xpSc0039742-1570713199:6981..7352Branchiostoma lanceolatumexon
Blg01640.3-exon-xpSc0039742-1570713199:6365..6550Blg01640.3-exon-xpSc0039742-1570713199:6365..6550Branchiostoma lanceolatumexon
Blg01640.3-exon-xpSc0039742-1570713199:5598..5816Blg01640.3-exon-xpSc0039742-1570713199:5598..5816Branchiostoma lanceolatumexon
Blg01640.3-exon-xpSc0039742-1570713199:4884..5020Blg01640.3-exon-xpSc0039742-1570713199:4884..5020Branchiostoma lanceolatumexon
Blg01640.3-exon-xpSc0039742-1570713199:3871..4135Blg01640.3-exon-xpSc0039742-1570713199:3871..4135Branchiostoma lanceolatumexon
Blg01640.3-exon-xpSc0039742-1570713199:3088..3452Blg01640.3-exon-xpSc0039742-1570713199:3088..3452Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01640.3Blg01640.3-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
xpSc0039742genomexpSc0039742:3088..18318 -
Properties
Property NameValue
GeneIDBlg01640