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Sequence
The following sequences are available for this feature:
mRNA from alignment at xpSc0039704:51418..56299- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01643.0 ID=Blg01643.0|Name=Blg01643.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4882bp|location=Sequence derived from alignment at xpSc0039704:51418..56299- (Branchiostoma lanceolatum)
ATGGTCCTGAGCTCCTCATCACTGCTCATGATGTACGTGTCTCTGTTTCA
TCCCCCAGGCGCGGCCTCCATGAACACAGCGATGGTCCTGAGCTCCTCAT
CACTGCTCATGATGTACGTGTCTCTGTTTCATCCCCCAGGCGCGGCCTCC
ATGAACACAGCGATGGTCCTGAGCTCCTCATCACTGCTCATGATGTACGT
GTCTCTGTTTCATCCCCCAGGCGCGGCCTCCATGAACACAGCGATGGTCC
TGAGCTCCTCATCACTGCTCATGATGTACGTGTCTCTGTTTCATCCCCCA
GGCGCGGCCTCCATGAACACAGCGATGGTCCTGAGCTCCTCATCACTGCT
CATGATGTACGTGTCTCTGTTTCATCCCCCAGGCGCGGCCTCCATGAACA
CAGCGATGGTCCTGAGCTCCTCATCACTGCTCATGATGTACGTGTCTCTG
TTTCATCCCCCAGGCGCGGCCTCCATGAACACAGCGATGGTCCTGAGCTC
CTCATCACTGCTCATGATGTACGTGTCTCTGTTTCATCCCCCAGGCGCGG
CCTCCATGAACACAGCGATGGTCCTGAGCTCCTCATCACTGCTCATGATG
TACGTGTCTCTGTTTCATCCCCCAGGCGCGGCCTCCATGAACACAGCGAT
GGTCCTGAGCTCCTCATCACTGCTCATGATGTACGTGTCTCTGTTTCATC
CCCCAGGCGCGGCCTCCATGAACACAGCGATGGTCCTGAGCTCCTCATCA
CTGCTCATGATGTACGTGTCTCTGTTTCATCCCCCAGGCGCGGCCTCCAT
GAACACAGCGATGGTCCTGAGCTCCTCATCACTGCTCATGATGTACGTGT
CTCTGTTTCATCCCCCAGGCGCGGCCTCCATGAACACAGCGATGGTCCTG
AGCTCCTCATCACTGCTCATGATGTACGTGTCTCTGTTTCATCCCCCAGG
CGCGGCCTCCATGAACACAGCGATGGTCCTGAGCTCCTGGTCGCACTGCT
CTTTGGAACAGGTGGCTGCCGCGGCTCCGCGGGGGGTCCGCTGGTTCTAC
CTGCTGTTCTACCGAGACCGAGGCCGGATGAAGCGGCTCCTGGAACGGGC
AGAGCGGGCGGGCTACACCGCCATAGTCCTCACCGTGGACCAGCCCTTAT
TCAATTTTGATGGAAACGTGAGGACTGAACCGCTTCCTATCCAAATCAGG
TTGAAGTTTATTTCCTTTTTTATCTTCTTTCATAATTCTCATCTTAATTA
CAAACTATTTAGTTAAAACTTTGTTCAAATATAAACAATTAGCTTATCGA
ATCTGCCGCTGCCCTATTGCCACTGCATTCTGTATGAAAATCAAAATGAC
CAACCAGCTAGATCACGATCACGCGTTATTAACATCATCTAGTCGTGACG
GTCTTACGGGTGCTTATGGTCATAAGCGATAGAAATTTAATGTTGTGTTT
TTAGCGATAGCGTAATTATTTTACTACTTATGTTTCGCAGTATGCTTTTG
CTTCTCATATGTGCAATATTGCTGAACAGCAGTTTACAATGATTCCTTTT
TTCTCAAGTTTGCCAAATATCTGGTTAGATGACGCCGCTCATGGACAACC
AGGTACTGCCGAACACGTGGCGTATCTTAAGAAAGTTGTGAAGGAGGCGG
CGACTTGGGAAGACGTTGAGTGGGTGAGAACAACACCCGGCTGCCGGTCG
TGCTGAAAGGGATTCTCTCAGGTAGTATATCACTGCACGAAATGGCCTCG
GATCCTGACGAATCCTGAAGTATTCTGACGTGATCCGGAAGCTAAGATCT
GGAAGAATCCTAATGGATCCGGGACCTTATATTTCTCGGCAGGCTTATGC
GCATCCAAATATTGGGACTCAAGGTACCAGTACTTACACAACTTGTGTAA
GTACGTACTTACACAACTCAAATATGCAAGTGGTACCTTGAGTCCCAATA
TTTGTACGCCCATTAGCCGGCCTGCCGAGAAATATACGGCTCCGGATCCG
TTCGGATTCTTCCGGATCTCTTCAGGATCTTAGGTTCCAGATCACGTCAG
GATACGTCAGGATACGTCAGGATCCGAGGCCATTTCGTACAGTGTATGTA
GAAGCCTTTTCTCTAAATACGCCAAAAAAAGCAGTTACTCAAACAACTGA
ATATGGTTTTGGAAACGGTCAGACGTTTTAAGTAGCATCCACTACTTTTC
GTCAGTGATTGTGAGCAAGATTAGTCGAACAGCAGATTTATAACCACGAA
CTATGGATTGATATCTAATAAAAAGCAAATTAGACAAGTCAAGACAAGGT
GGAAGTCCTATTGTTTTAATATAGGATCTGATATAAAGCTGGTTTGCCGT
CAAGGCTTGGTCCCAAGTGCCAGACATCTTCTCTAAATATAGACTTGCAA
AAAGAAAAGAAAGGTAAAGGTATAGGTAGTAATAATGTCTCAAATTGTTT
TTAGTAAAAGAAGGCTAACTTTCCATTCAGACGTTTTACACAGTCTTACA
CCATGAAAAAGAAATGTTTTATTGATTGATTGATTAGTGATTAATTAGCT
AATCTGAATATTACATTTAGCTGATGATGCGAGGATTGCAGTGATCAATT
TAGTATTGATAAAGTAGCTTATATTGATCGCGTAATCGATTAGCGATATG
GACAAATCAATAGGCATTATTCAGCTGAACATGCAGGGAACGCTGTAAAT
ATGTCTCTATCTAGACAAAGTTATATATAATCGGTTTGTTGATCAGTCGA
TTGATTAATTGATTGATTAATTGATTGTTAAGTGATTGATTTCTGATTAA
ACACATTGTTCAGCTGAAGACGCGAGGATCGCAGTGGACCTGGGTGTTTC
CGGGATCTACGTGTCCAACCACGGCGGGAGGCAACAGGACGGAGTGCCGG
CAACAGTAAGTTCTAGTGCTGCGGGTACTGTGTACCGGTACTGTACCGTG
AAAATCGAGTAGGTATAGGTCCAAAATACGGGATCATGAAGTACCGGCAG
GTAGCGTGCGTAGTCCAGTGGTTAGCGATCTTGCCTCTGGAACTAGAAGC
CCCGGGTTCGATCCCGGCTGTGTTGCTCACCCGACATGCACGCTACCGGA
AAGGGTCGTAGTCCTTAGGACGGGACGTTAAGCCGCGTGGTCTACTGTTC
ATTGTGTTATTCGAAAAGAGCTAGGGGAATTTCCCCGGTACAATGAACCT
GTAATTACTGTACATAGCGTCTGTCTTCTTCTCTGTCACGACCAGTGGAA
GATTAGCTCTTCGGTGAGCTAAACTGGATGGAGATTACTTTACTTTACTT
TACCGGTACAGTACCGATATAAATCTACACCAAGTCTATGTTTATTTTGT
GACTGATCTCCTAACCTCATATCTTCAAGCAACACCAAACATGACCTAAG
TGACACATTAGAACAGCGTTACTAATATGCGACAGATCATTCATGGCCAT
GTAATTTCGTTTACGGATGACTTTTTTTCGAAGATTGACGTTCTCCCCGA
CATCGTCCGCGCGGTTGGCGGCGAGGCGGAGGTTTACCTGGACGGAGGGG
TCCGGACTGGGACGGACGTGCTGAAGGCCTTGGCGCTGGGGGCCAGATGT
GTGTTCATCGGCAGGCCCGTACTCTGGGGACTCGCTTGCAACGTAAGCAT
TGCCAGTTCCACGATAAACCATTTGAGCAGCTTAATGCAAAGTTGCCTGG
GTGCCATCCTATTTCTACCTGGGCTCCTACACTCGCTACCCTAAAAAATA
AAACGAGTGTAGGAGCCCGGTAGAAATAAGATGGCACCCAGGCTAGCTTA
ATGCAACTTAAGACAATTTAAGCGTGGTAATTGTGGGATGTTTGGCATAT
GTACAGACACTGAAACATGTATTGTAACTTTGTACATTACTTCCTGTAAA
CATTAGGGTGCCGAAGGCGTTCAGCAGGTTCTGCAGATCCTGAAGGATGA
ACTCAGTCTGACCATGGCCAGGGCGGGTATGTATGATCAGGCCGTATCAC
AGTTACATGCTTAACCCTTAAGCTGCCAGGTTTTTTAGCCAAGTAAAAAT
CAAAAATGTTTGACCCCTGACCTCCCTCACGAAACCCGCGAAACACCCGG
CGGCGCTAACTCCCCTAACTTCCCGGCTTCGCGCGCTACACGCACGCAAA
GCTGTTTTGTTCTGGGGAATACCCTATCCCGGTTATAACCGGGTCCAGCA
CACAAGGCATATTTCTGTATCCCTAATTAAGTCGGGACTGGCAGCTAAAA
TCTCTTCCACATTCCTCTTTGTAAATACGTTCAAGCAGAATTGCAGACGA
TGTTTAGTGCTTACTTTTTTGCCGTATTAAGTACGTTATTGTTAACAGTG
TTTTCTTTTCATCATTCCAGGCTGTGCGAAGATATCAGACATTCAGCCGT
CACTAGTTGTGCACCAGTCATACTATGGTGTACTACCGCTGGCTAAGTAT
TAAGCTGTAGGACCCAAGTCCTGCTGAGCCCGATAATTGTCGGTTTGCAC
ATGATGGTTCTTTATGCTAGCACTGACAATTGTCGGTTTGAGGGTATTTT
TAATATTTGCAGTATGGACAAATGAACAGACATTAATTGCACCATTGTTC
CGTAAGATAAAATAGTATGCCAGCAATTTGAGTATAAATCAATTCCCAGC
TGTTTAAAGTACGATTCTAAGAAGGATTTGTAAAGTTGTACTACGCTTTT
TTCCTAGTCGCTCACTACAATTTTATACATGTTTTAAATAAAGTTACATT
GTGTAATCGGTAAATAGTCTTTAAACAATGACATTTCTATACTTTGCCAA
TGCACTCTTCCCCAAATACTGTTTCTTTAAACTATGATATCAGACCGATG
CAGTTGTAAACTCTTTAACCATTAACATTCCC Coding sequence (CDS) from alignment at xpSc0039704:51418..56299- >Blg01643.0 ID=Blg01643.0|Name=Blg01643.0|organism=Branchiostoma lanceolatum|type=CDS|length=1698bp|location=Sequence derived from alignment at xpSc0039704:51418..56299- (Branchiostoma lanceolatum)
ATGGTCCTGAGCTCCTCATCACTGCTCATGATGTACGTGTCTCTGTTTCA
TCCCCCAGGCGCGGCCTCCATGAACACAGCGATGGTCCTGAGCTCCTCAT
CACTGCTCATGATGTACGTGTCTCTGTTTCATCCCCCAGGCGCGGCCTCC
ATGAACACAGCGATGGTCCTGAGCTCCTCATCACTGCTCATGATGTACGT
GTCTCTGTTTCATCCCCCAGGCGCGGCCTCCATGAACACAGCGATGGTCC
TGAGCTCCTCATCACTGCTCATGATGTACGTGTCTCTGTTTCATCCCCCA
GGCGCGGCCTCCATGAACACAGCGATGGTCCTGAGCTCCTCATCACTGCT
CATGATGTACGTGTCTCTGTTTCATCCCCCAGGCGCGGCCTCCATGAACA
CAGCGATGGTCCTGAGCTCCTCATCACTGCTCATGATGTACGTGTCTCTG
TTTCATCCCCCAGGCGCGGCCTCCATGAACACAGCGATGGTCCTGAGCTC
CTCATCACTGCTCATGATGTACGTGTCTCTGTTTCATCCCCCAGGCGCGG
CCTCCATGAACACAGCGATGGTCCTGAGCTCCTCATCACTGCTCATGATG
TACGTGTCTCTGTTTCATCCCCCAGGCGCGGCCTCCATGAACACAGCGAT
GGTCCTGAGCTCCTCATCACTGCTCATGATGTACGTGTCTCTGTTTCATC
CCCCAGGCGCGGCCTCCATGAACACAGCGATGGTCCTGAGCTCCTCATCA
CTGCTCATGATGTACGTGTCTCTGTTTCATCCCCCAGGCGCGGCCTCCAT
GAACACAGCGATGGTCCTGAGCTCCTCATCACTGCTCATGATGTACGTGT
CTCTGTTTCATCCCCCAGGCGCGGCCTCCATGAACACAGCGATGGTCCTG
AGCTCCTCATCACTGCTCATGATGTACGTGTCTCTGTTTCATCCCCCAGG
CGCGGCCTCCATGAACACAGCGATGGTCCTGAGCTCCTGGTCGCACTGCT
CTTTGGAACAGGTGGCTGCCGCGGCTCCGCGGGGGGTCCGCTGGTTCTAC
CTGCTGTTCTACCGAGACCGAGGCCGGATGAAGCGGCTCCTGGAACGGGC
AGAGCGGGCGGGCTACACCGCCATAGTCCTCACCGTGGACCAGCCCTTAT
TCAATTTTGATGGAAACCCGGCCTGCCGAGAAATATACGGCTCCGGATCC
GTTCGGATTCTTCCGGATCTCTTCAGGATCTTAGGTTCCAGATCACGTCA
GGATACGTCAGGATACGTCAGGATCCGAGGCCATTTCGTACAGTCTGAAG
ACGCGAGGATCGCAGTGGACCTGGGTGTTTCCGGGATCTACGTGTCCAAC
CACGGCGGGAGGCAACAGGACGGAGTGCCGGCAACAATTGACGTTCTCCC
CGACATCGTCCGCGCGGTTGGCGGCGAGGCGGAGGTTTACCTGGACGGAG
GGGTCCGGACTGGGACGGACGTGCTGAAGGCCTTGGCGCTGGGGGCCAGA
TGTGTGTTCATCGGCAGGCCCGTACTCTGGGGACTCGCTTGCAACGGTGC
CGAAGGCGTTCAGCAGGTTCTGCAGATCCTGAAGGATGAACTCAGTCTGA
CCATGGCCAGGGCGGGCTGTGCGAAGATATCAGACATTCAGCCGTCACTA
GTTGTGCACCAGTCATACTATGGTGTACTACCGCTGGCTAAGTATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01643.0-exon-xpSc0039704-1570713199:55133..56299 | Blg01643.0-exon-xpSc0039704-1570713199:55133..56299 | Branchiostoma lanceolatum | exon |
| Blg01643.0-exon-xpSc0039704-1570713199:54207..54333 | Blg01643.0-exon-xpSc0039704-1570713199:54207..54333 | Branchiostoma lanceolatum | exon |
| Blg01643.0-exon-xpSc0039704-1570713199:53395..53486 | Blg01643.0-exon-xpSc0039704-1570713199:53395..53486 | Branchiostoma lanceolatum | exon |
| Blg01643.0-exon-xpSc0039704-1570713199:52658..52816 | Blg01643.0-exon-xpSc0039704-1570713199:52658..52816 | Branchiostoma lanceolatum | exon |
| Blg01643.0-exon-xpSc0039704-1570713199:52324..52393 | Blg01643.0-exon-xpSc0039704-1570713199:52324..52393 | Branchiostoma lanceolatum | exon |
| Blg01643.0-exon-xpSc0039704-1570713199:51418..51929 | Blg01643.0-exon-xpSc0039704-1570713199:51418..51929 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0039704 | genome | xpSc0039704:51418..56299 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01643 |
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